Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo11g00618 | ATGGGAAGGGGGAGGACCGGGGAAGGCGGGTTGCCGACGAGAAGGGGCAGAGTAGAACTTTTATCAAGAATCAAATCTTTTAAATCTAATTCCAAGTTCCCTATTCTCGAGGATGTTGTCGATTATCTTCGCTCCACCTACAGAGACTATAGTAGAATGAAGTTGAGGCCCTTTACTAAGATTGTCCAGGAAACTCTCACCGCATCGGCGCTTTCTCAGCAAAAAAGGGACCAAAATAGTAGGATATCTGACTCTTCTTCTCCGCCAACAAGAAAGAAGAGGAGAGTAGAGGATGAAGAGGAAGGGAGCGAAGAAGAACATTGTAAACAAGGAATTGCGAGGAAGAGGTCCAAGGGAGATAATGAGGAGCATAGATTGCAACGCATGGAAGACTTGCACCTTAGGAGGATGCGTCGATCTGTTCAGGACCGTCAATCCTTGACTTCATCCACTGCTTCTGATTCTAATGATGATGCAGAAGGCGAAAGCGATGAGGCAGTTTCTACGTCTGAAGATGCAATTTTTGGAGAGAAAGTGGAGCCTCAGTTCGATTTGATGAAGTCTATGCTGCGATCATCTTATATGGAAATTAATAACCCAAAGCTCAAGTCAGAAAAGAAAATTTTGGAATTGGAGGTGGCCGTCGAAAATGAAGTTGCCAAAAAGATCACTCCAGCAAATGAAGGAAATAGAGGCGAGGGAATGCTGAAGTATGGTTCAAAAAAAGAAGCCAATAATCCGTTTGATGGATTGGAGATCAAAGGAAAGAATGGCCCCATGTTCAGCAATTTAGGAGGAATGGATGAGCTGCTAGAGGAGTTGAAGAAAGATGTGCTGTTGCCCCTTTATCATCCGCATGTTCCCCAGGGACTAGGGTTCAAGCCCACTACTGGGATTTTGCTGCACGGGCCATCTGGCTGCGGGAAGACTACATTGGCTCAGGCTATTGCAAATGAGACTGGTTTTCCCTTTTACAAGATTTCTGCTGCTGAAGTGGTTTCAGGAATTTCAGGTTCATCAGAAGAAAGTATCAGGGAACTTTTTTCAAAAGCATATAAGACTGCTCCATCAATTGTCTTTATTGATGAAATTGAAGTAATTGCGTCAAAGAGAGAAAATCTGCAAAGGGAGACGGATAAGCGAATTGTAACACAATTGATGACGTGTATGGATCAATCACGCCATTCAATAGATGCATCCTCAGCTAGTTCTGATAGTAAACGTGGCTATGTTCTTGTGATTGGTGCTACCAATAGACCAGATGACATTGACCCTGCTCTAAGGAGGGCTGGTCGATTTGATCGAGAGTTTGCCTTAGGTGTCCCCAATGAAGAGGCGAGGGCAGAGATTCTTTCTGTTCTTACATGCAATTTAAGGCTTGAAGGTTCTCTCGATCTTAGAAAAATAGCCAGGGCTATGCCAGGGTTTGTTGGAGCTGACTTGGCATACTTGGCTGACAAGGCTTGTCGTCTGGCCTTGGATGAAAGCATATGCAGGAAGAAGTTTGAATTGTCTAGGGAGATCATAAATAAGGAGGATATTAAACATTGGTGGAAGCAATCCTGGTCACGCGAAGAAGTAGAGAAGCTATCAATTTGTACTAGCCATTTTGAGGAAGCGATAAAAATGGTTCAACCTTCATCAAGAAGAGAAGGATTCTCTTCAATTCCTAATGTAAAATGGGAAGATGTAGGTGGGCTAGATCAATTACGAGAAGAATTTGATGAACATATTGTTGATCTTATAAAGTTTCCTGAGGATTATGAGGGATTTGGAATCACTCGAGAGTTTGGTTTTTTGCTATATGGGCCCCCTGGGTGTGGTAAGACTTTGATTGCCAAGGCCGTAGCTAATGAGGCAGGAGCTAATTTCATCCAAATCAAGGGTGCTGAAATTCTGAATAAATATGTTGGAGAAAGTGAACAGGCAGTTCTAGCACTTTTCAGACGAGCGAGGACATGTTCGCCTTGTATAGTCTTTTTTGACGAAGTGGATGCATTGATAACGCAACGGGGGAAAGAAGGGAGTTGGGTTGTTGAGCGTGTACTAACTCAGTTACTTGTAGAGTTAAATGGTGGGGAAGATCGACGTGGTGTTTTTGTCATTGGTGCGACAAATAGGCCGCATGTCATCGACAGAGCCATGCTACGGCCTGGTCGGTTTGGCAAATGTATGCATGTTCCACTACCCGCACCAAAGGAACGCGGATTGATTTTAAAAGCCATTGCAAGGAAATATCCAGTAGATGCTTCAGTAGACTTGATTACGCTTGGGCAGTCAGATTCTTGCCAGAATTTTAGTGGAGCAGACCTTGCCGAAATGGTGAACGAGGCTGCCATGGCTGCTCGTCGAGAAAAACGCGCCCTTCAAAGCAAACAGTCGTCCGATAATAGTAGTCTGGATGCAGAACAATGTAATAATATTAAGACCCATCATTTTGAGCAGGCACTCCTTAAAGTTACTCCATCAGTTACAGAGGAGGATGTGCAGTTCTACCAGGGTTTTAGCGAAAGCTTAAGGCGGCGCGAAAATAAAAAATCATGCCCTCCTCGGTTAACTTATCGAAGCACAGATGAGTATAATGCTTGCTTTTTCCTCTGTTTTTGTGAGTATCATCTCTTAGTTGTTGTTGGGCTTGTCTTTGAGATCATGGAAGTGGCATTGGATTTAACGGAAGATGAAAAGCGCCAGCTTCAGTATTTAACTGATGGAGAAGAGAGTAGAGTTTTCTGTCCAATTGATGGATGTGGAGCTCGCTTGAATTCCTTGCATGAGTTTGAAGATCATTATAATGCTCGACATACCGCTTCTTGTTCAGTGTGCTCTCGAGTCTATCCAACATCACGCTTGCTTAGTATACATGTGTCTGAAGCACATGACTCTTTCTTTCAAGCAAAAGTTGCCCGGGGATATGCTATGTATGAATGCCTGGTCGAAGGTTGTGGATTAAAGTTGAAGAGCTACAAAAGTCGGCAGCAGCATCTGGTGGACAAGCATAGATTCCCCACTTCATTCGAATTTTTGAAGAAGTCTCAACCATCTAAGAAACAAAGGCAGAAATCTCAGAGTAAATTAGCTAGTTACAAAAAGGAAGAGTCTTCTAGCATGATGGATGTCGAAAATGAGGGTATGGCTGGTCTCATTTCGGCAGTTTCTAAGTTAAGTACATCGGACTCAACTCATTCGTCCATCAGCTTTGGGCACCGTCACGCTCGAGGCCTCACTTTTGTTCCAAGGGCAGTTAATCATGGAAAAAGTCAAAACTCAAAAGATGCAGCTGGGAAAAAGAGTAGCAGATCTGTAGAAGACCAAACAATGGATCATCCTTAG | 3330 | 43.48 | MGRGRTGEGGLPTRRGRVELLSRIKSFKSNSKFPILEDVVDYLRSTYRDYSRMKLRPFTKIVQETLTASALSQQKRDQNSRISDSSSPPTRKKRRVEDEEEGSEEEHCKQGIARKRSKGDNEEHRLQRMEDLHLRRMRRSVQDRQSLTSSTASDSNDDAEGESDEAVSTSEDAIFGEKVEPQFDLMKSMLRSSYMEINNPKLKSEKKILELEVAVENEVAKKITPANEGNRGEGMLKYGSKKEANNPFDGLEIKGKNGPMFSNLGGMDELLEELKKDVLLPLYHPHVPQGLGFKPTTGILLHGPSGCGKTTLAQAIANETGFPFYKISAAEVVSGISGSSEESIRELFSKAYKTAPSIVFIDEIEVIASKRENLQRETDKRIVTQLMTCMDQSRHSIDASSASSDSKRGYVLVIGATNRPDDIDPALRRAGRFDREFALGVPNEEARAEILSVLTCNLRLEGSLDLRKIARAMPGFVGADLAYLADKACRLALDESICRKKFELSREIINKEDIKHWWKQSWSREEVEKLSICTSHFEEAIKMVQPSSRREGFSSIPNVKWEDVGGLDQLREEFDEHIVDLIKFPEDYEGFGITREFGFLLYGPPGCGKTLIAKAVANEAGANFIQIKGAEILNKYVGESEQAVLALFRRARTCSPCIVFFDEVDALITQRGKEGSWVVERVLTQLLVELNGGEDRRGVFVIGATNRPHVIDRAMLRPGRFGKCMHVPLPAPKERGLILKAIARKYPVDASVDLITLGQSDSCQNFSGADLAEMVNEAAMAARREKRALQSKQSSDNSSLDAEQCNNIKTHHFEQALLKVTPSVTEEDVQFYQGFSESLRRRENKKSCPPRLTYRSTDEYNACFFLCFCEYHLLVVVGLVFEIMEVALDLTEDEKRQLQYLTDGEESRVFCPIDGCGARLNSLHEFEDHYNARHTASCSVCSRVYPTSRLLSIHVSEAHDSFFQAKVARGYAMYECLVEGCGLKLKSYKSRQQHLVDKHRFPTSFEFLKKSQPSKKQRQKSQSKLASYKKEESSSMMDVENEGMAGLISAVSKLSTSDSTHSSISFGHRHARGLTFVPRAVNHGKSQNSKDAAGKKSSRSVEDQTMDHP | 1109 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 6318579 | 6327672 | + | BLOR03494 | Blo11g00618 | 66818 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo11g00618 | 1109 | MobiDBLite | consensus disorder prediction | 87 | 142 | - | - | |
Blo11g00618 | 1109 | Pfam | ATPase family associated with various cellular activities (AAA) | 299 | 439 | IPR003959 | GO:0005524|GO:0016887 | |
Blo11g00618 | 1109 | Pfam | ATPase family associated with various cellular activities (AAA) | 600 | 728 | IPR003959 | GO:0005524|GO:0016887 | |
Blo11g00618 | 1109 | Gene3D | - | 442 | 551 | - | - | |
Blo11g00618 | 1109 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 261 | 549 | IPR027417 | - | |
Blo11g00618 | 1109 | Coils | Coil | 772 | 792 | - | - | |
Blo11g00618 | 1109 | Gene3D | - | 730 | 818 | - | - | |
Blo11g00618 | 1109 | MobiDBLite | consensus disorder prediction | 70 | 86 | - | - | |
Blo11g00618 | 1109 | CDD | AAA | 598 | 729 | - | - | |
Blo11g00618 | 1109 | Gene3D | - | 557 | 833 | IPR027417 | - | |
Blo11g00618 | 1109 | SMART | c2h2final6 | 974 | 999 | IPR013087 | - | |
Blo11g00618 | 1109 | SMART | c2h2final6 | 909 | 934 | IPR013087 | - | |
Blo11g00618 | 1109 | SMART | c2h2final6 | 936 | 959 | IPR013087 | - | |
Blo11g00618 | 1109 | Pfam | Nucleolin binding domain | 20 | 66 | IPR031996 | - | |
Blo11g00618 | 1109 | ProSitePatterns | AAA-protein family signature. | 411 | 429 | IPR003960 | GO:0005524|GO:0016887 | |
Blo11g00618 | 1109 | CDD | AAA | 265 | 440 | - | - | |
Blo11g00618 | 1109 | Pfam | AAA+ lid domain | 464 | 497 | IPR041569 | - | |
Blo11g00618 | 1109 | Pfam | AAA+ lid domain | 753 | 788 | IPR041569 | - | |
Blo11g00618 | 1109 | MobiDBLite | consensus disorder prediction | 70 | 175 | - | - | |
Blo11g00618 | 1109 | SMART | AAA_5 | 295 | 443 | IPR003593 | - | |
Blo11g00618 | 1109 | SMART | AAA_5 | 595 | 731 | IPR003593 | - | |
Blo11g00618 | 1109 | MobiDBLite | consensus disorder prediction | 1009 | 1038 | - | - | |
Blo11g00618 | 1109 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 938 | 959 | IPR013087 | - | |
Blo11g00618 | 1109 | MobiDBLite | consensus disorder prediction | 1089 | 1109 | - | - | |
Blo11g00618 | 1109 | PANTHER | NUCLEAR VALOSIN-CONTAINING PROTEIN-LIKE | 123 | 838 | - | - | |
Blo11g00618 | 1109 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 557 | 836 | IPR027417 | - | |
Blo11g00618 | 1109 | Gene3D | - | 253 | 440 | IPR027417 | - | |
Blo11g00618 | 1109 | MobiDBLite | consensus disorder prediction | 1079 | 1109 | - | - | |
Blo11g00618 | 1109 | PANTHER | AAA-FAMILY ATPASE | 123 | 838 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo01g01177 | Blo-Chr1:43346969 | Blo11g00618 | Blo-Chr11:6318579 | 3.75E-44 | dispersed | |
Blo11g00618 | Blo-Chr11:6318579 | Blo12g00479 | Blo-Chr12:22420429 | 3.57E-42 | dispersed | |
Blo11g00618 | Blo-Chr11:6318579 | Blo14g00191 | Blo-Chr14:1584858 | 3.21E-43 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
12933 | PF00004 | AAA | 6.70E-39 | CL0023 | Blo | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo11g00618 | K14571 | - | csv:101216502 | 902.508 |