Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo11g00622 ATGGCGGCCTGGGCTCCGCTTTCCAACTTCCTCTCTTTCCTCCTCCCCTCCAAATCCTCCCCTCCCAAATTGCCTCCGACCCAACTTCTCTCTTCTCCTTCTCTTCCGTCTCAACTTCATCTTCAGACGCAGAAGCCCGTCGATGACTTCGTCCCTCTAGTGGTCCAAGAGAGCCAGACTCACTCGGAGCCTCTATCCGCTGAATTAGCCTCTGTAATGTGTCCCTCACTGGCTTTTTCAAAAACCCTTTACTTCAGATCGACGTACAATGTGCAGGTGGTTGTGGACGATAACGAGCCTGAAGAGAGGCTGCTCAATAGGTTTCGAAGAGAGGTTATGAGGGCCGGCGTTATTCAAGAGTGCAAGAGGAGAAAGTTTTTTGAGAATAAACAGGATGAGAAAAAGCGCAAGTCTCGCGAAGCTGCCAAACGCAATCGTAAAAGGCGTCCACAACTAAAAACACCATATCAGAAGCCGGCGGAAGCTTCAACAATCAAGAAGGACGATGGAGAAGATAACTGGGATATGCCTGAACTGTCTTCCTCTGACATGGATGAACATCCTGCCATGGATTCTGCAGAAAAGAACTTCAGACGTAGCATGGAAGCTGGAGCTCAAGAAGAAGAAGAAGACGGAAAAGACCCAGAAAGTATGCCACTGAATCAGCCACTCCTCAAAAGAAACCGAACACTCTCGTCCAATCCACTCGCCATCATTGGAGCCAAAGTTTCCTACATAGAAAGCTTGGATTATGAGATCAACGAGAACGACTTGTTCAAACATGATTGGAGAAGCAGAACCAGAGTTCAAGTACTACAATATATATTCTTGAAATGGACACTAGCTTTCCTCGTCGGACTTCTCACCGGAATCATTGCCTCGGTGATCAATCTTGCCATAGAGAACATTGCCGGATACAAGCTTCTTGCCGTTGTCGGCTTCATAGAAGAGGACAGATATTTAATGGGGTTCGTCTATTTTACCTTAGCAAATTTTCTTCTAACGATGGTTGCTGCCGTGCTGTGCGTGTGCTTCGCACCCACTGCTGCTGGACCTGGAATACCAGAAATCAAAGCTTACCTCAATGGAGTTGACACTCCCAACATGTATGGTGCAACAACATTGATTGTCAAGATAATTGGAAGCATCGGAGCAGTTTCTGCAGGCCTGGATCTTGGAAAAGAAGGACCTCTGGTGCACATTGGTAGCTGCATTGCTTCCTTACTCGGCCAAGGTGGTCCTGATAAATACAGGATAAAATGGGGATGGATTCGCTATTTCAACAATGACCGGGACCGGAGAGATCTTATAACTTGCGGGGCTTCCTCAGGCGTTTGCGCGGCGTTCAGGGCTCCCGTTGGTGGTGTTTTGTTTTCATTAGAAGAGGTTGCTACGTGGTGGAGGAGTGCATTGCTGTGGAGAACTTTCTTCAGCACAGCAGTGGTGGTGGTAGTGTTGAGAGCATTCATTGAAATATGCAATTCTGGAGAATGTGGGCTTTTTGGAAAAGGAGGGCTTATTATGTTTGATGTAAGCAATGTTTCTCTTAGATATCATGTGATGGACATCATCCCTGCATCTATCATTGGTATCATTGGTGGAGTTCTTGGAAGCCTTTACAACCATCTCCTACACAAGGTTCTAGGACTCTACAATCTCATCAATCAGAAGGGAAAAGTGCATAAGCTCCTTCTCACTATTGCTGTGTCAATCTTCACTTCAGTCTGCCTTTACTGCCTTCCTTTTCTTGCCAAATGCACCCCTTGTGATTCCTCCCATACAGATTCCACCTGCCCCACAACTGGTCGATCAGGCAATTTCAAACAATTCAACTGCCCAAGTGGCCACTACAATGACCTAGCAACTCTACTTCTTACAACAAACGATGATGCTGTGCGCAATATATTCTCGACCAACACTTCCACAGAATATCACCCTTCGTCTCTTTTAATCTTTTTCGCAGTCTATTGCGTCTTGGGATTATTTACCTTTGGCATTGCTGTGCCATCTGGACTTTTTCTCCCAATTATCTTAATGGGATCTGCTTATGGTCGCTTACTAGGCATGGCTATGGGATCTTATACCAACATTGATCAAGGGCTTTATGCTGTTTTGGGTGCAGCCTCACTCATGGCAGGCTCAATGAGAATGACTGTTTCTCTTTGTGTGATATTCCTTGAACTCACCAACAACCTTCTCTTACTACCTATAACAATGATTGTCCTTCTGATTGCAAAAACTGTAGGAGACAGTTTTAACCCAAGCATCTATGAGATAATTCTGCACTTGAAAGGCTTGCCTTTCTTGGAAGCCAATCCAGAGCCATGGATGAGAAATATTACTGTTGGGGAGCTCGTTGATGCAAAGTCGGGAGTGATTACTTTATGTGGCATAGAAAAGGTGGCCCGTATTGTGGAAATTCTAAAGAACACAACACATAATGGTTTCCCTGTAGTGGATGGTGGGGTGGTACTACCAGGTGGAACTGCTGTTGGCGCCACACAACTGCATGGATTAATCCTGAGAGCTCACCTGGTTCAGGCGCTGAAAAAAAAGTGGTTCTTGAGACAAAAAAGGAGAACTGAAGATTGGGAAGTGAGAGAGAAGTTTACATGGGTTGATTTGGCAGAGAGAGAACTGAAGATTGAGGAAGTAGCTGTGACAAGTGATGAACTGGAGATGTATGTCGATCTTCATCCTCTTACTAACACAACGCCTTACACAGTGGTAGAGAGCATGTCAGTGGCAAAAGCTTTGGTGCTTTTCAGACAAGTAGGTCTTCGCCATTTGATTGTCGTACCTAATTATCAAGCAACTGGGGTGCCTCCAGTAGTAGGGATTCTGACCAGGCAAGACTTGATGGCTTACAACATTTTGATGGCCTTTCCCAATATTGCAAGGGCAAAGAGTGAAGGCAAATGA 2922 45.48 MAAWAPLSNFLSFLLPSKSSPPKLPPTQLLSSPSLPSQLHLQTQKPVDDFVPLVVQESQTHSEPLSAELASVMCPSLAFSKTLYFRSTYNVQVVVDDNEPEERLLNRFRREVMRAGVIQECKRRKFFENKQDEKKRKSREAAKRNRKRRPQLKTPYQKPAEASTIKKDDGEDNWDMPELSSSDMDEHPAMDSAEKNFRRSMEAGAQEEEEDGKDPESMPLNQPLLKRNRTLSSNPLAIIGAKVSYIESLDYEINENDLFKHDWRSRTRVQVLQYIFLKWTLAFLVGLLTGIIASVINLAIENIAGYKLLAVVGFIEEDRYLMGFVYFTLANFLLTMVAAVLCVCFAPTAAGPGIPEIKAYLNGVDTPNMYGATTLIVKIIGSIGAVSAGLDLGKEGPLVHIGSCIASLLGQGGPDKYRIKWGWIRYFNNDRDRRDLITCGASSGVCAAFRAPVGGVLFSLEEVATWWRSALLWRTFFSTAVVVVVLRAFIEICNSGECGLFGKGGLIMFDVSNVSLRYHVMDIIPASIIGIIGGVLGSLYNHLLHKVLGLYNLINQKGKVHKLLLTIAVSIFTSVCLYCLPFLAKCTPCDSSHTDSTCPTTGRSGNFKQFNCPSGHYNDLATLLLTTNDDAVRNIFSTNTSTEYHPSSLLIFFAVYCVLGLFTFGIAVPSGLFLPIILMGSAYGRLLGMAMGSYTNIDQGLYAVLGAASLMAGSMRMTVSLCVIFLELTNNLLLLPITMIVLLIAKTVGDSFNPSIYEIILHLKGLPFLEANPEPWMRNITVGELVDAKSGVITLCGIEKVARIVEILKNTTHNGFPVVDGGVVLPGGTAVGATQLHGLILRAHLVQALKKKWFLRQKRRTEDWEVREKFTWVDLAERELKIEEVAVTSDELEMYVDLHPLTNTTPYTVVESMSVAKALVLFRQVGLRHLIVVPNYQATGVPPVVGILTRQDLMAYNILMAFPNIARAKSEGK 973
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 6347279 6356653 + BLOR03498 Blo11g00622 66822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo11g00622 973 Gene3D - 771 962 IPR046342 -
Blo11g00622 973 SMART cbs_1 905 958 IPR000644 -
Blo11g00622 973 SMART cbs_1 791 850 IPR000644 -
Blo11g00622 973 SUPERFAMILY Clc chloride channel 256 771 IPR014743 -
Blo11g00622 973 Hamap 30S ribosomal protein S21 [rpsU]. 90 146 IPR001911 GO:0003735|GO:0005840|GO:0006412
Blo11g00622 973 Pfam Ribosomal protein S21 92 146 IPR001911 GO:0003735|GO:0005840|GO:0006412
Blo11g00622 973 MobiDBLite consensus disorder prediction 129 190 - -
Blo11g00622 973 SUPERFAMILY CBS-domain pair 773 956 IPR046342 -
Blo11g00622 973 CDD CBS_pair_voltage-gated_CLC_euk_bac 789 956 - -
Blo11g00622 973 Gene3D Ribosomal protein S8 105 143 IPR038380 -
Blo11g00622 973 CDD ClC_6_like 247 769 - -
Blo11g00622 973 MobiDBLite consensus disorder prediction 162 190 - -
Blo11g00622 973 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 212 969 - -
Blo11g00622 973 Pfam Voltage gated chloride channel 335 749 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Blo11g00622 973 MobiDBLite consensus disorder prediction 200 219 - -
Blo11g00622 973 ProSiteProfiles CBS domain profile. 902 967 IPR000644 -
Blo11g00622 973 PANTHER CHLORIDE CHANNEL PROTEIN CLC-A 212 969 - -
Blo11g00622 973 PRINTS Chloride channel signature 442 461 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Blo11g00622 973 PRINTS Chloride channel signature 347 364 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Blo11g00622 973 PRINTS Chloride channel signature 700 716 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Blo11g00622 973 PRINTS Chloride channel signature 378 397 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Blo11g00622 973 PRINTS Chloride channel signature 718 737 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Blo11g00622 973 PRINTS Chloride channel signature 668 688 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Blo11g00622 973 PRINTS Chloride channel signature 756 770 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Blo11g00622 973 PRINTS Plant CLC chloride channel signature 620 636 IPR002251 GO:0005247|GO:0006821|GO:0016020
Blo11g00622 973 PRINTS Plant CLC chloride channel signature 252 260 IPR002251 GO:0005247|GO:0006821|GO:0016020
Blo11g00622 973 PRINTS Plant CLC chloride channel signature 495 502 IPR002251 GO:0005247|GO:0006821|GO:0016020
Blo11g00622 973 PRINTS Plant CLC chloride channel signature 463 471 IPR002251 GO:0005247|GO:0006821|GO:0016020
Blo11g00622 973 PRINTS Plant CLC chloride channel signature 477 487 IPR002251 GO:0005247|GO:0006821|GO:0016020
Blo11g00622 973 Pfam CBS domain 904 956 IPR000644 -
Blo11g00622 973 Gene3D Clc chloride channel 269 770 - -
Blo11g00622 973 TIGRFAM S21p: ribosomal protein bS21 91 148 IPR001911 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g01186 Blo-Chr4:21410641 Blo11g00622 Blo-Chr11:6347279 1.73E-47 dispersed
Blo11g00622 Blo-Chr11:6347279 Blo16g00894 Blo-Chr16:36620751 0 dispersed
Blo11g00622 Blo-Chr11:6347279 Blo02g01193 Blo-Chr2:43656855 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo11g00622 K05016 - zju:107427939 1305.81