Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo11g00762 CCAAATGAAATGGCGTTTTTCCCAGCAAATTTTTTCTTACGTACTTCTCAAGAAGATGCACACCAACCTCCCACCATTAATGGAGTTCTTCCTTCATGCACACCTCAAGATTTTCATGTTGCAATACCGTTTGTAGGGAAGAGATGTAGGCCATTTTCTGGTGTGGATTTGGTAGGGGAAGAAGGGAACAATGGGGAAGACGATCTGTCTGACGATGGGTCACAAATGGGGGAGAAGAAGAAGAGGCTGAATATGGAGCAAGTGAAGACACTTGAGAAGAATTTTGAGTTGGGAAACAAGCTAGAGCCTGAGAGAAAACTGCAGTTGGCTAGGGTTCTTGGTCTGCAACCCAGACAGGTTGCAATCTGGTTTCAGAACAGAAGAGCAAGGTGGAAGACTAAGCAGCTGGAGAAAGACTATGATCTTCTTAAAAGACAGTTTGAAGCCATTAAAGCAGATAATGAGACTCTCCAAGCCAGGAACAAAAAGCTTCAAGAAGAGATGATGGCTTTAAAAGGTAGAAAACCAACAGAATCTATCAACCTCAACAAAGAAACAGAAGGATCTTGTAGTAATAGAAGTGAGAACAGCTCTGATAATAGGCTGGATATCTCCATGACACCACCCATTGACAGCCCTTCTTTTAGACCTTTATTTCCATCGTCTTCTTCGAAGCCTCCAACGATGGCCCATCTCTTTGGAACCTCCTCAAGACCAGACGATCACCTCCAATGGCAGAAAATCGATCAGATGGTTAAAGAAGAAAGCTTAGGCAATATGTTTTGTGGAATTGAAGATCAGTCTGGGTTTTGGCCATTGTTGGAGCAGCAACAATTTAAT 840 42.86 PNEMAFFPANFFLRTSQEDAHQPPTINGVLPSCTPQDFHVAIPFVGKRCRPFSGVDLVGEEGNNGEDDLSDDGSQMGEKKKRLNMEQVKTLEKNFELGNKLEPERKLQLARVLGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQFEAIKADNETLQARNKKLQEEMMALKGRKPTESINLNKETEGSCSNRSENSSDNRLDISMTPPIDSPSFRPLFPSSSSKPPTMAHLFGTSSRPDDHLQWQKIDQMVKEESLGNMFCGIEDQSGFWPLLEQQQFN 280
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 10558154 10568824 - BLOR03638 Blo11g00762 66962
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo11g00762 280 Gene3D - 71 140 - -
Blo11g00762 280 ProSiteProfiles 'Homeobox' domain profile. 74 134 IPR001356 GO:0003677
Blo11g00762 280 Pfam Homeodomain 79 132 IPR001356 GO:0003677
Blo11g00762 280 CDD homeodomain 79 135 IPR001356 GO:0003677
Blo11g00762 280 Pfam Homeobox associated leucine zipper 134 175 IPR003106 GO:0006355|GO:0043565
Blo11g00762 280 ProSitePatterns 'Homeobox' domain signature. 109 132 IPR017970 GO:0000981|GO:0006355
Blo11g00762 280 MobiDBLite consensus disorder prediction 182 207 - -
Blo11g00762 280 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 3 280 IPR045224 GO:0003700
Blo11g00762 280 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-13 3 280 - -
Blo11g00762 280 SUPERFAMILY Homeodomain-like 69 136 IPR009057 -
Blo11g00762 280 Coils Coil 126 174 - -
Blo11g00762 280 PRINTS Lambda-repressor HTH signature 105 114 IPR000047 GO:0003677
Blo11g00762 280 PRINTS Lambda-repressor HTH signature 114 130 IPR000047 GO:0003677
Blo11g00762 280 SMART HOX_1 77 138 IPR001356 GO:0003677
Blo11g00762 280 MobiDBLite consensus disorder prediction 60 80 - -
Blo11g00762 280 MobiDBLite consensus disorder prediction 173 226 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo11g00762 Blo16g01125 CCT
Blo01g00421 Blo11g00762 CCT
Blo11g00762 Blo16g01125 ECH
Blo01g00421 Blo11g00762 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo11g00762 Blo-Chr11:10558154 Blo16g01125 Blo-Chr16:39769985 3.61E-139 dispersed
Blo01g00421 Blo-Chr1:4753880 Blo11g00762 Blo-Chr11:10558154 2.47E-119 wgd
Blo11g00762 Blo-Chr11:10558154 Blo16g00197 Blo-Chr16:4403153 1.32E-32 wgd
Blo11g00762 Blo-Chr11:10558154 Blo04g00758 Blo-Chr4:7188204 1.27E-32 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12941 PF00046 Homeodomain 4.00E-15 CL0123 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo11g00762 K09338 - rcu:8286990 407.142