Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo11g00821 ATGTTCGGGATGGGCGGGATATGCCCATCACTGAAGAAATCCTCTGGCGGGATACGCCGGAAGGGAAGAAACCCTGAAGGCGGGATACGCCGGAAGGGAAGAAACCCTGAAGGCGGGATACGCCAGAAGGGGAGGAACCTTGAAGGCGGGATACACCAGAAAGGGGACGACCGAGGAGTTGGGTCCAATTTGATTCAATGGTCAGCTTCTAAGAGACTGATCTTGGGTGGTCTGGAAAAGAACTTTTATCGGATTCCGCATTATGATATTGACAGAGTCTGTTATAAAGTTCCTCATTCTGCTAAACAGAGGAGGGTTTGTAATAGAAGTGGGAGAAGAAGTTTAGAATGTTGCTGTGTGCATTCTGAAGGAAGTACTGAATTTGATTCTGAGGATGATGCAGAGGCGTTGCTTAGATTGTTGAGTGATGAGGAGGAGAGAGATGAATATTGCGATTGTTGTGAGAGAAGAAGAACATTGTATGAGAGGGTGAACAGGGAGAAGAAACGAAATTATGGGAAGAGAGAAATGGCAATCATGTCATCTAGAAGTGTACTGACGGAGAAGAGGCTGAGAAATAGTGTTGGTAGGAAAAATTTGAGCTCATCAGAAAGCAAAACCATGGATGAGAAAAGGGACGTTTGCTGTAAATGCAACAGAGAGACGGGAAATGGAGGTTCTGATTTCTTAGAGAGAAAATCAAATAATGGAGGCAAGAAAGTAAAAATTGAGCCCAGAAAAGAAAACCATAGAGAGGACAAAGGCATTTCAATTCATTGTAGAGGTGAAATTTACAGAAGAAGGAAAGGTGGTTCTAATAATTCATCTTATTACTCATTCCCTTCATCAGACACTTCAGAAAATGATACTGAAATCATAGACAAGCACAGTCTAATCTCGGAAGAACTTACAAATATGGATAGAAGTGAGGACAAGTTATCAAAAAGAAAATTGAAAGAAGAGATTGAGAAGCGGAATTCGAGGTCTTCTCAGCAAGAAAATTCTTTATTGGAAACTGCTGTTGAATTAGATTCAAGGAAGAAAATTTCTCAAGTATCATCAATTGAAGAAACAAAGTCCGTGGCAGAATCATCCCAGATGCAGCCAAGAGTGTCAATGACCAATGAAAAGGCTTCACGCACACAGAAAAATTTCAATTATGGGAAAGATTATTCTACCTCCACCATGAAAAATAATTTAAGACAAGAGTCTAAATCTCAGAAACAGCATAGACTTGTGAAATTTCAAGAATATGATACAGAGAGTAACTCTTGTCAGCAAAGGAAGTCTAATACAGAAGTGAGTACAAAAGAGAGGACACATTCGGTTAAGGCTTCAGCTCAGGAGACAAACAAGCGACTCAACCAAACTGAAATTTATGTTACTGGAAAGATTGACTCTCGAAAGACATCCCAAAATGTAACTGAAATATCGGTTACCAACGATAGTTATTCTGACAGTGCTATGATTTCTGGGTTTGAAACTATAATAAAGAGCGAGGAACATAAACCTGTTTTGGTTTCTACGACACATAGGGGAAGAGAAAATCTACAGTCTGAGACAGATAAAAGAGGTTCTCTAAAACTCCAATCTGGAAATGTTTCTCAAGATGTGGACATTTCTAAAAAAATAATTAGAACTTCGGAAGAAACTTTCAGAAAGAGAATTGATCATGAAGAAAGAAAGATGCGACTACAGAAAATGGCAGTTATACAATCAAGTAAAGAACATAATCAAACTGGTGATGCGACCTTGCAAATTGAACTGGGAAAAGAGGCTAGTCCTGATGGAGAATCAAGCTTTCAAGCATCTTTGAGGAGTTCGCAAACTAGGACTAATGTGATTGATAAGGAGGAATCTAACAGATTATCAGAGGAAATATTAATTCCTCCCTCATCTCAATTAGTCACTAGGGATGACTTTGGTGCTGAGTTGACCAGTGGAACTATGACTCAAAAAGTTTCTGGCCATACGTCAGAAAGTGGATCTAGTTTTAAAGATAAATCTCATGCTTTACATTATAAATCCTTTAGTTATAGTGGGAGTGGTGAGAGCTACAGGGAGCCCTTATTCATTTCCCCGACTGAAGATGCACTAGGCTCAGCTGCTCGTTTTGAGAAGTCGTCCGCCCAGTTTGTTGGGGAGTTCATCAAGAAAGCAAGGGCTGAAGTCTCAACTTCAGAAATTGAGAAGGAAGAAAAGGTGTATGGAACGAATCTGATGTATGAAGGGGAGAAGAAAATCCCAAGGAGTTCAAGTTGTTCTGGTTCAGTAGACATTGAAATGAAGGATCATGACTCACAAGGATCATCTCAGGGTTCTGGAATGAAGGGTCCCGATGATGAAATGTGGCATGTTACTGAACCAGCTGTTGAGAAGTCTTCGAATGTAGAAGAACTGAAGGGCAGCTCAGAAACTGTAGATGCCATTGTGAAGAGAAGTGGTAGGTCTTTGTGGAATATTATTGGGGATATAGTTCGGCTAAGATGGGTTTCACGTCCTGAAACCTCCAAAATATCTAAAAAATCTGGCGGAAAATCTTCTTCCAGTGAATCGAACAGTAATGAAACATGGTTTTCTGGCCGTGAGCCTGAAGTAACCATTGACAACGATACAGAAACAGGCAAAATTACGCTAACAGAATCCACATCTTCAGAACGGTTGGAAGTTGAGAAAACTTCTACTCAAATTGAAGAGGCTTCAAATAAAACTGAATCAGAGAATGTTAAGTATCATGACGCAGATCCATCATCTCCTCTTAGTATTAAGGGAAGCGGGTCAGCATCAGGAGGCAACTTGTTGGTTTCTGAAGAGGAAGTTTCAGGTTCAAGAGAAGATGGAAATAGACTTCCAGTTGTTTCTTTGGGTGCAGGGATTAGACTGTCATCATTACCTTTACCTGCTGAGAGCAAAAGTAAATACCGCATTGCTGAAAACATTTCACTTGGTGGAACCGATGCCTCTGGTAGTAGCTTAGTGGAGCCCTTGAAGTTGGAGTTATCAAAGCCAGAAGTCAAGGGTGGAGAATTGAAACTGAGGAAGTTCCAAAGAACTGCGCAAGTCTCGAGAGATAGGTTTGATGAATGGGAAGAAGCATATTTAGTCGAGAATGAGCAGCTGAAAATGGACGAAATGTTTATGAGAGAAGCACTTGCCGAAGCGAAAAAAGCTGCTGATATGTGGGAGGTGCCTGTCGGAGCTGTACTCGTGCAGCATGGAAAAATTATTGCTAGGGGATTCAATCTAGTGGAGGAGTTGAGGGATTCCACTGCCCATGCTGAAATAATCTGTATCAGAGAAGCTTCAAATTTACTCAAATCGTGGAGGCTTGCGGAGACTACTCTGTATGTGACACTTGAGCCATGTCCCATGTGTGCGGGCGCAATATTGCAAGCACGTGTCAACACCCTTGTGTGGGGAGCACCAAATAAGCTTCTTGGAGCTGATGGCAGCTGGATTAGACTTTTTCCGGACGGAGGAGAAGGAAATGGGTCGGTAATGACAGACAAACCGGCTGCTCCTGTCCATCCATTCCACCCAAATATGAGAGTTCGTCGAGGGGTACTATCAGCAGAGTGTGCAGATGCGATGCAGCAATTTTTCCAGCGGAGGAGGAGAAAGAAGGAGAAAGAAGAGGGCTCCCCCCAAGCCACTCCCTCATGCCTACCAGTTACACACTCTTCAGCCAAACTCATGAACAAAATGCATGATCTTTTCCATCTGATGTTCTGTTTGTGA 3738 41.84 MFGMGGICPSLKKSSGGIRRKGRNPEGGIRRKGRNPEGGIRQKGRNLEGGIHQKGDDRGVGSNLIQWSASKRLILGGLEKNFYRIPHYDIDRVCYKVPHSAKQRRVCNRSGRRSLECCCVHSEGSTEFDSEDDAEALLRLLSDEEERDEYCDCCERRRTLYERVNREKKRNYGKREMAIMSSRSVLTEKRLRNSVGRKNLSSSESKTMDEKRDVCCKCNRETGNGGSDFLERKSNNGGKKVKIEPRKENHREDKGISIHCRGEIYRRRKGGSNNSSYYSFPSSDTSENDTEIIDKHSLISEELTNMDRSEDKLSKRKLKEEIEKRNSRSSQQENSLLETAVELDSRKKISQVSSIEETKSVAESSQMQPRVSMTNEKASRTQKNFNYGKDYSTSTMKNNLRQESKSQKQHRLVKFQEYDTESNSCQQRKSNTEVSTKERTHSVKASAQETNKRLNQTEIYVTGKIDSRKTSQNVTEISVTNDSYSDSAMISGFETIIKSEEHKPVLVSTTHRGRENLQSETDKRGSLKLQSGNVSQDVDISKKIIRTSEETFRKRIDHEERKMRLQKMAVIQSSKEHNQTGDATLQIELGKEASPDGESSFQASLRSSQTRTNVIDKEESNRLSEEILIPPSSQLVTRDDFGAELTSGTMTQKVSGHTSESGSSFKDKSHALHYKSFSYSGSGESYREPLFISPTEDALGSAARFEKSSAQFVGEFIKKARAEVSTSEIEKEEKVYGTNLMYEGEKKIPRSSSCSGSVDIEMKDHDSQGSSQGSGMKGPDDEMWHVTEPAVEKSSNVEELKGSSETVDAIVKRSGRSLWNIIGDIVRLRWVSRPETSKISKKSGGKSSSSESNSNETWFSGREPEVTIDNDTETGKITLTESTSSERLEVEKTSTQIEEASNKTESENVKYHDADPSSPLSIKGSGSASGGNLLVSEEEVSGSREDGNRLPVVSLGAGIRLSSLPLPAESKSKYRIAENISLGGTDASGSSLVEPLKLELSKPEVKGGELKLRKFQRTAQVSRDRFDEWEEAYLVENEQLKMDEMFMREALAEAKKAADMWEVPVGAVLVQHGKIIARGFNLVEELRDSTAHAEIICIREASNLLKSWRLAETTLYVTLEPCPMCAGAILQARVNTLVWGAPNKLLGADGSWIRLFPDGGEGNGSVMTDKPAAPVHPFHPNMRVRRGVLSAECADAMQQFFQRRRRKKEKEEGSPQATPSCLPVTHSSAKLMNKMHDLFHLMFCL 1245
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 13588237 13597741 + BLOR03697 Blo11g00821 67021

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo11g00821 1245 PANTHER CYTOSINE DEAMINASE FAMILY MEMBER 793 1235 - -
Blo11g00821 1245 MobiDBLite consensus disorder prediction 1202 1223 - -
Blo11g00821 1245 MobiDBLite consensus disorder prediction 267 289 - -
Blo11g00821 1245 CDD nucleoside_deaminase 1059 1154 - -
Blo11g00821 1245 MobiDBLite consensus disorder prediction 303 450 - -
Blo11g00821 1245 MobiDBLite consensus disorder prediction 748 782 - -
Blo11g00821 1245 MobiDBLite consensus disorder prediction 885 912 - -
Blo11g00821 1245 MobiDBLite consensus disorder prediction 269 287 - -
Blo11g00821 1245 MobiDBLite consensus disorder prediction 354 402 - -
Blo11g00821 1245 Gene3D Cytidine Deaminase, domain 2 1030 1218 - -
Blo11g00821 1245 MobiDBLite consensus disorder prediction 19 55 - -
Blo11g00821 1245 MobiDBLite consensus disorder prediction 303 328 - -
Blo11g00821 1245 MobiDBLite consensus disorder prediction 920 936 - -
Blo11g00821 1245 MobiDBLite consensus disorder prediction 432 446 - -
Blo11g00821 1245 MobiDBLite consensus disorder prediction 834 947 - -
Blo11g00821 1245 MobiDBLite consensus disorder prediction 403 417 - -
Blo11g00821 1245 Coils Coil 315 335 - -
Blo11g00821 1245 PANTHER TRNA(ADENINE(34)) DEAMINASE, CHLOROPLASTIC 793 1235 - -
Blo11g00821 1245 MobiDBLite consensus disorder prediction 1 55 - -
Blo11g00821 1245 MobiDBLite consensus disorder prediction 592 620 - -
Blo11g00821 1245 MobiDBLite consensus disorder prediction 597 611 - -
Blo11g00821 1245 MobiDBLite consensus disorder prediction 841 861 - -
Blo11g00821 1245 SUPERFAMILY Cytidine deaminase-like 1026 1207 IPR016193 GO:0003824
Blo11g00821 1245 ProSiteProfiles Cytidine and deoxycytidylate deaminases domain profile. 1041 1163 IPR002125 -
Blo11g00821 1245 Pfam MafB19-like deaminase 1043 1143 IPR028883 GO:0002100|GO:0008251
Blo11g00821 1245 Hamap tRNA-specific adenosine deaminase [tadA]. 1047 1205 IPR028883 GO:0002100|GO:0008251
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo11g00821 K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] - jre:109004334 737.258
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo11g00821 Blo-Chr11:13588237 Blo17g00818 Blo-Chr17:26471522 7.37E-17 dispersed
Blo11g00821 Blo-Chr11:13588237 Blo04g01237 Blo-Chr4:24235524 1.84E-11 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g220 . . . . . . Bma14g01686 . . Cmo18g01080 . Cma18g01058 . Car18g00983 Sed08g1290 Cpe09g00259 . Bhi07g01388 Tan04g0923 Cmetu02g0302 Lac13g0441 Hepe10g1853 . . Cla05g02348 Cam05g2519 Cec05g2546 Cco05g2588 Clacu05g2514 Cmu05g2376 Cre05g2492 Cone13ag0870 Cone19ag0871 . . Lsi04g00307 Csa05g02561 Chy10g01101 Cme10g00309 . Blo11g00821 Bda07g01517 . Bpe11g01679 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0010359 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 1 1 1 1 32
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo11g00821 Blo_Chr11 FPKM 22.57321 24.701836 26.008322 27.134224 28.012894 27.443512 28.529129 29.017881 25.229605 31.511242