Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo11g00830 ATGGATGGAAGTAGCGTTGATGAAAGCATGGCAAGCGAATCTACCTCTATTTCTCCTGTTAGTCCGCTCGCTTTTCCGGTCACAAAGTGTTCTTCGCCGCCCGTGGGTCTGTCAAGAATGGGAAGCGGATCGAGTGTCGTCGTCGATTCCTATCCGTCCACCGGTGTTGAGGCGGAGTCGAGAAAGCTGCCCTCTTCCCGGTTCAAGGGGGTGGTGCCGCAGCCGAATGGGCGGTGGGGGGCGCAGATTTACGAGAAGCACCAGCGAGTCTGGCTCGGCACTTTTAACGAGGAGGACGAGGCAGCCAGAGCCTACGACATCGCCGCCCAGCGCTTCCGCGGTCGCGATGCCGTCACCAATTTCAAGCCACTTGCCGACACCGCCGATGACGAAGTCGAGTTGGCGTTTCTTAGTTCCCATTTGAAATCTGAGATTGTCGATATGCTACGTAAGCATACTTACAGCGATGAGCTACAGCAGAGCAAACGAAAAAATGGGTTACTCGACGGCTCTGGGAAAGGGAGTAGATCCCTAGGGCTAACCGGCACTGGACAGGACCGAGACTCCAAGACTCGTGAACTGCTTTTCGAGAAGGCGGTGACGCCTAGCGACGTTGGAAAACTGAACCGCCTAGTGATCCCGAAGCAACACGCGGAGAAACATTTCCCGTTGCAGAGCGGAACCGCGTCTTCCAAAGGCGTGCTTCTCAACCTTGAGGACGTCGGAGGAAAAGTATGGCGATTCCGCTACTCCTACTGGAATAGCAGCCAAAGCTACGTTCTGACAAAAGGGTGGAGCCGCTTCGTCAAGGAGAAGAACCTCCACGCTGGAGACGTAGTCACCTTCCTACGCTCAACCGGACCGGAGCAACAGCTCTACATTGACTTTAAGGCTAGGAATGGATCGGCGGCGATGGTGGGCGAATCAAATCCAGTGCCACCAGTTCAAATAGTAAGACTCTTTGGGGTGAACATTTTGAAAGTACCTGGACATGGTGGTAGTAATATGGACAGCGCCGTCGCAATGGGTGGTTGCCATGGGAAAAGAATAAGAGATCAGGTTGAGCTTTTAGCTTTAGAGTGCATTAAAAAACAAAGGGTAATTGGAGCTTTG 1113 53.28 MDGSSVDESMASESTSISPVSPLAFPVTKCSSPPVGLSRMGSGSSVVVDSYPSTGVEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDIAAQRFRGRDAVTNFKPLADTADDEVELAFLSSHLKSEIVDMLRKHTYSDELQQSKRKNGLLDGSGKGSRSLGLTGTGQDRDSKTRELLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQSGTASSKGVLLNLEDVGGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLHAGDVVTFLRSTGPEQQLYIDFKARNGSAAMVGESNPVPPVQIVRLFGVNILKVPGHGGSNMDSAVAMGGCHGKRIRDQVELLALECIKKQRVIGAL 371
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 14148534 14149646 + BLOR03706 Blo11g00830 67030
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo11g00830 371 Gene3D AP2/ERF domain 66 123 IPR036955 GO:0003700|GO:0006355
Blo11g00830 371 SUPERFAMILY DNA-binding domain 66 122 IPR016177 GO:0003677
Blo11g00830 371 MobiDBLite consensus disorder prediction 1 25 - -
Blo11g00830 371 Gene3D - 184 308 IPR015300 -
Blo11g00830 371 SMART rav1_2 67 128 IPR001471 GO:0003700|GO:0006355
Blo11g00830 371 PANTHER PROTEIN RAV1, PUTATIVE-RELATED 1 371 - -
Blo11g00830 371 MobiDBLite consensus disorder prediction 160 189 - -
Blo11g00830 371 Pfam B3 DNA binding domain 196 294 IPR003340 GO:0003677
Blo11g00830 371 ProSiteProfiles AP2/ERF domain profile. 67 122 IPR001471 GO:0003700|GO:0006355
Blo11g00830 371 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 1 371 IPR044800 GO:0003700
Blo11g00830 371 ProSiteProfiles B3 DNA-binding domain profile. 196 300 IPR003340 GO:0003677
Blo11g00830 371 CDD AP2 66 121 IPR001471 GO:0003700|GO:0006355
Blo11g00830 371 MobiDBLite consensus disorder prediction 1 22 - -
Blo11g00830 371 CDD B3_DNA 195 282 IPR003340 GO:0003677
Blo11g00830 371 Pfam AP2 domain 67 114 IPR001471 GO:0003700|GO:0006355
Blo11g00830 371 SUPERFAMILY DNA-binding pseudobarrel domain 192 289 IPR015300 -
Blo11g00830 371 SMART B3_2 196 300 IPR003340 GO:0003677
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo06g00971 Blo11g00830 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo06g00971 Blo-Chr6:32997555 Blo11g00830 Blo-Chr11:14148534 0 dispersed
Blo11g00830 Blo-Chr11:14148534 Blo19g00130 Blo-Chr19:3745824 1.77E-45 dispersed
Blo11g00830 Blo-Chr11:14148534 Blo12g00198 Blo-Chr12:12940147 2.60E-49 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12949 PF02362 B3 1.00E-28 CL0405 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo11g00830 K09287 - pvy:116107511 498.819