Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo11g00770 ATGGCAATCAAGTCAAACTCCATTGACGGAAGGACCAGGAGCTCTGTCCAAATTGTTGTGGCAGTTGGATTATGCTGCTTCTTCTACCTATTGGGTGCGTGGCAAAGAAGCGGCTTTGGCAAAGGAGATCGAATAGCGGTAGAGATAATGAAGAAAGGATCCGAATGCGATATACTTCCCAATCTGAGCTTTGAGACCCATCACGGCGGAGAAGCTGGAAATTACAAAGATGACTCGAAAATACTCAAACCGTGCGATGCTCGTTTCACCGATTACACACCCTGCCAAGACCAAAGACGGGCCATGACCTTCCCTCGGGAAAGCATGGTTTATCGAGAGAGGCACTGTCCGAGTGAGGAGGAGAAGCTCAAATGCCTTATTCCCGCGCCCAATGGATATGTCACTCCATTTTCTTGGCCGAAGAGTCGAGACTATGTGCCCTTTGCGAATGCGCCTTATAAGAGTTTGACCGTGGAGAAGGCTATACAAAATTGGATTCAATACGAAGGCAATGTGTTTCGATTTCCCGGTGGTGGAACTCAGTTTCCTCAAGGAGCTGATAAATACATCGACCAGCTTGCTTCGGTTATACCGATACATAATGGGACTGTCCGAACTGCACTAGACACTGGATGTGGGGTTGCTAGCTGGGGAGCTTACCTTTTAGGTAGGAATGTTATTGCGATGTCGTTTGCGCCAAGAGATTCGCATGAAGCACAAGTCCAATTTGCTTTGGAAAGAGGCGTGCCTGCCGTTATTGGTGTTTTAGGCACGATTAAGCTGCCTTACCCAGCTAGAGCTTTCGACATGGCTCACTGCTCTCGTTGTTTAATTCCTTGGGGTGCAAATGATGGAATGTACATGAAGGAAGTCGATCGAGTTCTTAGACCAGGTGGGTATTGGGTACTTTCCGGCCCGCCCATCAACTGGAGAAACTTTTACAAGGCTTGGCAGCGTCCCAAAGAGGAGCTCGAAGAGGAACAGAGAAAGATCGAAGAAATGGCTGAGCTACTGTGTTGGGAAAAGAAGTATGAGGGTAGTGAAATAGCCATTTGGCAGAAACGAGTTAGCATCGATTCGTGCTCTAGCAGAAATAAAGGCTCTGAAGCTACTATTTGCGAATCTACCGAAATAGACGAAGTTTGGTACAAGAAAATGGAGGGGTGCATAACTCCATACCCGAACGAAGCACCTATGGGGGAACTACAGGCCTTCCCAGAAAGGCTATATGCCGTCCCTCCTAGAATTGCTCGTGGATCTGTTCCTGAAGTCTCAGTTGAGACATATCAGGAGGACAACAATTTATGGAAAAGGCACGTGAAGGCTTATCAGAAAATCAATAAATTTATCAGTTCGGGTCGATATCGCAATGTTATGGACATGAATGCCGGTTTAGGAAGTTTTGCTGCAGCAATACACTCATCAAAATTATGGGTTATGAATGTTGTTCCAACCATTGCTGACAAAAATATGTTAGGGGTCATATACGAGCGGGGATTGATCGGCATCTATCATGATTGGTGTGAAGCCTTCTCTACGTACCCAAGGACATACGACCTCATTCATGCTAATGGAGTTTTCAGTCTATACAAGGACAGGTGCAAAATGGAAGACATTCTTTTGGAAATGGACAGGATACTGAGACCAGAAGGAGCAGTCATATTCCGAGAGGAAGTAGATGTTTTAATCCAAGTGAGGAGGACAGTTGCAGGAATGAGGTGGGACACAAAAATGGTGGATCACGAGGATGGTCCTCTTGTGCCTGAGAAGATACTGGTAGCTGTGAAGCAATACTGGGTTGTTGGTCAAAACTCTTCATCCACTCCATGA 1830 46.17 MAIKSNSIDGRTRSSVQIVVAVGLCCFFYLLGAWQRSGFGKGDRIAVEIMKKGSECDILPNLSFETHHGGEAGNYKDDSKILKPCDARFTDYTPCQDQRRAMTFPRESMVYRERHCPSEEEKLKCLIPAPNGYVTPFSWPKSRDYVPFANAPYKSLTVEKAIQNWIQYEGNVFRFPGGGTQFPQGADKYIDQLASVIPIHNGTVRTALDTGCGVASWGAYLLGRNVIAMSFAPRDSHEAQVQFALERGVPAVIGVLGTIKLPYPARAFDMAHCSRCLIPWGANDGMYMKEVDRVLRPGGYWVLSGPPINWRNFYKAWQRPKEELEEEQRKIEEMAELLCWEKKYEGSEIAIWQKRVSIDSCSSRNKGSEATICESTEIDEVWYKKMEGCITPYPNEAPMGELQAFPERLYAVPPRIARGSVPEVSVETYQEDNNLWKRHVKAYQKINKFISSGRYRNVMDMNAGLGSFAAAIHSSKLWVMNVVPTIADKNMLGVIYERGLIGIYHDWCEAFSTYPRTYDLIHANGVFSLYKDRCKMEDILLEMDRILRPEGAVIFREEVDVLIQVRRTVAGMRWDTKMVDHEDGPLVPEKILVAVKQYWVVGQNSSSTP 609
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 11043836 11046490 - BLOR03646 Blo11g00770 66970

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo11g00770 609 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 442 558 IPR029063 -
Blo11g00770 609 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 2 604 IPR004159 GO:0008168
Blo11g00770 609 Gene3D Vaccinia Virus protein VP39 159 357 IPR029063 -
Blo11g00770 609 Coils Coil 321 341 - -
Blo11g00770 609 Gene3D Vaccinia Virus protein VP39 424 585 IPR029063 -
Blo11g00770 609 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 91 596 IPR004159 GO:0008168
Blo11g00770 609 PANTHER METHYLTRANSFERASE PMT2-RELATED 2 604 - -
Blo11g00770 609 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 113 327 IPR029063 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo11g00770 - - - jre:108988781 1065.45
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Blo06g00905 Blo11g00770 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g00783 Blo-Chr3:32673609 Blo11g00770 Blo-Chr11:11043836 0 dispersed
Blo11g00770 Blo-Chr11:11043836 Blo16g00188 Blo-Chr16:4242243 0 dispersed
Blo03g00109 Blo-Chr3:3394927 Blo11g00770 Blo-Chr11:11043836 0 transposed
Blo11g00770 Blo-Chr11:11043836 Blo06g00905 Blo-Chr6:32316121 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g905 . . . . . Bpe10g00868 Bma14g01641 Bma15g00160 . . . . . . . . . . . . . . . . . . . . . . . . . Cone6ag0590 Cone9ag0593 . . . . Blo06g00905 Blo11g00770 . . Bpe11g01640 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004647 1 1 2 3 3 1 2 1 1 1 1 1 2 1 1 2 1 3 1 1 1 1 1 1 1 1 1 2 1 2 42
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo11g00770 Blo_Chr11 FPKM 21.153658 31.218796 28.143782 29.835535 30.769674 18.314402 31.188604 25.592333 27.13344 26.951389