Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo11g00826 ATGTTCACTCCGCAAAGAAGGGCGTTGCCTGCCCTAGTTCTATCGCCTAAAAATGGATCCAATGAATTGCGTTCGAACGCTAGAGGCATTGAAAAAGGGAAGGCCGTGGCTTTTTTCGATGGCCCTCCGCCGCCGTTAAGTACGTTGGGCGTGAATGAGGAAGAGAAGACGATGTTAGGGTTGGATACTGGCGACATGAAGGATTGGAGGAGGTTTAGAGAGGCAGGGCTGTTGGATGAAGCGACATTGGAGTCCAAGAATCTGGAAGCTCTTGTTGAGAAGGTTTCGAAGCTTCAAAATGAGCTTTTTAATTACCAATATAGTATGGGCCTTCTCTTGATGGAGAAGAAAGAGTGGACTTCAAAGAACGAAGACATTGAACGGAAGCTTGCAGAAACTGAGGAGATCATTAAACGTGAACATTCAACTCATCTAATGCTACTATCTGAAGCTGAGAAGAGAGAGGAGAATATGAGGAAAGCCTTAGCTTCTGAAAGGCAGTGTGTTGCTGATCTTGAAAAAGCCTTGCATTGTGTGGATGAGGAGCATGCAGAAAACAAACTTGCATATGAGAAGAAACTGGTTGACACCAAAGTTTTGGGGCTAAAACTTGAAGAAAAATCGTTAGTTGTGGAGGAAAACCTATGTGCCGCCAAAGCTAAGCTTGACGAGGTTAATCGGAAGAGTGCAGAAATAGAACTGAAGATACATGAGATTGATGCTCATCAAAGCATGCTTCAACGAGAACACATGTCCCTTTGTAAAGAGCAAGAAACCTGGAAAAAAACCTTCTATAAAGAAGGGGAAGAATTAAGATGTTGGGAGCAAAATTTGCAGGATAGAGAAGAAAGTTTAAGTCAGAATCGGAAAATTTTTAGCAATAGAGATCTGAAGATAAATGAAAATGATGAGCTTGCTAAAAAGAAAGAGATGAGTCTAGAAGAGGCTGAAAAGAATATTGATTTGTCAAGATCATCTTTGATAGCAAAAGAAGATGACATCAATAAAAAACTTGCAGATCTAGAAGTCAAAGAAAAATGCTTTTATGGGTTCATGATATCTAAGAGTAATGAAGGTGATTCCTTGAGAAGCTTGCTGGAGATGAAACAAAAAGACTTACTAGTTTTGCAAGACAAACTTAGCAGGAGGGAAAGGGTGGAAATTGAGATTTTGCTTGACAATCAAAGAGATATTTTGCAAAGGAAGGAGGAGGAGTTTAAGTTGGAATGGGACGAAAAAAGGCAAGGGTTGGACAAGGAACTTAATGAAAGGGTATGCGGGGTTGCTCAAACAGAAGCTGAAATGAACCATCAAGCAGAGAAGTTAGTAAAGCGAGAGCAAGCACTGGATGAGAAATCAAATAGAGTAAAAACGAAGGAAAAAAATCTTGAAGTCAAGTTGAATACTCTAATGGAGAAGGAGAAAGCTATCAACGCTGAAGACAAAAAATTAGAAACTGGAAGGCAGAAAATGCTTGCTGATGGAGATAATTTGCATTCCCTTTTGGAAGCAGTTGAGAAATTACGAGCAGAAATTATCCATTTGGAACAGCAAGTTGATGAAGAGAGAAAAAAATTAGGGTTGGTCAGAAAAGAGAGATCAGATTACGTGCATTTGCAGCTGGAACTGAAGCAGGAAATTGGGAAATACAGAGTTCAGAAAGACTTGCTCCTTAAAGAAGGTAACAATCTTCAGCAAGACAGAGAGAGGTTTGAGAAAGAATGGGTGCTTTTGGATGAGAAAAGAACTGAAGTTAGTAAGGAGATGAGAAGTCTCGATGAAGAAAGAGAGAAAGTAGAGAAATTGCATCATTCTGTCCATGAGCGAATGAAAAGGGAAAATGATTTGTTACAGGACTATGTACAGAAGGAGTTTGATTATCTCAAACTGCAGAAAGAATCATTTGCAGCTAACATGAAGCATGAGCATCTGGCGCTATCTGAAAAAGCTGAAAGTGAGCATAAAATAATGATTCACGATTTTGAGGTGCATAGAAATAATCTTGATGCACAGTTGAGGAATCAGGAGGGGAATAAAATGCAACAGGAAAGGGATAAAGCACTAGAGGAGGACAAAGAGAAAGAAAAGATTAATATTCAACGCTTGAAAGACATTGTTCAAAGAGAAAGGGAAGATTTGACATCTGAAAGATATCGAATTGAAAAGGAGAAAAAGATGGTTGTATTGGACAGAAAGCAGCTGAAAACTGACCAACTTGAAATAAATAAAGATATTGATAAACTGGATAAGCTGAGCAAGAAACTTAAGCATCAGCGGAAATACCTTATTCAGGAAAGAGGTGATTTCATAAATTTTTTTGAGAAGTTCAAGAGTTGTGAGAACTGTGGTGGAAAAGCTGAGGAATTCATACTAAATGATATCCAACTGCATGAAATAGAGGATCAGGCAGCCATTCGTTTGCCATTAATGGCTGATGGATTGTTGAAGAATTCTCATGGAGATTTAACTGCTCCAAATTTGAACGCTGGCGGTGAGATGTCTTGGCTCCGGAAATGTACGTCTAGGATTTTTAACCTATCTCCTGGTAAAAGGCTAGGAGATGTTCCAGAAGTTCCTTTGGAATCGTCTAAAGCAGAAATACAAGTGCAGGGGCCTAGTGTTTTAGTTAATGATGGGGTTAGAGGGTTGGGACCTCAAATAACATCTATTATTAACAATAAAACGATTGACTCCGAAGGAATTGTCTCCAATAATAAGATCAGTGAAATGGATAATGAATATTTCCCATCAACTGATGATGGCAGCTTCTTAGCTAGTGGGAAAGATGAAGATCCCGAAGTTTCCCTACTATTGGAGTTGAGAAGTGCAACTGGAAATGGAAAAGATCGAAGAAAGTATAACTCTAGATTGCACAGAACACGTTCAGAGAAAGCTGTTGTTGAAGATGCCGAAGTATTTCTTGGGGAAACTCCGGAGAGCCCAGGTCCTTCAAATTTTATTGAGAAAAAAGATGGTAACACAGCTAGGAAAAGGCAACATGCACAAACTTTTAGTGTTACTGACAATGTTCAAGATCCTGGCAATGGTGAGAAGTTTTCTGGCAGTGTCACAGAAGGGGGCAGTAGGAAAAGACGGCAAACGATGACTCCATCAGGGCCAACCCCAGGACAAATGCGATACAATTTGAGACGCACTAGACCTCAACCATTGACTGAGGAGACAAACGACATTGAAGAGAAAGACGCTGGGGAGAAAGATGGAGATTGCTGTACAACAAGCATAGCTCGAGAGCAGAATAACAGGTCCATTCCATCACCAGATGCTCTGGGCAAAAATGCTCAAACTTTGGACATGGCCACGGCAGCAGATTATACTGAGTTGAGGGAGGAGTTAACGGAAAACGAGGCAGAGATGCTGATCCAAGAAGACGAAGAGGAGTATGATGCGTTTTCGGAGATGCCGATCCAAGAAGATGAAGAGGAGTATGACGAATTGGAGCAGATTGATGATCCACCGTCCATAAGTAAAAAAATCTGGACTTTCTTCACTACGTGA 3516 40.36 MFTPQRRALPALVLSPKNGSNELRSNARGIEKGKAVAFFDGPPPPLSTLGVNEEEKTMLGLDTGDMKDWRRFREAGLLDEATLESKNLEALVEKVSKLQNELFNYQYSMGLLLMEKKEWTSKNEDIERKLAETEEIIKREHSTHLMLLSEAEKREENMRKALASERQCVADLEKALHCVDEEHAENKLAYEKKLVDTKVLGLKLEEKSLVVEENLCAAKAKLDEVNRKSAEIELKIHEIDAHQSMLQREHMSLCKEQETWKKTFYKEGEELRCWEQNLQDREESLSQNRKIFSNRDLKINENDELAKKKEMSLEEAEKNIDLSRSSLIAKEDDINKKLADLEVKEKCFYGFMISKSNEGDSLRSLLEMKQKDLLVLQDKLSRRERVEIEILLDNQRDILQRKEEEFKLEWDEKRQGLDKELNERVCGVAQTEAEMNHQAEKLVKREQALDEKSNRVKTKEKNLEVKLNTLMEKEKAINAEDKKLETGRQKMLADGDNLHSLLEAVEKLRAEIIHLEQQVDEERKKLGLVRKERSDYVHLQLELKQEIGKYRVQKDLLLKEGNNLQQDRERFEKEWVLLDEKRTEVSKEMRSLDEEREKVEKLHHSVHERMKRENDLLQDYVQKEFDYLKLQKESFAANMKHEHLALSEKAESEHKIMIHDFEVHRNNLDAQLRNQEGNKMQQERDKALEEDKEKEKINIQRLKDIVQREREDLTSERYRIEKEKKMVVLDRKQLKTDQLEINKDIDKLDKLSKKLKHQRKYLIQERGDFINFFEKFKSCENCGGKAEEFILNDIQLHEIEDQAAIRLPLMADGLLKNSHGDLTAPNLNAGGEMSWLRKCTSRIFNLSPGKRLGDVPEVPLESSKAEIQVQGPSVLVNDGVRGLGPQITSIINNKTIDSEGIVSNNKISEMDNEYFPSTDDGSFLASGKDEDPEVSLLLELRSATGNGKDRRKYNSRLHRTRSEKAVVEDAEVFLGETPESPGPSNFIEKKDGNTARKRQHAQTFSVTDNVQDPGNGEKFSGSVTEGGSRKRRQTMTPSGPTPGQMRYNLRRTRPQPLTEETNDIEEKDAGEKDGDCCTTSIAREQNNRSIPSPDALGKNAQTLDMATAADYTELREELTENEAEMLIQEDEEEYDAFSEMPIQEDEEEYDELEQIDDPPSISKKIWTFFTT 1171
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 14012051 14017920 - BLOR03702 Blo11g00826 67026

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo11g00826 1171 Coils Coil 78 101 - -
Blo11g00826 1171 Coils Coil 498 532 - -
Blo11g00826 1171 MobiDBLite consensus disorder prediction 1079 1096 - -
Blo11g00826 1171 Coils Coil 1111 1131 - -
Blo11g00826 1171 Coils Coil 578 602 - -
Blo11g00826 1171 Coils Coil 665 723 - -
Blo11g00826 1171 MobiDBLite consensus disorder prediction 1056 1078 - -
Blo11g00826 1171 Coils Coil 299 333 - -
Blo11g00826 1171 Coils Coil 385 405 - -
Blo11g00826 1171 PANTHER PROTEIN CROWDED NUCLEI 3 1 1171 - -
Blo11g00826 1171 Coils Coil 554 574 - -
Blo11g00826 1171 PANTHER PROTEIN CROWDED NUCLEI 4 1 1171 IPR040418 GO:0005634|GO:0006997
Blo11g00826 1171 Coils Coil 460 480 - -
Blo11g00826 1171 Coils Coil 116 143 - -
Blo11g00826 1171 MobiDBLite consensus disorder prediction 998 1045 - -
Blo11g00826 1171 MobiDBLite consensus disorder prediction 975 1096 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo11g00826 - - - qsu:112035734 927.161
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo10g00185 Blo-Chr10:2296228 Blo11g00826 Blo-Chr11:14012051 9.85E-171 dispersed
Blo11g00826 Blo-Chr11:14012051 Blo11g00347 Blo-Chr11:2882773 0 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g246 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone13ag0864 Cone19ag0864 . . . Csa05g02073 . . . Blo11g00826 Bda07g01523 . Bpe11g01685 . . . . Cmo04g02051 . . . Car04g01940 . . . Bhi12g00824 . . . . . Lcy10g0868 Cla01g00563 Cam01g0586 Cec01g0578 Cco01g0602 Clacu01g0581 Cmu01g0552 Cre09g1955 Lsi09g00612 . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004989 1 2 1 0 1 1 2 1 1 1 1 1 2 1 1 2 1 2 1 1 1 1 1 3 4 1 1 1 1 1 39
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo11g00826 Blo_Chr11 FPKM 2.294305 1.747239 1.926503 2.335461 7.511938 7.527616 6.109303 2.480417 1.866778 1.975056