Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo11g00805 | ATGGGAAGAGGTAGGGTTCAGTTGAAGAAGATAGAGAACAAGATTAATCGGCAGGTTACATTCTCCAAAAGGAGAAGTGGATTGCTTAAAAAAGCTCATGAAATTTCTGTCTTGTGTGATGCTGATGTTGCTCTGATTGTTTTCTCCAACAAAGGGAAACTCTTTGAATACGCCTCTGATTCTTGCATGGAGAAAATACTTGAGCGTTATGAGAGATACTCTTGTGCTGAAAGACAGCTGCTCTCATCTGAATCTGAAGTGCAGGTGAACTGGAATTTCGAGTATTCAAGACTCAAAGCAAAGATCGAGGTCCTGCAGAAAAACCACAGGCACTATCTTGGGGAAGATTTGGAGTCTATGGGCCTTAAAGGTCTTCAAACTTTAGAGCAGGAGCTAGATACTGCTCTTAAACAAATTCGAAATAGAAAAAACCAGCTAATGCATGAATCAATTTCTGCTCTTCAGAAGAAGGAGAAGTTCATACAGGAGCAAAACACCTTCCTAACAAAGCAGGTAAAACATTTAGGTTTGTACTGTATACTTTCTTTAGCTCTGTCCAAATTGATAAGTAAAGCCCAACTTGTGACGCCAAATCGGATTAAGGAGAAGGATAAGAGTTTAGCACAGCAGGGTATTGAGTGGGACCTCCAAAACATTGGCTCTAATGACTCTTCATTGTTACTACCAAACCCTCTTCCCTCTCTAAACATTTGTGAGAATAACCCAAAAGAAGATGCGCAAGGAATGCCAAGGAATGAGCTTGATCTCACTCTGGAACCAGTTTATAAGTTCCACCTTGGATGCTTTGCTGCTTAA | 816 | 40.56 | MGRGRVQLKKIENKINRQVTFSKRRSGLLKKAHEISVLCDADVALIVFSNKGKLFEYASDSCMEKILERYERYSCAERQLLSSESEVQVNWNFEYSRLKAKIEVLQKNHRHYLGEDLESMGLKGLQTLEQELDTALKQIRNRKNQLMHESISALQKKEKFIQEQNTFLTKQVKHLGLYCILSLALSKLISKAQLVTPNRIKEKDKSLAQQGIEWDLQNIGSNDSSLLLPNPLPSLNICENNPKEDAQGMPRNELDLTLEPVYKFHLGCFAA | 271 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 12765549 | 12773707 | - | BLOR03681 | Blo11g00805 | 67005 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo11g00805 | 271 | Gene3D | - | 13 | 86 | IPR036879 | GO:0003677|GO:0046983 | |
Blo11g00805 | 271 | PANTHER | TRUNCATED TRANSCRIPTION FACTOR CAULIFLOWER A | 1 | 252 | - | - | |
Blo11g00805 | 271 | PANTHER | SERUM RESPONSE FACTOR HOMOLOG | 1 | 252 | - | - | |
Blo11g00805 | 271 | SUPERFAMILY | SRF-like | 2 | 91 | IPR036879 | GO:0003677|GO:0046983 | |
Blo11g00805 | 271 | CDD | MADS_MEF2_like | 2 | 74 | IPR033896 | GO:0000977|GO:0045944 | |
Blo11g00805 | 271 | ProSiteProfiles | MADS-box domain profile. | 1 | 61 | IPR002100 | GO:0003677|GO:0046983 | |
Blo11g00805 | 271 | Coils | Coil | 122 | 149 | - | - | |
Blo11g00805 | 271 | SMART | madsneu2 | 1 | 60 | IPR002100 | GO:0003677|GO:0046983 | |
Blo11g00805 | 271 | PRINTS | MADS domain signature | 3 | 23 | IPR002100 | GO:0003677|GO:0046983 | |
Blo11g00805 | 271 | PRINTS | MADS domain signature | 23 | 38 | IPR002100 | GO:0003677|GO:0046983 | |
Blo11g00805 | 271 | PRINTS | MADS domain signature | 38 | 59 | IPR002100 | GO:0003677|GO:0046983 | |
Blo11g00805 | 271 | ProSiteProfiles | K-box domain profile. | 88 | 178 | IPR002487 | GO:0003700|GO:0005634|GO:0006355 | |
Blo11g00805 | 271 | Pfam | SRF-type transcription factor (DNA-binding and dimerisation domain) | 10 | 57 | IPR002100 | GO:0003677|GO:0046983 | |
Blo11g00805 | 271 | Pfam | K-box region | 83 | 172 | IPR002487 | GO:0003700|GO:0005634|GO:0006355 | |
Blo11g00805 | 271 | ProSitePatterns | MADS-box domain signature. | 3 | 57 | IPR002100 | GO:0003677|GO:0046983 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo09g00120 | Blo-Chr9:2848890 | Blo11g00805 | Blo-Chr11:12765549 | 1.07E-46 | dispersed | |
Blo11g00324 | Blo-Chr11:2653451 | Blo11g00805 | Blo-Chr11:12765549 | 1.53E-50 | dispersed | |
Blo11g00805 | Blo-Chr11:12765549 | Blo18g00414 | Blo-Chr18:4509735 | 1.20E-50 | dispersed | |
Blo17g00091 | Blo-Chr17:696120 | Blo11g00805 | Blo-Chr11:12765549 | 1.31E-08 | dispersed | |
Blo04g00007 | Blo-Chr4:75548 | Blo11g00805 | Blo-Chr11:12765549 | 2.71E-34 | transposed | |
Blo01g00461 | Blo-Chr1:5098214 | Blo11g00805 | Blo-Chr11:12765549 | 2.52E-81 | wgd | |
Blo11g00805 | Blo-Chr11:12765549 | Blo06g00941 | Blo-Chr6:32637827 | 1.81E-109 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
12947 | PF01486 | K-box | 1.00E-27 | No_clan | Blo | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo11g00805 | K09264 | - | qsu:112022353 | 330.487 |