Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo11g00672 ATGGCCGGAAGGTACTTGTACAAAGATGTTCTTCCGTTTCCGGCGATGGTGACGATGGAGTGTATAAACGTGGGGTTAAATACACTTTTCAAAGCTGCCACTATGAGGGGGATGAATTACCATGTCTTTGTCGTATATGCTTATGCTATTGCAGCTCTTCTTCTCCTCCCTGCGCCCTTTTTCTCCCACAGATCGAGAGGGCTTCCCCCACTCAACTTTTCCATTATGTCTAAAGTGGGTCTTCTTGGATTGATCGGGAGTTCATCTCAGATCATGGGGTTCAAAGGCATCAGTTACAGCTCTCCAACACTTGCTTCATCCATCAGCAATTTGGTTCCTGCTTTCACCTTCGCACTTGCCATTCTTTTCAGAATGGAGAAGTTGGTCTTCAAAAGCACGAGCAGCCAAGCCAAAATACTAGGCACCATAGTATCCATATCAGGAGCATTCGTAGTCACTCTCTACAAGGGTCCACCCATCGTTTTCTCTCTGTCGCGACTCCAGCAACTTCTAACCTCATCGCCGGAACCCAATTGGGTCATCGGAGGTCTTTTATTGACCGGCGAATACATTCTGGTTCCACTCTGGTACATTGTTCAGGCACAAATCATGAAAGAATATCCAGAAGAACTCACAATAGTGTTCTTCTACAATTTAAGTGTCAGTATTATAGCTGCGATTGTTTGTCTGGTCATTGGAACAGATTCAAGTGCTTGGATTCTTAAGCCAAATATGGCATTGGCCTCTGTTTTGTGCTCTGGACTTTTCGGTTCGTGCTTGAGCAATACCGTCCACACATGGGCCCTGCGCTTAAAGGGTCCTGTTTTTGTTGCGATGTTCAAGCCATTGTCGATTGTCATTGCCGTTGCGATGGGCGTTATGTTCATCGGAGACACTCTCCATCTGGGAAGTCTTGTGGGAGCATCGATAATATCGATCGGATTCTACACTGTGATGTGGGGAAAAGCAAGAGAAGTGGTCGATGTAGACGAAGAGCTGGTCATTAGCCACTTGGAATCGCAATCACCGGAGAAGATCCCTCTTTTGCAGAGCCAAAAAAGTGAAAATAAATGA 1074 45.81 MAGRYLYKDVLPFPAMVTMECINVGLNTLFKAATMRGMNYHVFVVYAYAIAALLLLPAPFFSHRSRGLPPLNFSIMSKVGLLGLIGSSSQIMGFKGISYSSPTLASSISNLVPAFTFALAILFRMEKLVFKSTSSQAKILGTIVSISGAFVVTLYKGPPIVFSLSRLQQLLTSSPEPNWVIGGLLLTGEYILVPLWYIVQAQIMKEYPEELTIVFFYNLSVSIIAAIVCLVIGTDSSAWILKPNMALASVLCSGLFGSCLSNTVHTWALRLKGPVFVAMFKPLSIVIAVAMGVMFIGDTLHLGSLVGASIISIGFYTVMWGKAREVVDVDEELVISHLESQSPEKIPLLQSQKSENK 357
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 7513915 7515539 + BLOR03548 Blo11g00672 66872

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo11g00672 357 PANTHER WAT1-RELATED PROTEIN 9 344 - -
Blo11g00672 357 PANTHER WAT1-RELATED PROTEIN 9 344 IPR030184 GO:0016021|GO:0022857
Blo11g00672 357 Pfam EamA-like transporter family 24 153 IPR000620 GO:0016020|GO:0016021
Blo11g00672 357 Pfam EamA-like transporter family 197 319 IPR000620 GO:0016020|GO:0016021
Blo11g00672 357 SUPERFAMILY Multidrug resistance efflux transporter EmrE 224 323 - -
Blo11g00672 357 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 156 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo11g00672 - - - qsu:111986879 492.271
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo11g00672 Blo-Chr11:7513915 Blo16g01151 Blo-Chr16:40037414 4.60E-71 dispersed
Blo10g00468 Blo-Chr10:9752077 Blo11g00672 Blo-Chr11:7513915 4.35E-88 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi14g1391 . Blo11g00672 . . . . . Bma13g00519 . Cmo11g01704 Cma11g01416 . . . . . . Bhi06g00490 . . . Hepe02g1869 . Lcy10g0273 Cla10g01375 Cam10g1234 Cec10g1459 Cco10g1431 Clacu10g1434 Cmu10g2202 Cre10g1584 . . Cone2ag0145 Cone16ag0909 Lsi02g01546 Csa05g02357 Chy04g01478 Cme04g01911 . . . . Bpe09g00484 Bpe11g01556 . . . . . . . . . . . Bhi11g03090 . . . . . . . . . . . . . . Csa03g03911 . Cme09g00341
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Blo02g01177 . 1 670 Nodulin-like Gene Family AT4G19180 55.2 1.1e-209 726.9
Blo03g01511 . 21 284 Nodulin-like Gene Family AT3G45870 69.3 2.8e-97 352.1
Blo03g00917 . 21 284 Nodulin-like Gene Family AT3G45870 68.2 2.2e-94 342.4
Blo11g00672 . 1 355 Nodulin-like Gene Family AT3G28050 60.2 1.1e-120 430.3
Blo02g01034 . 1 345 Nodulin-like Gene Family AT5G47470 63.3 4.0e-110 395.2
Blo03g00425 . 4 312 Nodulin-like Gene Family AT5G47470 50.3 1.9e-80 296.6
Blo11g00672 . 1 325 Nodulin-like Gene Family AT5G40230 55.6 1.9e-96 349.7
Blo11g00672 . 1 325 Nodulin-like Gene Family AT5G40240 54.7 8.3e-97 350.9
Blo18g00793 CCT,ECH 99 353 Nodulin-like Gene Family AT3G53210 61.6 1.3e-88 323.2
Blo01g01580 CCT,ECH 16 272 Nodulin-like Gene Family AT3G53210 61.1 6.2e-86 314.3
Blo01g01133 . 327 579 Nodulin-like Gene Family AT2G37450 61.3 1.6e-81 299.7
Blo13g00756 BCT 100 334 Nodulin-like Gene Family AT2G37450 53.6 2.9e-67 252.3
Blo04g00287 BCT 100 336 Nodulin-like Gene Family AT2G37450 54.5 2.4e-66 249.2
Blo12g00672 CCT 185 421 Nodulin-like Gene Family AT2G37450 51.3 6.7e-64 241.1
Blo01g01133 . 250 591 Nodulin-like Gene Family AT2G37460 65.0 2.2e-124 442.6
Blo13g00756 BCT 12 334 Nodulin-like Gene Family AT2G37460 59.4 1.1e-104 377.1
Blo04g00287 BCT 12 341 Nodulin-like Gene Family AT2G37460 56.7 8.3e-100 360.9
Blo09g00357 BCT 12 358 Nodulin-like Gene Family AT2G37460 53.7 8.0e-95 344.4
Blo17g00181 CCT 14 336 Nodulin-like Gene Family AT2G37460 50.6 7.0e-91 331.3
Blo01g01580 CCT,ECH 1 387 Nodulin-like Gene Family AT1G75500 72.3 6.2e-151 530.8
Blo18g00793 CCT,ECH 95 455 Nodulin-like Gene Family AT1G75500 73.7 6.8e-150 527.3
Blo16g01151 . 9 332 Nodulin-like Gene Family AT1G60050 51.8 2.0e-98 356.3
Blo01g00404 . 5 309 Nodulin-like Gene Family AT1G60050 51.6 1.6e-87 320.1
Blo13g00756 BCT 10 335 Nodulin-like Gene Family AT5G13670 53.4 2.6e-93 339.3
Blo04g00287 BCT 10 363 Nodulin-like Gene Family AT5G13670 50.1 9.7e-93 337.4
Blo01g01133 . 256 560 Nodulin-like Gene Family AT5G13670 50.6 1.7e-84 310.1
Blo13g00756 BCT 14 335 Nodulin-like Gene Family AT2G39510 67.7 7.8e-127 450.7
Blo04g00287 BCT 14 344 Nodulin-like Gene Family AT2G39510 67.2 2.4e-123 439.1
Blo01g01133 . 250 571 Nodulin-like Gene Family AT2G39510 60.5 9.6e-109 390.6
Blo09g00357 BCT 15 337 Nodulin-like Gene Family AT2G39510 54.6 3.0e-94 342.4
Blo12g00672 CCT 152 437 Nodulin-like Gene Family AT2G39510 53.7 1.6e-79 293.5
Blo11g00672 . 4 335 Nodulin-like Gene Family AT4G15540 51.9 8.1e-94 340.9
Blo17g00181 CCT 14 263 Nodulin-like Gene Family AT4G08290 63.4 7.1e-88 320.9
Blo04g00287 BCT 4 262 Nodulin-like Gene Family AT4G08290 50.2 1.1e-64 243.8
Blo01g01133 . 250 488 Nodulin-like Gene Family AT4G08290 53.1 1.6e-63 240.0
Blo09g00357 BCT 8 337 Nodulin-like Gene Family AT4G08300 52.1 2.1e-92 336.3
Blo12g00672 CCT 152 441 Nodulin-like Gene Family AT4G08300 61.4 8.2e-92 334.3
Blo13g00658 . 1 389 Nodulin-like Gene Family AT5G07050 67.1 8.4e-143 503.8
Blo04g00378 BCT 1 405 Nodulin-like Gene Family AT5G07050 64.0 1.4e-137 486.5
Blo09g00357 BCT 9 390 Nodulin-like Gene Family AT5G07050 65.5 4.9e-135 478.0
Blo13g00756 BCT 1 334 Nodulin-like Gene Family AT5G07050 54.1 1.5e-91 333.6
Blo01g01133 . 250 561 Nodulin-like Gene Family AT5G07050 54.7 1.8e-89 326.6
Blo04g00287 BCT 14 336 Nodulin-like Gene Family AT5G07050 53.2 2.6e-88 322.8
Blo09g00357 BCT 12 386 Nodulin-like Gene Family AT3G56620 56.7 5.3e-107 384.8
Blo13g00658 . 12 372 Nodulin-like Gene Family AT3G56620 51.9 3.1e-99 359.0
Blo04g00378 BCT 12 369 Nodulin-like Gene Family AT3G56620 51.4 2.2e-92 336.3
Blo16g01151 . 7 366 Nodulin-like Gene Family AT1G70260 51.9 3.0e-102 369.0
Blo01g00404 . 4 309 Nodulin-like Gene Family AT1G70260 53.5 1.2e-90 330.5
Blo09g00357 BCT 12 378 Nodulin-like Gene Family AT2G40900 58.2 6.3e-111 397.9
Blo13g00658 . 12 374 Nodulin-like Gene Family AT2G40900 51.8 1.1e-102 370.5
Blo01g01580 CCT,ECH 16 352 Nodulin-like Gene Family AT3G18200 57.3 2.8e-103 372.5
Blo18g00793 CCT,ECH 99 427 Nodulin-like Gene Family AT3G18200 56.2 2.6e-101 365.9
Blo17g00181 CCT 11 358 Nodulin-like Gene Family AT1G44800 51.9 1.1e-99 360.5
Blo09g00357 BCT 8 337 Nodulin-like Gene Family AT1G44800 52.1 3.1e-91 332.4
Blo12g00672 CCT 152 448 Nodulin-like Gene Family AT1G44800 57.9 4.0e-91 332.0
Blo03g01511 . 108 381 Nodulin-like Gene Family AT5G45370 69.1 4.1e-104 374.8
Blo03g00917 . 108 380 Nodulin-like Gene Family AT5G45370 65.5 3.3e-98 355.1
Blo09g00357 BCT 15 318 Nodulin-like Gene Family AT1G21890 54.8 4.6e-89 325.1
Blo17g00181 CCT 13 313 Nodulin-like Gene Family AT1G21890 50.5 1.3e-88 323.6
Blo12g00672 CCT 117 397 Nodulin-like Gene Family AT1G21890 56.6 9.6e-87 317.4
Blo13g00658 . 10 313 Nodulin-like Gene Family AT1G21890 51.0 2.9e-83 305.8
Blo13g00756 BCT 11 313 Nodulin-like Gene Family AT1G21890 51.1 1.3e-80 297.0
Blo01g01133 . 250 541 Nodulin-like Gene Family AT1G21890 50.5 1.4e-77 287.0
Blo10g00521 . 1 563 Nodulin-like Gene Family AT1G80530 60.7 8.5e-194 673.7
Blo01g00627 . 5 570 Nodulin-like Gene Family AT1G80530 59.4 1.6e-184 642.9
Blo15g00294 . 4 549 Nodulin-like Gene Family AT1G74780 61.7 3.9e-188 654.8
Blo15g00373 . 13 542 Nodulin-like Gene Family AT4G34950 70.8 6.3e-221 763.8
Blo06g01173 . 6 563 Nodulin-like Gene Family AT5G14120 63.8 3.0e-202 701.8
Blo06g01174 . 6 546 Nodulin-like Gene Family AT5G14120 59.5 3.8e-189 658.3
Blo15g00373 . 3 391 Nodulin-like Gene Family AT2G16660 69.3 1.5e-152 536.2
Blo13g00707 . 21 572 Nodulin-like Gene Family AT2G39210 71.1 1.4e-223 772.7
Blo04g00334 . 289 840 Nodulin-like Gene Family AT2G39210 68.2 5.0e-216 747.7
Blo04g00338 BCT 17 570 Nodulin-like Gene Family AT2G39210 64.0 1.1e-204 709.9
Blo13g00706 . 1 573 Nodulin-like Gene Family AT2G39210 62.7 5.7e-204 707.6
Blo13g00701 BCT 13 569 Nodulin-like Gene Family AT2G39210 64.7 2.3e-197 685.6
Blo04g00337 BCT 22 549 Nodulin-like Gene Family AT2G39210 62.8 8.0e-190 660.6
Blo14g00201 . 14 572 Nodulin-like Gene Family AT2G39210 56.8 1.0e-184 643.7
Blo13g00699 BCT 49 422 Nodulin-like Gene Family AT2G39210 60.2 3.8e-123 439.1
Blo04g00335 . 9 122 Nodulin-like Gene Family AT2G39210 67.5 2.6e-39 160.6
Blo06g01173 . 6 433 Nodulin-like Gene Family AT3G01930 63.7 1.8e-154 542.7
Blo06g01174 . 6 401 Nodulin-like Gene Family AT3G01930 57.7 5.9e-134 474.6
Blo15g00294 . 1 551 Nodulin-like Gene Family AT1G18940 56.3 4.0e-177 618.2
Blo06g01174 . 6 547 Nodulin-like Gene Family AT5G50520 55.1 9.8e-163 570.5
Blo06g01173 . 6 564 Nodulin-like Gene Family AT5G50520 53.2 1.5e-158 556.6
Blo06g01174 . 6 547 Nodulin-like Gene Family AT5G50630 55.1 9.8e-163 570.5
Blo06g01173 . 6 564 Nodulin-like Gene Family AT5G50630 53.2 1.5e-158 556.6
Blo15g00294 . 7 551 Nodulin-like Gene Family AT2G34350 56.0 7.3e-163 570.9
Blo14g00201 . 15 570 Nodulin-like Gene Family AT2G28120 70.8 2.2e-229 792.0
Blo13g00707 . 16 575 Nodulin-like Gene Family AT2G28120 61.8 2.2e-192 669.1
Blo04g00334 . 284 858 Nodulin-like Gene Family AT2G28120 59.1 5.5e-188 654.4
Blo04g00338 BCT 19 583 Nodulin-like Gene Family AT2G28120 58.0 2.7e-179 625.5
Blo13g00701 BCT 27 572 Nodulin-like Gene Family AT2G28120 59.3 2.2e-173 605.9
Blo13g00706 . 1 562 Nodulin-like Gene Family AT2G28120 57.2 1.1e-172 603.6
Blo04g00337 BCT 17 568 Nodulin-like Gene Family AT2G28120 55.1 1.4e-167 586.6
Blo13g00699 BCT 63 422 Nodulin-like Gene Family AT2G28120 58.0 4.8e-107 385.6
Blo01g01722 . 50 247 Nodulin-like Gene Family AT1G76800 70.7 2.5e-68 255.4
Blo18g00140 . 10 211 Nodulin-like Gene Family AT1G76800 67.8 2.0e-65 245.7
Blo17g00128 . 14 212 Nodulin-like Gene Family AT1G76800 62.3 6.7e-61 230.7
Blo13g00235 . 36 213 Nodulin-like Gene Family AT1G76800 68.0 3.7e-59 224.9
Blo13g00254 . 37 224 Nodulin-like Gene Family AT1G76800 60.6 7.4e-52 200.7
Blo04g01298 . 27 214 Nodulin-like Gene Family AT1G76800 59.6 1.7e-51 199.5
Blo04g01315 . 33 227 Nodulin-like Gene Family AT1G76800 56.4 6.3e-51 197.6
Blo01g01722 . 54 248 Nodulin-like Gene Family AT3G25190 61.5 3.1e-59 225.3
Blo18g00140 . 18 208 Nodulin-like Gene Family AT3G25190 64.4 1.7e-57 219.5
Blo04g01315 . 34 229 Nodulin-like Gene Family AT3G25190 62.3 4.2e-56 214.9
Blo13g00254 . 36 226 Nodulin-like Gene Family AT3G25190 63.2 7.2e-56 214.2
Blo17g00128 . 18 213 Nodulin-like Gene Family AT3G25190 59.2 4.4e-53 204.9
Blo13g00235 . 34 216 Nodulin-like Gene Family AT3G25190 60.2 4.4e-53 204.9
Blo04g01298 . 34 214 Nodulin-like Gene Family AT3G25190 53.4 3.7e-44 175.3
Blo01g01722 . 47 247 Nodulin-like Gene Family AT1G21140 69.7 2.5e-71 265.4
Blo18g00140 . 20 211 Nodulin-like Gene Family AT1G21140 70.3 1.2e-68 256.5
Blo17g00128 . 13 212 Nodulin-like Gene Family AT1G21140 65.0 1.5e-63 239.6
Blo13g00235 . 31 216 Nodulin-like Gene Family AT1G21140 66.1 2.3e-61 232.3
Blo04g01298 . 27 214 Nodulin-like Gene Family AT1G21140 60.6 1.2e-54 209.9
Blo13g00254 . 28 224 Nodulin-like Gene Family AT1G21140 59.9 1.6e-54 209.5
Blo04g01315 . 35 227 Nodulin-like Gene Family AT1G21140 58.0 6.8e-53 204.1
Blo01g01722 . 55 244 Nodulin-like Gene Family AT3G43630 73.2 4.7e-70 261.2
Blo18g00140 . 1 210 Nodulin-like Gene Family AT3G43630 67.6 2.6e-68 255.4
Blo17g00128 . 13 211 Nodulin-like Gene Family AT3G43630 66.3 7.3e-63 237.3
Blo13g00235 . 27 216 Nodulin-like Gene Family AT3G43630 66.5 4.0e-61 231.5
Blo04g01298 . 27 214 Nodulin-like Gene Family AT3G43630 62.8 2.1e-54 209.1
Blo13g00254 . 18 221 Nodulin-like Gene Family AT3G43630 57.8 6.2e-54 207.6
Blo04g01315 . 21 224 Nodulin-like Gene Family AT3G43630 54.9 2.2e-51 199.1
Blo18g00140 . 12 211 Nodulin-like Gene Family AT3G43660 72.0 8.0e-70 260.4
Blo01g01722 . 55 247 Nodulin-like Gene Family AT3G43660 71.0 2.3e-69 258.8
Blo17g00128 . 13 212 Nodulin-like Gene Family AT3G43660 63.9 1.6e-62 236.1
Blo13g00235 . 27 215 Nodulin-like Gene Family AT3G43660 63.2 1.4e-58 223.0
Blo13g00254 . 28 224 Nodulin-like Gene Family AT3G43660 59.4 9.4e-55 210.3
Blo04g01298 . 27 214 Nodulin-like Gene Family AT3G43660 60.6 1.5e-52 203.0
Blo04g01315 . 32 227 Nodulin-like Gene Family AT3G43660 57.1 2.6e-52 202.2
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004958 1 1 1 2 2 1 3 1 1 1 2 1 2 1 1 2 1 2 2 1 1 1 1 1 0 1 1 3 1 2 41
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo11g00672 Blo_Chr11 FPKM 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0