Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo11g00585 ATGGCTGTGACGAATAGTGCAACTAAGTCGCCGGAGGGCGAGATAGATCGAACGGCAGTCGAGGTTTTACCGATCAAGGCTTTACCCTTCAGTAATGGTGTTTTGAAGAGGCAGAATCCTCAGAGTCATCATCATCGTCACCACCTCAGCTCTGCCGCTAACTCCTCCGTCGTTTCCTACAAAGAATGTCTGAAAAACCATGCGGCTAGCCTAGGAGCTCATGCTTTAGACGGATGTGGAGAATTCATGCCTTCTCCTTCTGCTACTTCTTCCGATCCCACTTCTTTAAAATGCGCCGTCTGCGGATGTCACCGGAACTTTCACCGCCGCGAGCCCGACGATAGTTTTCCAGCCCTTACCACGCATGTAATCGAGTACCAGCCACACCACCGCCACCACCCGCCTCCGCCGCCGCAGCCAATTAGTTGGAGTCCAAATTCAGCATCGCCTCCACCGATCTCCTCCTCCTACTACCGTTCAGCTCCCCACATGCTTCTGGCTCTATCGACAGGGCAGTGTGCTCCTCCGGAAAGTGCAACGGCGGCTAACCGGGGTTCAAACGGGAGGAAACGATTCAGAACCAGATTCACTCTGGACCAGAAAGAGAAAATGCAACAGTTTGCAGAAAGTATGGGATGGAGGATGCAAAAGAGAGATGAGGAAGTGGTTCAAGAGTTTTGCAATGAGATTGGTATAGGTAAAGGAGTTTTGAAAGTATGGATGCACAACAATAAAAACTCATCTTCCAAGAAGGACGTTAATGGCGGAACGAATATTCCGGAACTCCAAAACAGCAACATCGGCCGGCATATAAATCTCTACGATGATGATGATGAAAGGGTACATGCTGCCATTAATGCCTCTTCTTCTTCTTCCTGA 879 49.72 MAVTNSATKSPEGEIDRTAVEVLPIKALPFSNGVLKRQNPQSHHHRHHLSSAANSSVVSYKECLKNHAASLGAHALDGCGEFMPSPSATSSDPTSLKCAVCGCHRNFHRREPDDSFPALTTHVIEYQPHHRHHPPPPPQPISWSPNSASPPPISSSYYRSAPHMLLALSTGQCAPPESATAANRGSNGRKRFRTRFTLDQKEKMQQFAESMGWRMQKRDEEVVQEFCNEIGIGKGVLKVWMHNNKNSSSKKDVNGGTNIPELQNSNIGRHINLYDDDDERVHAAINASSSSS 292
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 5715242 5716120 + BLOR03461 Blo11g00585 66785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo11g00585 292 MobiDBLite consensus disorder prediction 133 147 - -
Blo11g00585 292 Gene3D - 175 251 - -
Blo11g00585 292 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 189 246 IPR006455 -
Blo11g00585 292 MobiDBLite consensus disorder prediction 128 155 - -
Blo11g00585 292 SUPERFAMILY Homeodomain-like 180 248 IPR009057 -
Blo11g00585 292 MobiDBLite consensus disorder prediction 173 187 - -
Blo11g00585 292 PANTHER HOMEOBOX DOMAIN, ZF-HD CLASS PROTEIN 4 267 - -
Blo11g00585 292 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 4 267 - -
Blo11g00585 292 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 60 111 IPR006456 -
Blo11g00585 292 MobiDBLite consensus disorder prediction 172 191 - -
Blo11g00585 292 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 60 111 IPR006456 -
Blo11g00585 292 Pfam ZF-HD protein dimerisation region 58 112 IPR006456 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo10g00133 Blo11g00585 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo11g00585 Blo-Chr11:5715242 Blo16g00046 Blo-Chr16:1874806 3.98E-47 dispersed
Blo16g00296 Blo-Chr16:7197335 Blo11g00585 Blo-Chr11:5715242 2.13E-39 dispersed
Blo10g00133 Blo-Chr10:1513887 Blo11g00585 Blo-Chr11:5715242 1.64E-118 wgd
Blo11g00585 Blo-Chr11:5715242 Blo17g00363 Blo-Chr17:3880322 6.41E-93 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12924 PF04770 ZF-HD_dimer 2.60E-28 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo11g00585 - - jre:108984667 309.301