Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo11g00727 | ATGGCTTCTCCATCTCTTCTTCTACTGCTCTCCTGTTGTCTAGCATGCATTGTTTCGTCCTCGCAGGCGAGTTCTTATATGCCAAACATTACCAAGCCCAACACGGAAGCGATGAACGTAATAGACGCCTGCTGGCGGACCAAAGCCGACTGGGCGGCTAACCGTCGCGCATTGGCAGACTGCGCGGTGGGCTTTGGAAAGGACGCAATCGGAGGAAAGTTTGGCGATATCTATGTTGTCACTGATTCCTCCGACGACCAGGTCAACCCAAAACCAGGAACATTACGCTACGGTGTTATTCAACTGCAGCCATTGTGGATTGTCTTTGCTAAGAGTATGGTTATTGTCCTAAAAAGTGAGCTAATTGTGACTAGTTTTAAGACAATCGATGGAAGAGGTGTGGACGTGGAAATTGGGAATGGGCCATGCATCACTTTGCAATATGTTAGTCATGTGATTATCCATGGAATTAGCATCCACGACTGTAAACCAAGCAAAGCTGGACTTGTTCGGAGCAGCACTGCACACCTTGGATATCGTCAAGTATCGGACGGAGATGGCATTGATGTATTCGGGTGTTCGCATATTTGGATCGACCACTGCTTCCTCGCCCGCTGCACTGACGGCCTCATCGACGTCATACATGCTTCAACTGCAATAACCATCACCAACAACTATTTCACGCAGCATGATAAAGTGATGCTGCTTGGACACAATGATCAGTATCCCTATGATAAAGTGATGAAAGTCACAGTAGCCTTCAACCGCTTTGGTGTTAACCTCGTTCAGAGGATGCCTAGGGTAAGATTTGGCTATGCCCATGTTGCCAACAATAAATATGAGGAGTGGGAGATGTACGCCATTGGTGGCAGCGCTAATCCAACCATATTCAGTGAAGGAAACCACTTCGTAGCATCTAATCAACCTTATTTCAAACAGGTTACAAAGCGAGAGGTGCTGAGTGGGTGGAAGAACTGGAAATGGAGGTCTTCCAAGGATGTATTTATGAATGGTGCTTACTTTGTGCAATCTGGATGGGGAAGCTGTAGTCCACTTTACAGTCAAAATCAATCATTCCCAGTTGCTCCAGGATCATTGGTTCCTGCTTTAACTCTCAGTGCAGGCCCTTTGCTTTGTTCCATTGGTAAACCTTGTTGA | 1158 | 46.63 | MASPSLLLLLSCCLACIVSSSQASSYMPNITKPNTEAMNVIDACWRTKADWAANRRALADCAVGFGKDAIGGKFGDIYVVTDSSDDQVNPKPGTLRYGVIQLQPLWIVFAKSMVIVLKSELIVTSFKTIDGRGVDVEIGNGPCITLQYVSHVIIHGISIHDCKPSKAGLVRSSTAHLGYRQVSDGDGIDVFGCSHIWIDHCFLARCTDGLIDVIHASTAITITNNYFTQHDKVMLLGHNDQYPYDKVMKVTVAFNRFGVNLVQRMPRVRFGYAHVANNKYEEWEMYAIGGSANPTIFSEGNHFVASNQPYFKQVTKREVLSGWKNWKWRSSKDVFMNGAYFVQSGWGSCSPLYSQNQSFPVAPGSLVPALTLSAGPLLCSIGKPC | 385 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 9288708 | 9290532 | + | BLOR03603 | Blo11g00727 | 66927 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo11g00727 | 385 | Pfam | Pectate lyase | 118 | 303 | IPR002022 | - | |
Blo11g00727 | 385 | Gene3D | - | 38 | 378 | IPR012334 | - | |
Blo11g00727 | 385 | PRINTS | Pollen allergen Amb family signature | 184 | 205 | IPR018082 | - | |
Blo11g00727 | 385 | PRINTS | Pollen allergen Amb family signature | 326 | 350 | IPR018082 | - | |
Blo11g00727 | 385 | PRINTS | Pollen allergen Amb family signature | 356 | 379 | IPR018082 | - | |
Blo11g00727 | 385 | PRINTS | Pollen allergen Amb family signature | 84 | 109 | IPR018082 | - | |
Blo11g00727 | 385 | PRINTS | Pollen allergen Amb family signature | 61 | 78 | IPR018082 | - | |
Blo11g00727 | 385 | PRINTS | Pollen allergen Amb family signature | 264 | 283 | IPR018082 | - | |
Blo11g00727 | 385 | PRINTS | Pollen allergen Amb family signature | 286 | 305 | IPR018082 | - | |
Blo11g00727 | 385 | PRINTS | Pollen allergen Amb family signature | 120 | 136 | IPR018082 | - | |
Blo11g00727 | 385 | PANTHER | PECTATE LYASE | 19 | 384 | - | - | |
Blo11g00727 | 385 | SUPERFAMILY | Pectin lyase-like | 38 | 376 | IPR011050 | - | |
Blo11g00727 | 385 | SMART | amb_all | 112 | 309 | IPR002022 | - | |
Blo11g00727 | 385 | PANTHER | PECTATE LYASE 18-RELATED | 19 | 384 | IPR045032 | GO:0030570 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo11g00727 | Blo-Chr11:9288708 | Blo12g00125 | Blo-Chr12:8720829 | 3.41E-147 | dispersed | |
Blo13g00089 | Blo-Chr13:1548769 | Blo11g00727 | Blo-Chr11:9288708 | 5.48E-102 | dispersed | |
Blo01g01002 | Blo-Chr1:29378370 | Blo11g00727 | Blo-Chr11:9288708 | 0 | wgd | |
Blo11g00727 | Blo-Chr11:9288708 | Blo16g00243 | Blo-Chr16:5643367 | 7.78E-152 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo11g00727 | K01728 | - | zju:107419217 | 586.26 |