Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo11g00612 ATGGAGAATTATCAGGTTTTCTTCCCTTGCCCGTCGAGTACAATGGAAGCTTATCCTCCATTATCCTCAGATAAGGAACACGTTTACCTTGAAAATTCTGGTGGGGTTTCTGGGTTGAGACGAGGAGTTCTGGCAAAAGCTTCTTCGGATCAGAGCGGATCGAGCTCTTTCGGATCGGGAGAAAGCGGTGAAAAAGTCGTCAAGAAGAAGGGGGAGAAGAAGATTAGGAGGCCTAAGCATGCTTTTCAGACGAGAAGCCAGGTTGATATACTAGATGATGGGTATCGTTGGAGAAAATATGGTCAGAAGGCAGTGAAGAACAACAAATTTCCCAGGAGCTACTACAGATGCACACATCAAGGATGCAACGTAAAGAAGCAAGTCCAACGCCTAACAAAAGATGAAGGGGTTGTCGTGACTACCTATGAAGGAGTCCATTCCCATCCGATTGACAAACCCTCTGATAACTTTGAACATATCTTGAGTCAAATGCAAATTTACGCATCACACATGTAG 516 44.57 MENYQVFFPCPSSTMEAYPPLSSDKEHVYLENSGGVSGLRRGVLAKASSDQSGSSSFGSGESGEKVVKKKGEKKIRRPKHAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLTKDEGVVVTTYEGVHSHPIDKPSDNFEHILSQMQIYASHM 171
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 6117527 6119799 + BLOR03488 Blo11g00612 66812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo11g00612 171 Pfam WRKY DNA -binding domain 92 149 IPR003657 GO:0003700|GO:0006355|GO:0043565
Blo11g00612 171 MobiDBLite consensus disorder prediction 47 81 - -
Blo11g00612 171 SUPERFAMILY WRKY DNA-binding domain 83 150 IPR036576 GO:0003700|GO:0006355|GO:0043565
Blo11g00612 171 MobiDBLite consensus disorder prediction 47 61 - -
Blo11g00612 171 SMART WRKY_cls 91 150 IPR003657 GO:0003700|GO:0006355|GO:0043565
Blo11g00612 171 ProSiteProfiles WRKY domain profile. 86 151 IPR003657 GO:0003700|GO:0006355|GO:0043565
Blo11g00612 171 Gene3D WRKY domain 75 151 IPR036576 GO:0003700|GO:0006355|GO:0043565
Blo11g00612 171 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 59 167 IPR044810 GO:0003700
Blo11g00612 171 PANTHER WRKY TRANSCRIPTION FACTOR 75-RELATED 59 167 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo07g00015 Blo-Chr7:309606 Blo11g00612 Blo-Chr11:6117527 2.94E-18 dispersed
Blo11g00612 Blo-Chr11:6117527 Blo10g00144 Blo-Chr10:1651670 6.02E-13 dispersed
Blo11g00612 Blo-Chr11:6117527 Blo01g00448 Blo-Chr1:4939080 1.97E-32 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12931 PF03106 WRKY 3.70E-26 CL0274 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo11g00612 - - pvy:116145559 214.927