Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo11g00772 ATGCTCACCCGGTTAACCAAACAACCTCAGGGCAACAAAAGGGTTCCACAATCAGTCAGCGCCATCTTAAGGATGACGACTACCATTGTTGTTTCTCTAGCTCAGTCATCGATCTGTTATCGCTTCAATTCTCCAGCGTTTCATCTCCCTAAATCTTCACCGAAACAAACTCGTTCAATTTTTCTGAACTCTCTCGCACCGCTATCTCTGCGATGCTCGCCCTTCTCGTTGAAATCTGTTTCTACCAGACGATTGAGTGTGACTTGCTCTGTTGATTCTGAAGATGAATCGAAGCGTAATTTTCAGGTTAAGGGGAATGGGCTGGACTTAACCATTTTGAAGAGGTGGGAGGTGCCATGGGGATGGCAAACAGTTTCATTAACTTCACTTGCTGTTGGGTTAAGTTTTGTTTTGACAGGATTGGTGGAAACCGCTGCTATACCTTATCTTGGGTTTCACCTCGAAGAGCTAAGTTTGGACGAGAAAGCAGAGATACTTTTTGTTGATCAAGGCATCACAACTGCAGCTGTGCTTGTGATTTTATATAGTATCGCCAACCAATTTCAACCTCTTCCTGAAGACTTGTATCGCTACGATCTTAGAGATCCTTTAAGTCTGCAGAAAGGCTGGTTCTTATGGGCCGGGATTGGTCTGCTTGGTGCCCTGGGTGCCATTGCAGCAACCGGAGTTGTAGTGTCCTATTTCAGTGGTGGTACCCCAGCAAGAGAGACTGATGCTCTTGTTCGTTTGCTTCCACTGATTGGTTCTTCCACAATCAGTACTGCTTGCTTGTTGGGCATAACTGGTGTCCTTGCTCCACTTCTTGAGGAGACTGTGTTCCGAGGATTCTTTATGGTGTCTCTAACTAAATGGGTTCCTGCTCCAATTGCTGTATTTATAAGTGCATCAGTATTTGCCCTCGCTCATCTCACCCCTGGAGAGTTTCCCCAGCTATTTGTTCTAGGCACTGCTTTGGGCTTTTCTTACGCTCATACTCGCAATCTTTTGACCCCAATCACAATACATGCTTTCTGGAACTCGGGAGTGATATTGCTTCTCACATTCTTACAATACAAGAAGGTTCCTGTTCTTGTGCACAAAGGCAAGCCCCTAGCTGAATCTCTTCCCATCCTCGAATATATCGATGAATGTTGGAATCAAGCTCCTAAATTACTCCCAGCTTATCCTTATCGTAGATCTAAAATCCGCTTTTGGGCACAATTTTATGATCAGAAAATCATGCCGGCGGCACTTCCGATCATCAAATCAGAGGGGCAGGAGCGAGAAAAAGCAATAGAAGAATTCAACAAGTTGTTGAGTGTTTTCGAAGCAGGAACCGAGAAAGATTTTCCCGGAAAATTTGAGTTCTTCTGCAGTGATAATTTAGGACTTTTAGAGATTGTTGTGGGTGTACATGCTTGTAATTATAAAGCATTTCATCAGGTCGTTACAGAAGTTATGGAACCAGAAAAGAATTCAGCATTTTTTTCAAAGGTGAAAGCTTTAATGGAACACCCTCAGATGAAGGAGACGATTCCTCCTCACCAGCAATTGGTGGCCAAGATGGCTGAGAAGTACTTCGGAAAAGGCATGAAATGGGAATGA 1605 43.99 MLTRLTKQPQGNKRVPQSVSAILRMTTTIVVSLAQSSICYRFNSPAFHLPKSSPKQTRSIFLNSLAPLSLRCSPFSLKSVSTRRLSVTCSVDSEDESKRNFQVKGNGLDLTILKRWEVPWGWQTVSLTSLAVGLSFVLTGLVETAAIPYLGFHLEELSLDEKAEILFVDQGITTAAVLVILYSIANQFQPLPEDLYRYDLRDPLSLQKGWFLWAGIGLLGALGAIAATGVVVSYFSGGTPARETDALVRLLPLIGSSTISTACLLGITGVLAPLLEETVFRGFFMVSLTKWVPAPIAVFISASVFALAHLTPGEFPQLFVLGTALGFSYAHTRNLLTPITIHAFWNSGVILLLTFLQYKKVPVLVHKGKPLAESLPILEYIDECWNQAPKLLPAYPYRRSKIRFWAQFYDQKIMPAALPIIKSEGQEREKAIEEFNKLLSVFEAGTEKDFPGKFEFFCSDNLGLLEIVVGVHACNYKAFHQVVTEVMEPEKNSAFFSKVKALMEHPQMKETIPPHQQLVAKMAEKYFGKGMKWE 534
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 11094052 11101820 + BLOR03648 Blo11g00772 66972

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo11g00772 534 Pfam Type II CAAX prenyl endopeptidase Rce1-like 265 346 IPR003675 GO:0004222|GO:0016020|GO:0071586
Blo11g00772 534 Pfam Glutathione S-transferase, N-terminal domain 358 383 IPR004045 -
Blo11g00772 534 PANTHER CAAX AMINO TERMINAL PROTEASE 60 360 - -
Blo11g00772 534 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 395 522 IPR010987 -
Blo11g00772 534 SUPERFAMILY Thioredoxin-like 355 391 IPR036249 -
Blo11g00772 534 CDD GST_C_Tau 396 520 IPR045074 GO:0004364|GO:0006749
Blo11g00772 534 Gene3D - 392 529 - -
Blo11g00772 534 SUPERFAMILY GST C-terminal domain-like 383 520 IPR036282 -
Blo11g00772 534 PANTHER CAAX AMINO TERMINAL PROTEASE FAMILY PROTEIN 60 360 - -
Blo11g00772 534 Gene3D Glutaredoxin 342 391 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo11g00772 K07052 K07052; CAAX protease family protein - mnt:21384633 427.172
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo11g00772 Blo-Chr11:11094052 Blo18g00153 Blo-Chr18:1398717 8.44E-36 dispersed
Blo04g00690 Blo-Chr4:6288539 Blo11g00772 Blo-Chr11:11094052 3.80E-15 transposed
Blo11g00772 Blo-Chr11:11094052 Blo16g00186 Blo-Chr16:4216258 6.21E-20 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g906 . . . . . . Bma14g01642 . Cmo04g01732 Cmo18g01177 . Cma18g01156 . Car18g01065 Sed01g3541 Cpe09g00174 Cpe01g01462 Bhi07g01572 Tan04g1086 Cmetu10g1335 Lac13g0313 Hepe10g1736 . . Cla05g02447 Cam05g2633 Cec05g2666 Cco05g2704 Clacu05g2636 Cmu05g2490 Cre05g2603 Cone13ag0957 . . . Lsi04g00430 Csa05g02444 Chy10g00996 Cme10g00421 . Blo11g00772 . . . . . . . . . Cma04g01654 . Car04g01694 . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0009356 0 1 1 2 0 1 2 1 1 1 1 1 2 1 0 3 1 1 2 1 1 1 1 1 1 1 1 1 1 1 33
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo11g00772 Blo_Chr11 FPKM 7.486082 7.289281 3.434268 3.687867 4.035164 5.441282 5.333843 16.96172 15.578524 15.952837