Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo11g00670 ATGGAGTCGCGTCGGTTCTTGTTCGATCCGCCGGCTTGCCATGGCAACATGCTGTACCTCGGAAACGGTGATTCTGGATTTCAAGATTCTGATGTTGCTGATGCGTTGAAAATTGGTGAAGGAGTGAGAATGATGATGAGCATGGAAGATACTTCAAGAAGGCGACCCTTTTTTAGCTCGCCAGACGACATGTTCGACGAGGAGTACTACGACGAACAGATGCCGGACAAGAAGCGCCGCCTCACGCAGGAGCAGGTGATTCTTCTGGAGAAGAGCTTTGAGGCAGAAAACAAACTCGAGCCAGACCGAAAGACCCAATTGGCAAACAAGCTTGGGCTGCAGCCGAGGCAAGTTGCTGTGTGGTTTCAGAACCGCCGTGCTCGTTGGAAGACAAAGCAGCTTGAAAGGGAGTACGATGTTCTGAAATCTACATATGATTCACTTCTTTCTAATTATGACTCTGTTGTCAAAGAGAACGAAAAGCTCAAATCCGAGGTTGTTTCCTTATCTGAGAAACTAGGAGCAAAGGAGGCAGTTGTAATTTCAAATCCTCCCAAAAAATCCATCACTTCGACATTAGATATCACACCCATCTCTTCCAATTTTGGCATTAAGTTGGAAGATGGGTGGAGCACGGGAACAGGTGGAAGCACGGTGGTGGATGAGGATGGTCCTCAACTGCTGGACAGTGGCGATTCTTATTTTCTGAGCAATGACTACACTGTCATTGACGGTATGCATTCTGAGGAGGACAACCGAAGTGACGATGGCCGGGGTTGCTTCCACGATGTCTTTGCGCAAAACCATGTGGAGGTAGTGATGTCAGAGAAAGCTCTTAGAGATCTTAATGCTATACCTGAATCCGAGCAGACCAATGCAACCTCCATTAACGGCTGTTTGAAGAAGCCGTGCATAGGGGATGCTGGTGAAAATCTTGAAGAGTGGAAGAAAATAAACTCTGTGTCAATTTCACCTCCAACTAAGGGTGAAAATGCAAACTCAGTCTTGGATTGTGTCACTTCCGAAATAGAATACATCGAGTCTGAAAAACTGAATGATGTGGAAGATGTCAATGGAATCGTGATGACTCTCTTAGCTGGATTGGACTCTAAAGAATGGGTTCTCGTTTGTGAAGCTCTCAACAATGTCCGCAGGCTGTCAATATTTCACAAGGAAGCAATGCTTGACATACTAGGGGACGTGGTATTGTTTGTGGTGAAATCGATGAAAAATCCGAGAAGTGCTTTGTGCAAAACTGCATTAATGACATCTGCTGACATCTTCATTGCTTATTGTGATGAAATAATTGAATCTCTGGACCCTCTGCTAGTGCAGCTTCTTCTTAAATCTTCACAAGATAAACGATTTGTTTGTGAGGCAGCGGAGAGAGCCTTGGTAGCTATGATTACTTCGTTATCCCCTATGCTGTTGTTACCAAAATTGGAATCATATCTAAAAAATGGGAATCCTCGTATTCGGGCAAAGGCGGCGATGTTTTTTAGTCGGAGTGCTCTGCAACTAGGGGTGGAAGGAATTAGAGAATTTGGTATTGATAAGTTGGTCCAAACAGCTTCGTCCCAGCTAAGCGACCAACTTCCTGAATCCAGGGAAGCTGCTCGAATTCTTCTCCTGGAGCTCCAAACCGTGCATGAAAAATCCCACAACTTATCACCGATCATGCCAGGAAATACGAAAGACGACTCGTGGGAGAACTTTTGCTTATCAAATCTCTCTCCTTTAAAAGCTCAAGCAGTCCTGAGAGTGACCAATCTCGCTCGAGATTCTCCCGTCCTGTTTTCATGA 1803 45.26 MESRRFLFDPPACHGNMLYLGNGDSGFQDSDVADALKIGEGVRMMMSMEDTSRRRPFFSSPDDMFDEEYYDEQMPDKKRRLTQEQVILLEKSFEAENKLEPDRKTQLANKLGLQPRQVAVWFQNRRARWKTKQLEREYDVLKSTYDSLLSNYDSVVKENEKLKSEVVSLSEKLGAKEAVVISNPPKKSITSTLDITPISSNFGIKLEDGWSTGTGGSTVVDEDGPQLLDSGDSYFLSNDYTVIDGMHSEEDNRSDDGRGCFHDVFAQNHVEVVMSEKALRDLNAIPESEQTNATSINGCLKKPCIGDAGENLEEWKKINSVSISPPTKGENANSVLDCVTSEIEYIESEKLNDVEDVNGIVMTLLAGLDSKEWVLVCEALNNVRRLSIFHKEAMLDILGDVVLFVVKSMKNPRSALCKTALMTSADIFIAYCDEIIESLDPLLVQLLLKSSQDKRFVCEAAERALVAMITSLSPMLLLPKLESYLKNGNPRIRAKAAMFFSRSALQLGVEGIREFGIDKLVQTASSQLSDQLPESREAARILLLELQTVHEKSHNLSPIMPGNTKDDSWENFCLSNLSPLKAQAVLRVTNLARDSPVLFS 600
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 7393266 7398431 + BLOR03546 Blo11g00670 66870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo11g00670 600 Pfam Homeobox associated leucine zipper 132 173 IPR003106 GO:0006355|GO:0043565
Blo11g00670 600 SMART HOX_1 75 136 IPR001356 GO:0003677
Blo11g00670 600 Gene3D - 335 560 IPR011989 -
Blo11g00670 600 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 275 593 - -
Blo11g00670 600 Gene3D - 70 139 - -
Blo11g00670 600 SMART TOG_3 350 598 IPR034085 -
Blo11g00670 600 Pfam Homeodomain 77 130 IPR001356 GO:0003677
Blo11g00670 600 SUPERFAMILY ARM repeat 355 553 IPR016024 -
Blo11g00670 600 Pfam CLASP N terminal 393 549 IPR024395 -
Blo11g00670 600 PRINTS Lambda-repressor HTH signature 103 112 IPR000047 GO:0003677
Blo11g00670 600 PRINTS Lambda-repressor HTH signature 112 128 IPR000047 GO:0003677
Blo11g00670 600 PANTHER CLASP 275 593 - -
Blo11g00670 600 CDD homeodomain 77 133 IPR001356 GO:0003677
Blo11g00670 600 ProSitePatterns 'Homeobox' domain signature. 107 130 IPR017970 GO:0000981|GO:0006355
Blo11g00670 600 ProSiteProfiles 'Homeobox' domain profile. 72 132 IPR001356 GO:0003677
Blo11g00670 600 Coils Coil 131 172 - -
Blo11g00670 600 SUPERFAMILY Homeodomain-like 61 134 IPR009057 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo10g00465 Blo11g00670 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g00758 Blo-Chr4:7188204 Blo11g00670 Blo-Chr11:7393266 1.96E-39 dispersed
Blo05g00753 Blo-Chr5:27208838 Blo11g00670 Blo-Chr11:7393266 2.43E-38 dispersed
Blo06g00125 Blo-Chr6:5047383 Blo11g00670 Blo-Chr11:7393266 1.26E-24 dispersed
Blo11g00670 Blo-Chr11:7393266 Blo16g00197 Blo-Chr16:4403153 2.46E-37 dispersed
Blo16g00037 Blo-Chr16:1764352 Blo11g00670 Blo-Chr11:7393266 2.01E-23 dispersed
Blo07g00172 Blo-Chr7:2188222 Blo11g00670 Blo-Chr11:7393266 3.07E-40 transposed
Blo07g01368 Blo-Chr7:33810804 Blo11g00670 Blo-Chr11:7393266 8.73E-28 transposed
Blo16g00486 Blo-Chr16:19216042 Blo11g00670 Blo-Chr11:7393266 2.04E-29 transposed
Blo10g00465 Blo-Chr10:9674968 Blo11g00670 Blo-Chr11:7393266 5.62E-141 wgd
Blo11g00670 Blo-Chr11:7393266 Blo18g00351 Blo-Chr18:3655264 3.78E-109 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12936 PF12348 CLASP_N 1.90E-06 CL0020 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo11g00670 - - qsu:112040695 436.032