Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo11g00818 ATGGAGAAGCGAGTAGCCCCTATAGCAGCCTCTCCATCATGCTCTTCAGCAATGGAAGCCATAGGCCACTTCACTATTGCCCTAAGAGGTCAACCTGCTCCTCCTGCCGTGCTTACCAAGTCACGTGAACTGATGGATGTTTTCAAGAAGTATGTTTTGGGAAATACTCGGAAGAACCTGGAGACCTGCGCAATTCTTGGGAGAAAGCTGGTCGAGGATGCGTACACCATCACTGAGATCATCTTCCTGGAACAAACCACTAAAAGAAAAGGGTGGATCAATCATGGAATCAAAGGTCCTGAGTCAATAGCTGATCATATGTATCGTATGGCTTTGATGGGATTGATTGCTGAGGACATTCCGGGTGTGAACAGAGAAAGCTTTTTTTGTTGTTATTTTGGAAATAGGTGCATTAAGATTGCTATTGTACATGACATTGCGGAAGCTATTGTTGGAGATATAACACCATCTGATGGAGTGCCCAAAGAGGAAAAGAGCAGAAGAGAGTCGGCAGCATTAAATGAAATGTGTGAGGTTCTTGGTGGAGGGATGAGAGCTGAAGAGATTAAAGAACTTTGGGCAGAGTATGAAAACAATGCTTCTGTTGAAGCTAACCTTGTGAAAGATTTTGACAAAGTATGTACCTTCCAGTACCCTTTTGTCTTCTAG 669 43.65 MEKRVAPIAASPSCSSAMEAIGHFTIALRGQPAPPAVLTKSRELMDVFKKYVLGNTRKNLETCAILGRKLVEDAYTITEIIFLEQTTKRKGWINHGIKGPESIADHMYRMALMGLIAEDIPGVNRESFFCCYFGNRCIKIAIVHDIAEAIVGDITPSDGVPKEEKSRRESAALNEMCEVLGGGMRAEEIKELWAEYENNASVEANLVKDFDKVCTFQYPFVF 222
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 13501908 13510148 + BLOR03694 Blo11g00818 67018

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo11g00818 222 Gene3D Hypothetical protein af1432 68 218 - -
Blo11g00818 222 SUPERFAMILY HD-domain/PDEase-like 80 216 - -
Blo11g00818 222 PANTHER METAL-DEPENDENT PHOSPHOHYDROLASE 85 213 - -
Blo11g00818 222 Pfam HD domain 86 214 IPR006674 -
Blo11g00818 222 PANTHER UNCHARACTERIZED 85 213 IPR039356 GO:0002953
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo11g00818 K07023 YGK1, HDDC2; 5'-deoxynucleotidase [EC:3.1.3.89] - pop:7485934 228.409
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo11g00818 Blo-Chr11:13501908 Blo12g00656 Blo-Chr12:24897713 2.27E-50 dispersed
Blo11g00818 Blo-Chr11:13501908 Blo11g00082 Blo-Chr11:611148 3.63E-53 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g214 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone6ag0488 Cone9ag0500 . . . . . Blo11g00818 Bda07g01514 . Bpe11g01677 . . . . . . . . . . Cpe13g00023 . Bhi12g01430 . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001138 3 2 3 3 3 2 4 2 2 2 2 2 4 2 2 4 2 3 4 2 2 2 2 2 2 1 2 3 6 4 79
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo11g00818 Blo_Chr11 FPKM 6.175925 6.624605 0.200515 0.236698 5.152441 3.761151 4.761225 0.0 0.0 0.0