Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo11g00805 ATGGGAAGAGGTAGGGTTCAGTTGAAGAAGATAGAGAACAAGATTAATCGGCAGGTTACATTCTCCAAAAGGAGAAGTGGATTGCTTAAAAAAGCTCATGAAATTTCTGTCTTGTGTGATGCTGATGTTGCTCTGATTGTTTTCTCCAACAAAGGGAAACTCTTTGAATACGCCTCTGATTCTTGCATGGAGAAAATACTTGAGCGTTATGAGAGATACTCTTGTGCTGAAAGACAGCTGCTCTCATCTGAATCTGAAGTGCAGGTGAACTGGAATTTCGAGTATTCAAGACTCAAAGCAAAGATCGAGGTCCTGCAGAAAAACCACAGGCACTATCTTGGGGAAGATTTGGAGTCTATGGGCCTTAAAGGTCTTCAAACTTTAGAGCAGGAGCTAGATACTGCTCTTAAACAAATTCGAAATAGAAAAAACCAGCTAATGCATGAATCAATTTCTGCTCTTCAGAAGAAGGAGAAGTTCATACAGGAGCAAAACACCTTCCTAACAAAGCAGGTAAAACATTTAGGTTTGTACTGTATACTTTCTTTAGCTCTGTCCAAATTGATAAGTAAAGCCCAACTTGTGACGCCAAATCGGATTAAGGAGAAGGATAAGAGTTTAGCACAGCAGGGTATTGAGTGGGACCTCCAAAACATTGGCTCTAATGACTCTTCATTGTTACTACCAAACCCTCTTCCCTCTCTAAACATTTGTGAGAATAACCCAAAAGAAGATGCGCAAGGAATGCCAAGGAATGAGCTTGATCTCACTCTGGAACCAGTTTATAAGTTCCACCTTGGATGCTTTGCTGCTTAA 816 40.56 MGRGRVQLKKIENKINRQVTFSKRRSGLLKKAHEISVLCDADVALIVFSNKGKLFEYASDSCMEKILERYERYSCAERQLLSSESEVQVNWNFEYSRLKAKIEVLQKNHRHYLGEDLESMGLKGLQTLEQELDTALKQIRNRKNQLMHESISALQKKEKFIQEQNTFLTKQVKHLGLYCILSLALSKLISKAQLVTPNRIKEKDKSLAQQGIEWDLQNIGSNDSSLLLPNPLPSLNICENNPKEDAQGMPRNELDLTLEPVYKFHLGCFAA 271
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 12765549 12773707 - BLOR03681 Blo11g00805 67005
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo11g00805 271 Gene3D - 13 86 IPR036879 GO:0003677|GO:0046983
Blo11g00805 271 PANTHER TRUNCATED TRANSCRIPTION FACTOR CAULIFLOWER A 1 252 - -
Blo11g00805 271 PANTHER SERUM RESPONSE FACTOR HOMOLOG 1 252 - -
Blo11g00805 271 SUPERFAMILY SRF-like 2 91 IPR036879 GO:0003677|GO:0046983
Blo11g00805 271 CDD MADS_MEF2_like 2 74 IPR033896 GO:0000977|GO:0045944
Blo11g00805 271 ProSiteProfiles MADS-box domain profile. 1 61 IPR002100 GO:0003677|GO:0046983
Blo11g00805 271 Coils Coil 122 149 - -
Blo11g00805 271 SMART madsneu2 1 60 IPR002100 GO:0003677|GO:0046983
Blo11g00805 271 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
Blo11g00805 271 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Blo11g00805 271 PRINTS MADS domain signature 38 59 IPR002100 GO:0003677|GO:0046983
Blo11g00805 271 ProSiteProfiles K-box domain profile. 88 178 IPR002487 GO:0003700|GO:0005634|GO:0006355
Blo11g00805 271 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 10 57 IPR002100 GO:0003677|GO:0046983
Blo11g00805 271 Pfam K-box region 83 172 IPR002487 GO:0003700|GO:0005634|GO:0006355
Blo11g00805 271 ProSitePatterns MADS-box domain signature. 3 57 IPR002100 GO:0003677|GO:0046983
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo09g00120 Blo-Chr9:2848890 Blo11g00805 Blo-Chr11:12765549 1.07E-46 dispersed
Blo11g00324 Blo-Chr11:2653451 Blo11g00805 Blo-Chr11:12765549 1.53E-50 dispersed
Blo11g00805 Blo-Chr11:12765549 Blo18g00414 Blo-Chr18:4509735 1.20E-50 dispersed
Blo17g00091 Blo-Chr17:696120 Blo11g00805 Blo-Chr11:12765549 1.31E-08 dispersed
Blo04g00007 Blo-Chr4:75548 Blo11g00805 Blo-Chr11:12765549 2.71E-34 transposed
Blo01g00461 Blo-Chr1:5098214 Blo11g00805 Blo-Chr11:12765549 2.52E-81 wgd
Blo11g00805 Blo-Chr11:12765549 Blo06g00941 Blo-Chr6:32637827 1.81E-109 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12947 PF01486 K-box 1.00E-27 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo11g00805 K09264 - qsu:112022353 330.487