Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo11g00564 ATGTCTGGCCCCGCAGAATGCTACGCCTGCACACAGGTTGGCGTTCCCTCGTTTCACTCCACCAGCTGTGACCGAGCGAACCAGCCGGAATGGGAGGCCTCCGCCGGGTCCTCCCTCGTACCCATCAAAAACAAGAAGGACCAGAGCCAAGAGACACGAACCCAGAGACCATCTGGCTGTTTCGGGCCGGTACGGGACCCGAGAAGTAAGCAGGTCCGGAGATGGAACAGAGCGATCTTATTGGCTCGTGGCATGGCCTTAGCCGTCGATCCACTTTTCTTCTACGCGCTGTCGATCGGACGAGGAGGAACCCCTTGCCTGTTCATGGACGGTGGATTAGCCGCAATCGTGACCGTAATTCGCACGTGTGTGGACGTCCTCCATCTCTGCCACATATGGTTCCAGTTCCGGACGGCGTACGTGTCGAGGGAGTCTCTGGTTGTAGGCTGCGGGAAACTCGTGTGGGACGCACGCGCCGTCGCTCTGCACTACCTCCGGTCGTTCAAAGGCTTCTGGTTCGACGCCTTCGTCATAATCCCAGTTCCTCAGGCAGTGTTTTGGCTGGTATTGCCGAAATTGATAAGGGAAGAGAGGATAAAGGTGATAATGACGGTGCTGTTGATGATGTTCATGTTCCAATTTCTACCGAAGGTTTACCACTGCATCTACATGATGAGGAGGATGCAGAAGGTGACTGGCTACATCTTTGGTACCATTTGGTGGGGTTTTGGCCTTAATCTCATTGCCTATTTCATTGCTTCTCATGTTGCAGGTGGTTGCTGGTACGTTCTCGCGATACAGCGAGTAGCTTCGTGTCTGCAGCAGCACTGCCGCAGACATGGCTGCAATCTCTCCTTGTCTTGCTCCGAAGAGATTTGTTATCAATCTCTTCTACCTGCCAATTCCATTGGCAATTTTTGCGGCGGAAATTCGACAGCGACTGCAGTCAGAAAGCCTTTATGCTTGGACGAGCATGGATCCTTCCGCTTCGGCATATATCAGTGGGCTCTTCCTGTTATTTCCAGTAATTCTGTTGTTGTTAAGGTGCTTTATCCCATATTTTGGGGCTTAATGACTCTCAGCACCTTTGGTAATGATCTAGAGCCTACGAGTAATTGGCTGGAAGTGATATTCAGTATTTGCCTTGTGTTGAGTGGACTACTGTTGTTCACTCTGTTGATCGGGAATATCCAGGTATTTTTGCACGCTGTGATGGCGAAAAAGAGAAAAATGCAGCTGAGATGTCGAGACATGGAATGGTGGATGCGAAGAAGACAGTTGCCGTTTCGTTTGAGACAAAGAGTTCGCCATTACGAACACCAAAGATGGGTGGTTCTGGGAGGAGAAGACGAAATGTCTCTGATCAAGGACTTACCCGACGGCCTTCGTCGAGACATTAAACAATTTCTTTGCTTGGACCTGATCAAACATGTACCTCTATTCCATGACTTGGACGATCTGATTCTCGATAACATCTGTGATAGGGTTACCCCACTCGTCTTCTCCAAAGATGAAAAGATTATAAGAGAAGGAGATCCAGTGGCAAGAATGCTATTCATCATTCGTGGTCGAATCAAGCGCAGCCAAAGCCTCAGCAAGGGAGTGATAGCCACAAGCATGCTTGACCAGGGAGGATTCTTTGGCGATGAGCTCTTATCCTGGTGCCTCCGTCGCCCTTTCATTGATCGGCTTCCAGCCTCATCAGCAACATTTGTTTGTGTCGATCCAACAGAAGCATTTGGCCTCGATGCAGCCCATCTTCGATTCATCACTGATCATTTTCGCTATAAGTTTGCCAACGAGAGGCTCAAAAGAACAGCAAGGTACTACTCTTCCAATTGGAGAACATGGGCTGCAGTGATTATACAATTTGCATATCGTCGTCACAAATCAAAAATTCGAGGTCCAGTGATAATTGTGCCAGAGATTGAAGATTCTGACCGTCGGCTTTTGCAATCATCTACAGAAAAGAAAAGAGTGGATGAGAGCCAGAACTTGACCCTAGATGCTATACGACACTCGTTAATTCGTCAAGAAGATAGTATAATATTCAGTCTACTAGAGAGAGCCCAGTACTGTTATAATGCCGACACATACGACCCCAGTGCATTTTCTATGGAGGGTTTCCATGGCTCTTTGGTCGAGTTTATCCTTAAGGAAACCGAAAAGCTTCATGCTCAGGTGGGACGATACAGGAGCCCTGATGAGCATCCTTTCTTTTCAGATGATCTTCCTAACCCAATGCTGCCTCCCCTCCAATATCCAAAGGTACTTCATCCCTATGCTGACTTGATAAACATCAATTCCAAAGTTTGGGAAGTGTATTTTAGGGATCTGATTCCAAGATTAGTTAAGGATGGAAACGATGGAAATTGTGGATCAACTGCTCTTTGTGATGCTATGTGTCTGCAGGCACTGTCGAAGAGAATCCACTTCGGAAAATTTGTCGCAGAGGCGAAATTTCGATCCCAACCAGAGGCCTACGAAGCTGCAATTAGAGCACAAGACGAGGAGAAATTGATGGATATGCTTACATACCCAACTGTGGAAGAAGTTGTAAAAGAGAGAGTTGAGACGAAAGCAAGAGCTTATGGGGGAGAGGTGAAGATAAACATGGAGGAAAATCATTCCTGCCCAGCTTATAAAATCAATCCAGGCTTGGTTGCTGATCTTTATGGTGATTGGATCATGCCTTTAACAAAGCAAGTTCAAGTTCAGTACTTGCTCAGAAGATTGGACTGA 2742 47.45 MSGPAECYACTQVGVPSFHSTSCDRANQPEWEASAGSSLVPIKNKKDQSQETRTQRPSGCFGPVRDPRSKQVRRWNRAILLARGMALAVDPLFFYALSIGRGGTPCLFMDGGLAAIVTVIRTCVDVLHLCHIWFQFRTAYVSRESLVVGCGKLVWDARAVALHYLRSFKGFWFDAFVIIPVPQAVFWLVLPKLIREERIKVIMTVLLMMFMFQFLPKVYHCIYMMRRMQKVTGYIFGTIWWGFGLNLIAYFIASHVAGGCWYVLAIQRVASCLQQHCRRHGCNLSLSCSEEICYQSLLPANSIGNFCGGNSTATAVRKPLCLDEHGSFRFGIYQWALPVISSNSVVVKVLYPIFWGLMTLSTFGNDLEPTSNWLEVIFSICLVLSGLLLFTLLIGNIQVFLHAVMAKKRKMQLRCRDMEWWMRRRQLPFRLRQRVRHYEHQRWVVLGGEDEMSLIKDLPDGLRRDIKQFLCLDLIKHVPLFHDLDDLILDNICDRVTPLVFSKDEKIIREGDPVARMLFIIRGRIKRSQSLSKGVIATSMLDQGGFFGDELLSWCLRRPFIDRLPASSATFVCVDPTEAFGLDAAHLRFITDHFRYKFANERLKRTARYYSSNWRTWAAVIIQFAYRRHKSKIRGPVIIVPEIEDSDRRLLQSSTEKKRVDESQNLTLDAIRHSLIRQEDSIIFSLLERAQYCYNADTYDPSAFSMEGFHGSLVEFILKETEKLHAQVGRYRSPDEHPFFSDDLPNPMLPPLQYPKVLHPYADLININSKVWEVYFRDLIPRLVKDGNDGNCGSTALCDAMCLQALSKRIHFGKFVAEAKFRSQPEAYEAAIRAQDEEKLMDMLTYPTVEEVVKERVETKARAYGGEVKINMEENHSCPAYKINPGLVADLYGDWIMPLTKQVQVQYLLRRLD 913
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 5370958 5379641 + BLOR03440 Blo11g00564 66764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo11g00564 913 ProSiteProfiles cAMP/cGMP binding motif profile. 480 559 IPR000595 -
Blo11g00564 913 SUPERFAMILY cAMP-binding domain-like 407 594 IPR018490 -
Blo11g00564 913 SUPERFAMILY Chorismate mutase II 659 913 IPR036263 GO:0046417
Blo11g00564 913 Gene3D Chorismate mutase, AroQ class superfamily, eukaryotic 659 913 IPR037039 GO:0004106|GO:0009073
Blo11g00564 913 ProSiteProfiles Chorismate mutase domain profile. 659 913 IPR008238 GO:0004106|GO:0009073
Blo11g00564 913 SUPERFAMILY Voltage-gated potassium channels 67 401 - -
Blo11g00564 913 Gene3D Helix hairpin bin 406 471 - -
Blo11g00564 913 SMART cnmp_10 480 606 IPR000595 -
Blo11g00564 913 CDD CAP_ED 480 590 IPR000595 -
Blo11g00564 913 Gene3D Jelly Rolls 478 596 IPR014710 -
Blo11g00564 913 Pfam Ion transport protein 75 398 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Blo11g00564 913 TIGRFAM CM_pl-yst: chorismate mutase 666 913 IPR008238 GO:0004106|GO:0009073
Blo11g00564 913 Gene3D - 106 403 - -
Blo11g00564 913 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 2-LIKE 14 651 - -
Blo11g00564 913 MobiDBLite consensus disorder prediction 42 66 - -
Blo11g00564 913 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 14 651 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo11g00564 Blo-Chr11:5370958 Blo14g00625 Blo-Chr14:11893334 5.01E-126 dispersed
Blo07g00935 Blo-Chr7:28557646 Blo11g00564 Blo-Chr11:5370958 0 transposed
Blo10g00146 Blo-Chr10:1677898 Blo11g00564 Blo-Chr11:5370958 2.03E-156 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo11g00564 K05391 - jre:108987412 1086.63