Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo11g00618 ATGGGAAGGGGGAGGACCGGGGAAGGCGGGTTGCCGACGAGAAGGGGCAGAGTAGAACTTTTATCAAGAATCAAATCTTTTAAATCTAATTCCAAGTTCCCTATTCTCGAGGATGTTGTCGATTATCTTCGCTCCACCTACAGAGACTATAGTAGAATGAAGTTGAGGCCCTTTACTAAGATTGTCCAGGAAACTCTCACCGCATCGGCGCTTTCTCAGCAAAAAAGGGACCAAAATAGTAGGATATCTGACTCTTCTTCTCCGCCAACAAGAAAGAAGAGGAGAGTAGAGGATGAAGAGGAAGGGAGCGAAGAAGAACATTGTAAACAAGGAATTGCGAGGAAGAGGTCCAAGGGAGATAATGAGGAGCATAGATTGCAACGCATGGAAGACTTGCACCTTAGGAGGATGCGTCGATCTGTTCAGGACCGTCAATCCTTGACTTCATCCACTGCTTCTGATTCTAATGATGATGCAGAAGGCGAAAGCGATGAGGCAGTTTCTACGTCTGAAGATGCAATTTTTGGAGAGAAAGTGGAGCCTCAGTTCGATTTGATGAAGTCTATGCTGCGATCATCTTATATGGAAATTAATAACCCAAAGCTCAAGTCAGAAAAGAAAATTTTGGAATTGGAGGTGGCCGTCGAAAATGAAGTTGCCAAAAAGATCACTCCAGCAAATGAAGGAAATAGAGGCGAGGGAATGCTGAAGTATGGTTCAAAAAAAGAAGCCAATAATCCGTTTGATGGATTGGAGATCAAAGGAAAGAATGGCCCCATGTTCAGCAATTTAGGAGGAATGGATGAGCTGCTAGAGGAGTTGAAGAAAGATGTGCTGTTGCCCCTTTATCATCCGCATGTTCCCCAGGGACTAGGGTTCAAGCCCACTACTGGGATTTTGCTGCACGGGCCATCTGGCTGCGGGAAGACTACATTGGCTCAGGCTATTGCAAATGAGACTGGTTTTCCCTTTTACAAGATTTCTGCTGCTGAAGTGGTTTCAGGAATTTCAGGTTCATCAGAAGAAAGTATCAGGGAACTTTTTTCAAAAGCATATAAGACTGCTCCATCAATTGTCTTTATTGATGAAATTGAAGTAATTGCGTCAAAGAGAGAAAATCTGCAAAGGGAGACGGATAAGCGAATTGTAACACAATTGATGACGTGTATGGATCAATCACGCCATTCAATAGATGCATCCTCAGCTAGTTCTGATAGTAAACGTGGCTATGTTCTTGTGATTGGTGCTACCAATAGACCAGATGACATTGACCCTGCTCTAAGGAGGGCTGGTCGATTTGATCGAGAGTTTGCCTTAGGTGTCCCCAATGAAGAGGCGAGGGCAGAGATTCTTTCTGTTCTTACATGCAATTTAAGGCTTGAAGGTTCTCTCGATCTTAGAAAAATAGCCAGGGCTATGCCAGGGTTTGTTGGAGCTGACTTGGCATACTTGGCTGACAAGGCTTGTCGTCTGGCCTTGGATGAAAGCATATGCAGGAAGAAGTTTGAATTGTCTAGGGAGATCATAAATAAGGAGGATATTAAACATTGGTGGAAGCAATCCTGGTCACGCGAAGAAGTAGAGAAGCTATCAATTTGTACTAGCCATTTTGAGGAAGCGATAAAAATGGTTCAACCTTCATCAAGAAGAGAAGGATTCTCTTCAATTCCTAATGTAAAATGGGAAGATGTAGGTGGGCTAGATCAATTACGAGAAGAATTTGATGAACATATTGTTGATCTTATAAAGTTTCCTGAGGATTATGAGGGATTTGGAATCACTCGAGAGTTTGGTTTTTTGCTATATGGGCCCCCTGGGTGTGGTAAGACTTTGATTGCCAAGGCCGTAGCTAATGAGGCAGGAGCTAATTTCATCCAAATCAAGGGTGCTGAAATTCTGAATAAATATGTTGGAGAAAGTGAACAGGCAGTTCTAGCACTTTTCAGACGAGCGAGGACATGTTCGCCTTGTATAGTCTTTTTTGACGAAGTGGATGCATTGATAACGCAACGGGGGAAAGAAGGGAGTTGGGTTGTTGAGCGTGTACTAACTCAGTTACTTGTAGAGTTAAATGGTGGGGAAGATCGACGTGGTGTTTTTGTCATTGGTGCGACAAATAGGCCGCATGTCATCGACAGAGCCATGCTACGGCCTGGTCGGTTTGGCAAATGTATGCATGTTCCACTACCCGCACCAAAGGAACGCGGATTGATTTTAAAAGCCATTGCAAGGAAATATCCAGTAGATGCTTCAGTAGACTTGATTACGCTTGGGCAGTCAGATTCTTGCCAGAATTTTAGTGGAGCAGACCTTGCCGAAATGGTGAACGAGGCTGCCATGGCTGCTCGTCGAGAAAAACGCGCCCTTCAAAGCAAACAGTCGTCCGATAATAGTAGTCTGGATGCAGAACAATGTAATAATATTAAGACCCATCATTTTGAGCAGGCACTCCTTAAAGTTACTCCATCAGTTACAGAGGAGGATGTGCAGTTCTACCAGGGTTTTAGCGAAAGCTTAAGGCGGCGCGAAAATAAAAAATCATGCCCTCCTCGGTTAACTTATCGAAGCACAGATGAGTATAATGCTTGCTTTTTCCTCTGTTTTTGTGAGTATCATCTCTTAGTTGTTGTTGGGCTTGTCTTTGAGATCATGGAAGTGGCATTGGATTTAACGGAAGATGAAAAGCGCCAGCTTCAGTATTTAACTGATGGAGAAGAGAGTAGAGTTTTCTGTCCAATTGATGGATGTGGAGCTCGCTTGAATTCCTTGCATGAGTTTGAAGATCATTATAATGCTCGACATACCGCTTCTTGTTCAGTGTGCTCTCGAGTCTATCCAACATCACGCTTGCTTAGTATACATGTGTCTGAAGCACATGACTCTTTCTTTCAAGCAAAAGTTGCCCGGGGATATGCTATGTATGAATGCCTGGTCGAAGGTTGTGGATTAAAGTTGAAGAGCTACAAAAGTCGGCAGCAGCATCTGGTGGACAAGCATAGATTCCCCACTTCATTCGAATTTTTGAAGAAGTCTCAACCATCTAAGAAACAAAGGCAGAAATCTCAGAGTAAATTAGCTAGTTACAAAAAGGAAGAGTCTTCTAGCATGATGGATGTCGAAAATGAGGGTATGGCTGGTCTCATTTCGGCAGTTTCTAAGTTAAGTACATCGGACTCAACTCATTCGTCCATCAGCTTTGGGCACCGTCACGCTCGAGGCCTCACTTTTGTTCCAAGGGCAGTTAATCATGGAAAAAGTCAAAACTCAAAAGATGCAGCTGGGAAAAAGAGTAGCAGATCTGTAGAAGACCAAACAATGGATCATCCTTAG 3330 43.48 MGRGRTGEGGLPTRRGRVELLSRIKSFKSNSKFPILEDVVDYLRSTYRDYSRMKLRPFTKIVQETLTASALSQQKRDQNSRISDSSSPPTRKKRRVEDEEEGSEEEHCKQGIARKRSKGDNEEHRLQRMEDLHLRRMRRSVQDRQSLTSSTASDSNDDAEGESDEAVSTSEDAIFGEKVEPQFDLMKSMLRSSYMEINNPKLKSEKKILELEVAVENEVAKKITPANEGNRGEGMLKYGSKKEANNPFDGLEIKGKNGPMFSNLGGMDELLEELKKDVLLPLYHPHVPQGLGFKPTTGILLHGPSGCGKTTLAQAIANETGFPFYKISAAEVVSGISGSSEESIRELFSKAYKTAPSIVFIDEIEVIASKRENLQRETDKRIVTQLMTCMDQSRHSIDASSASSDSKRGYVLVIGATNRPDDIDPALRRAGRFDREFALGVPNEEARAEILSVLTCNLRLEGSLDLRKIARAMPGFVGADLAYLADKACRLALDESICRKKFELSREIINKEDIKHWWKQSWSREEVEKLSICTSHFEEAIKMVQPSSRREGFSSIPNVKWEDVGGLDQLREEFDEHIVDLIKFPEDYEGFGITREFGFLLYGPPGCGKTLIAKAVANEAGANFIQIKGAEILNKYVGESEQAVLALFRRARTCSPCIVFFDEVDALITQRGKEGSWVVERVLTQLLVELNGGEDRRGVFVIGATNRPHVIDRAMLRPGRFGKCMHVPLPAPKERGLILKAIARKYPVDASVDLITLGQSDSCQNFSGADLAEMVNEAAMAARREKRALQSKQSSDNSSLDAEQCNNIKTHHFEQALLKVTPSVTEEDVQFYQGFSESLRRRENKKSCPPRLTYRSTDEYNACFFLCFCEYHLLVVVGLVFEIMEVALDLTEDEKRQLQYLTDGEESRVFCPIDGCGARLNSLHEFEDHYNARHTASCSVCSRVYPTSRLLSIHVSEAHDSFFQAKVARGYAMYECLVEGCGLKLKSYKSRQQHLVDKHRFPTSFEFLKKSQPSKKQRQKSQSKLASYKKEESSSMMDVENEGMAGLISAVSKLSTSDSTHSSISFGHRHARGLTFVPRAVNHGKSQNSKDAAGKKSSRSVEDQTMDHP 1109
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 6318579 6327672 + BLOR03494 Blo11g00618 66818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo11g00618 1109 MobiDBLite consensus disorder prediction 87 142 - -
Blo11g00618 1109 Pfam ATPase family associated with various cellular activities (AAA) 299 439 IPR003959 GO:0005524|GO:0016887
Blo11g00618 1109 Pfam ATPase family associated with various cellular activities (AAA) 600 728 IPR003959 GO:0005524|GO:0016887
Blo11g00618 1109 Gene3D - 442 551 - -
Blo11g00618 1109 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 261 549 IPR027417 -
Blo11g00618 1109 Coils Coil 772 792 - -
Blo11g00618 1109 Gene3D - 730 818 - -
Blo11g00618 1109 MobiDBLite consensus disorder prediction 70 86 - -
Blo11g00618 1109 CDD AAA 598 729 - -
Blo11g00618 1109 Gene3D - 557 833 IPR027417 -
Blo11g00618 1109 SMART c2h2final6 974 999 IPR013087 -
Blo11g00618 1109 SMART c2h2final6 909 934 IPR013087 -
Blo11g00618 1109 SMART c2h2final6 936 959 IPR013087 -
Blo11g00618 1109 Pfam Nucleolin binding domain 20 66 IPR031996 -
Blo11g00618 1109 ProSitePatterns AAA-protein family signature. 411 429 IPR003960 GO:0005524|GO:0016887
Blo11g00618 1109 CDD AAA 265 440 - -
Blo11g00618 1109 Pfam AAA+ lid domain 464 497 IPR041569 -
Blo11g00618 1109 Pfam AAA+ lid domain 753 788 IPR041569 -
Blo11g00618 1109 MobiDBLite consensus disorder prediction 70 175 - -
Blo11g00618 1109 SMART AAA_5 295 443 IPR003593 -
Blo11g00618 1109 SMART AAA_5 595 731 IPR003593 -
Blo11g00618 1109 MobiDBLite consensus disorder prediction 1009 1038 - -
Blo11g00618 1109 ProSitePatterns Zinc finger C2H2 type domain signature. 938 959 IPR013087 -
Blo11g00618 1109 MobiDBLite consensus disorder prediction 1089 1109 - -
Blo11g00618 1109 PANTHER NUCLEAR VALOSIN-CONTAINING PROTEIN-LIKE 123 838 - -
Blo11g00618 1109 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 557 836 IPR027417 -
Blo11g00618 1109 Gene3D - 253 440 IPR027417 -
Blo11g00618 1109 MobiDBLite consensus disorder prediction 1079 1109 - -
Blo11g00618 1109 PANTHER AAA-FAMILY ATPASE 123 838 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01177 Blo-Chr1:43346969 Blo11g00618 Blo-Chr11:6318579 3.75E-44 dispersed
Blo11g00618 Blo-Chr11:6318579 Blo12g00479 Blo-Chr12:22420429 3.57E-42 dispersed
Blo11g00618 Blo-Chr11:6318579 Blo14g00191 Blo-Chr14:1584858 3.21E-43 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12933 PF00004 AAA 6.70E-39 CL0023 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo11g00618 K14571 - csv:101216502 902.508