Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo11g00595 ATGTCCATCTTGCCTCCACGAGCCTACGGTTCTGCGTCTTCGTCGTCTTCCTCCTCTGTTCCCTCTCCAAACCCTCCTTCCCAACATGGCAAACATCCTGTTCTTCTCTCCTCTTCTCCTCCCTCCCCCTCCCCTTCTCCTATTTGTCAGTGTAACCCGCCCTTCCAGTTGCTTCGGATCTCCGATTCTCAGTCTCCCCCCTTAGACTCCTGCGGCGATTCGGGTGCAACCAGTAAAGCTGCAGAAGATTTCTGTGGACCTTCCGAAAAGGTTTTGACCAACTGCATGGATTTCTTCTTACGATCTTCTCTCCAGGTGACACAGCACAAGAAATCAGTCCATCAGAAGACTTTGCCCCATGAAATTGCAATCACTCATACCCAGGATTCCTCAAGTGGAGTGGGGATAAGATCAGCTCATTCTAAAGGAAAAAGGACTGCATCTACTGATTGTCCTTTAGGTCAACAAAACAATGGGTCTGTTAGTTCACTTGGCCATGGGCCCAATTCAACTGTTCGAAAAGCCCAGGTAATGAATGCTAATCATTTGCTGAACTTTCATTATGATGCCATTTCACGTCCTCAACCAAGAGCTCCTCCTCCAAGAAGGCAGAAATTAAAGCCATACAACAAAGCTCTATTTCTTCAGGCTAATTATAAATTTGTGGTATTAGACTCGGGTAATTATTTACCAGAGTCTTTGGATCCAGATAAAATGTTGCATTGGGATGAGATTATATGTGTGAGGTACTCGACACCAACTCTTATTCAGTGTCCTATTTGTTTGGAATATCCCTTGTGTCCTCAAATTACCACATGTGGACATATTTTTTGTTTCCCATGCATTCTACGTCACTTGTTAATGGGAGAAGAGGATCATAAAGGTGACTGTTGGAAAAAGTGTCCCTTGTGTTTTGTTATGATATCTCCAAAAGATTTATATACAGTATACATTGAGATTGTTGAACTGTATTCTGTTGGTGATACTATACCATTCACGCTTTTGAACCGGCAAAAAGATTCATTCGTTTTATCACGTCAGCATGAACAAGAGAACATAGGCATACCGCTTGATGATAGCGATGAAATTTACGACCCCTTTTCGAAGTTCACATTTACATTGGATGTGAATCTCTCAATCAGAAAAGCAAAGTCAGATCTAGAAGGATGGTTGGTCAGAGCAGAAGCAGGTCTTGTTGATGACCTAGAGAAGCTTCCATATGTTTGTGCTGCAGTCGAGCAACTAGATCAGAGGAAAATGCTTTTGAATGAGCATCTGGCTTCTGTGAAGAGTCAGTCCTGTCAAAATATGGACTCTCAGGGAGAAACTCATTCAGTTAAGTCCAATGCTGATGTTGATACCTCTGGTTGTGCAACATCCGGTTTTGGAGATGCATTTTTGGCTTCTGAATCCAATGAACAAAGCAAGAGGTATAGTAATGCGATCACTTTGAATGGTACTTGTTTGGAGCAAACGATGGATGTGGGTGAATCATTAGAAGGTCAAGAAGTTGTTTTATCTTCTTCATACGAGGAAGATAGTATCGTTCAAGGGACCTCAAATCAATGTAGATCAGTAGAAAAGAAAGAGTCATACAATTTCTACCAGGCGGCTGATGGCCAATACATCATTCTTCATCCACTAAATGTTAAGTGTCTTCTACACCATTATGGAAGCTACACCATGCTTCCAGACAGTTCTATATTCCCTTTTTTTTCCAACCACGACCATGAAATGCAGGATAAGTGGAAGAATCTTACAGTTGGAGACAGTGACACAGTCAGAAGCCACAAGGAGGCGCTATCGTTATCTAAGTCATTTTTCTTTGACAACTACCTTCCAGGCATGCTTTGCGAAGTTGATTTGAGTGAATTATTGCCTCCTGCCTCTCTCATGCCGTTTATGGACGAAATAAAGAAGCGTGAAAAGCAGAGGAAACAACTTGCTAAGAAGGAATACAAGGAGAAGATCAAGGCAGAAACTGCAGCAACTTATTCTATGATTGATTTACATAACTTTGGGCATGTCATTCACGATGATGCCCCATCTTTCTCTATGGATGATTTTGAAGCTTTGGGAAGTTCTGGGGGTACATCATCCAGCCCTCCAATTGTGGCGGATAGGAAACTCTTTTCAAATGTTACTAAGCTTGGGTTTGCAGCGGGGCACGATAGTCCGCAGTTGACGATGGATGAAACAAAGCCTCCGAGTAATCAACCGAACACTGGCTCATTGAGTGGAACAGGGACGAGGAATGAATCGTTTGCCAATGTGACATCGAGAGCCCCGGACGCACCACCCAAGAATGGGGAAATGGGGAAACGGGGGAAGAAACCGAGTAGAGTTCTCCTATCAACGTCGGGGGGTCGGAGATACTGA 2379 43.3 MSILPPRAYGSASSSSSSSVPSPNPPSQHGKHPVLLSSSPPSPSPSPICQCNPPFQLLRISDSQSPPLDSCGDSGATSKAAEDFCGPSEKVLTNCMDFFLRSSLQVTQHKKSVHQKTLPHEIAITHTQDSSSGVGIRSAHSKGKRTASTDCPLGQQNNGSVSSLGHGPNSTVRKAQVMNANHLLNFHYDAISRPQPRAPPPRRQKLKPYNKALFLQANYKFVVLDSGNYLPESLDPDKMLHWDEIICVRYSTPTLIQCPICLEYPLCPQITTCGHIFCFPCILRHLLMGEEDHKGDCWKKCPLCFVMISPKDLYTVYIEIVELYSVGDTIPFTLLNRQKDSFVLSRQHEQENIGIPLDDSDEIYDPFSKFTFTLDVNLSIRKAKSDLEGWLVRAEAGLVDDLEKLPYVCAAVEQLDQRKMLLNEHLASVKSQSCQNMDSQGETHSVKSNADVDTSGCATSGFGDAFLASESNEQSKRYSNAITLNGTCLEQTMDVGESLEGQEVVLSSSYEEDSIVQGTSNQCRSVEKKESYNFYQAADGQYIILHPLNVKCLLHHYGSYTMLPDSSIFPFFSNHDHEMQDKWKNLTVGDSDTVRSHKEALSLSKSFFFDNYLPGMLCEVDLSELLPPASLMPFMDEIKKREKQRKQLAKKEYKEKIKAETAATYSMIDLHNFGHVIHDDAPSFSMDDFEALGSSGGTSSSPPIVADRKLFSNVTKLGFAAGHDSPQLTMDETKPPSNQPNTGSLSGTGTRNESFANVTSRAPDAPPKNGEMGKRGKKPSRVLLSTSGGRRY 792
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 5879571 5885006 + BLOR03471 Blo11g00595 66795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo11g00595 792 Pfam Zinc finger, C3HC4 type (RING finger) 258 304 IPR018957 GO:0046872
Blo11g00595 792 MobiDBLite consensus disorder prediction 7 37 - -
Blo11g00595 792 PANTHER RING FINGER 10 FAMILY MEMBER 130 572 IPR039739 -
Blo11g00595 792 PANTHER RING FINGER 10 FAMILY MEMBER 617 789 IPR039739 -
Blo11g00595 792 MobiDBLite consensus disorder prediction 1 48 - -
Blo11g00595 792 ProSitePatterns Zinc finger RING-type signature. 273 282 IPR017907 -
Blo11g00595 792 ProSiteProfiles Zinc finger RING-type profile. 258 304 IPR001841 -
Blo11g00595 792 MobiDBLite consensus disorder prediction 148 170 - -
Blo11g00595 792 SMART ring_2 258 304 IPR001841 -
Blo11g00595 792 MobiDBLite consensus disorder prediction 730 759 - -
Blo11g00595 792 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 250 319 IPR013083 -
Blo11g00595 792 MobiDBLite consensus disorder prediction 125 170 - -
Blo11g00595 792 SUPERFAMILY RING/U-box 257 311 - -
Blo11g00595 792 Coils Coil 639 659 - -
Blo11g00595 792 CDD RING-HC_RNF10 258 305 - -
Blo11g00595 792 MobiDBLite consensus disorder prediction 722 792 - -
Blo11g00595 792 Coils Coil 412 432 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo11g00595 Blo-Chr11:5879571 Blo07g00946 Blo-Chr7:28752950 4.23E-06 dispersed
Blo11g00595 Blo-Chr11:5879571 Blo02g00076 Blo-Chr2:513655 2.52E-07 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo11g00595 - - pxb:103966589 713.375