Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo11g00612 | ATGGAGAATTATCAGGTTTTCTTCCCTTGCCCGTCGAGTACAATGGAAGCTTATCCTCCATTATCCTCAGATAAGGAACACGTTTACCTTGAAAATTCTGGTGGGGTTTCTGGGTTGAGACGAGGAGTTCTGGCAAAAGCTTCTTCGGATCAGAGCGGATCGAGCTCTTTCGGATCGGGAGAAAGCGGTGAAAAAGTCGTCAAGAAGAAGGGGGAGAAGAAGATTAGGAGGCCTAAGCATGCTTTTCAGACGAGAAGCCAGGTTGATATACTAGATGATGGGTATCGTTGGAGAAAATATGGTCAGAAGGCAGTGAAGAACAACAAATTTCCCAGGAGCTACTACAGATGCACACATCAAGGATGCAACGTAAAGAAGCAAGTCCAACGCCTAACAAAAGATGAAGGGGTTGTCGTGACTACCTATGAAGGAGTCCATTCCCATCCGATTGACAAACCCTCTGATAACTTTGAACATATCTTGAGTCAAATGCAAATTTACGCATCACACATGTAG | 516 | 44.57 | MENYQVFFPCPSSTMEAYPPLSSDKEHVYLENSGGVSGLRRGVLAKASSDQSGSSSFGSGESGEKVVKKKGEKKIRRPKHAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLTKDEGVVVTTYEGVHSHPIDKPSDNFEHILSQMQIYASHM | 171 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 6117527 | 6119799 | + | BLOR03488 | Blo11g00612 | 66812 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo11g00612 | 171 | Pfam | WRKY DNA -binding domain | 92 | 149 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Blo11g00612 | 171 | MobiDBLite | consensus disorder prediction | 47 | 81 | - | - | |
Blo11g00612 | 171 | SUPERFAMILY | WRKY DNA-binding domain | 83 | 150 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Blo11g00612 | 171 | MobiDBLite | consensus disorder prediction | 47 | 61 | - | - | |
Blo11g00612 | 171 | SMART | WRKY_cls | 91 | 150 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Blo11g00612 | 171 | ProSiteProfiles | WRKY domain profile. | 86 | 151 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Blo11g00612 | 171 | Gene3D | WRKY domain | 75 | 151 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Blo11g00612 | 171 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 59 | 167 | IPR044810 | GO:0003700 | |
Blo11g00612 | 171 | PANTHER | WRKY TRANSCRIPTION FACTOR 75-RELATED | 59 | 167 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo07g00015 | Blo-Chr7:309606 | Blo11g00612 | Blo-Chr11:6117527 | 2.94E-18 | dispersed | |
Blo11g00612 | Blo-Chr11:6117527 | Blo10g00144 | Blo-Chr10:1651670 | 6.02E-13 | dispersed | |
Blo11g00612 | Blo-Chr11:6117527 | Blo01g00448 | Blo-Chr1:4939080 | 1.97E-32 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
12931 | PF03106 | WRKY | 3.70E-26 | CL0274 | Blo | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo11g00612 | - | - | pvy:116145559 | 214.927 |