Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo11g00611 ATGGGTGAAAATAAGCCAACTGAAATTAAAGATTTTCAGATTACAGTAGCAGATAAAGAAGAGGGGAAGAAGCAATTAGCTCCAAAAAGAAGCTCAAGTAAAGACAGGCACACCAAGGTGGATGGTCGAGGAAGAAGGATACGGATGCCAGCTCTAAGCGCAGCAAGAATTTTCCAATTGACAAGAGAATTAGGTCATAAATCAGATGGGGAAACCATCCAGTGGCTCTTGCAACAGGCGGAACCTTCGATAATTGCGGCCACCGGAACCGGAACTATTCCGGCTTCCGCTTTAGCCGCCAACGGAGCATCTTTTTCACAGCAAGGGACCTCTTTATCAACCGGATTGCACCAAAAAACTGAGGACGATTTTGGGGGGTCAGGAAGTATGACCAGTTGGGCTATGATGGGTGGCAATTTGGGGAGACCACCGTCCCATATGGGTTCAGGGCTATGGCCTCCGATCGGTGGCTTTGGGCCTCAGTCATCGTCTTCTCCGAACACAAATTTGACGCCAGAGAGTGGAAATTATCTACAGAAGATCGTTCCCGGGCATGACTTGCCAGTCGGAAATATGGGTCCGATGACTTTCACCTCTATTCTGAGTGGCAATAGCCAGCAGCTGCCGGAACTGGGACTCGGGCTTTGGCCAGAAGGTCACATCGGGGTTTTGAACCCACAGGCTTTGAACCAGTTTTATCAGCAGATGAGGCAGGCTAGAGTTCAAACGCACCATCACCAGGCTTCTCCTAAGGATGACTCTCAAGGTTCAGACTCAGCCAACTAG 786 49.36 MGENKPTEIKDFQITVADKEEGKKQLAPKRSSSKDRHTKVDGRGRRIRMPALSAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASALAANGASFSQQGTSLSTGLHQKTEDDFGGSGSMTSWAMMGGNLGRPPSHMGSGLWPPIGGFGPQSSSSPNTNLTPESGNYLQKIVPGHDLPVGNMGPMTFTSILSGNSQQLPELGLGLWPEGHIGVLNPQALNQFYQQMRQARVQTHHHQASPKDDSQGSDSAN 261
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 6109106 6109891 - BLOR03487 Blo11g00611 66811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo11g00611 261 MobiDBLite consensus disorder prediction 238 261 - -
Blo11g00611 261 ProSiteProfiles TCP domain profile. 33 87 IPR017887 -
Blo11g00611 261 MobiDBLite consensus disorder prediction 1 44 - -
Blo11g00611 261 Pfam TCP family transcription factor 32 119 IPR017887 -
Blo11g00611 261 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 3 257 IPR005333 GO:0003700
Blo11g00611 261 PANTHER TRANSCRIPTION FACTOR TCP20-LIKE 3 257 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g00768 Blo-Chr4:7327486 Blo11g00611 Blo-Chr11:6109106 3.94E-39 dispersed
Blo11g00611 Blo-Chr11:6109106 Blo17g00570 Blo-Chr17:10478760 7.40E-105 dispersed
Blo12g00477 Blo-Chr12:22409012 Blo11g00611 Blo-Chr11:6109106 1.62E-33 transposed
Blo10g00401 Blo-Chr10:6870883 Blo11g00611 Blo-Chr11:6109106 3.36E-158 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12930 PF03634 TCP 1.50E-30 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo11g00611 - - jre:108987051 375.941