Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo11g00830 | ATGGATGGAAGTAGCGTTGATGAAAGCATGGCAAGCGAATCTACCTCTATTTCTCCTGTTAGTCCGCTCGCTTTTCCGGTCACAAAGTGTTCTTCGCCGCCCGTGGGTCTGTCAAGAATGGGAAGCGGATCGAGTGTCGTCGTCGATTCCTATCCGTCCACCGGTGTTGAGGCGGAGTCGAGAAAGCTGCCCTCTTCCCGGTTCAAGGGGGTGGTGCCGCAGCCGAATGGGCGGTGGGGGGCGCAGATTTACGAGAAGCACCAGCGAGTCTGGCTCGGCACTTTTAACGAGGAGGACGAGGCAGCCAGAGCCTACGACATCGCCGCCCAGCGCTTCCGCGGTCGCGATGCCGTCACCAATTTCAAGCCACTTGCCGACACCGCCGATGACGAAGTCGAGTTGGCGTTTCTTAGTTCCCATTTGAAATCTGAGATTGTCGATATGCTACGTAAGCATACTTACAGCGATGAGCTACAGCAGAGCAAACGAAAAAATGGGTTACTCGACGGCTCTGGGAAAGGGAGTAGATCCCTAGGGCTAACCGGCACTGGACAGGACCGAGACTCCAAGACTCGTGAACTGCTTTTCGAGAAGGCGGTGACGCCTAGCGACGTTGGAAAACTGAACCGCCTAGTGATCCCGAAGCAACACGCGGAGAAACATTTCCCGTTGCAGAGCGGAACCGCGTCTTCCAAAGGCGTGCTTCTCAACCTTGAGGACGTCGGAGGAAAAGTATGGCGATTCCGCTACTCCTACTGGAATAGCAGCCAAAGCTACGTTCTGACAAAAGGGTGGAGCCGCTTCGTCAAGGAGAAGAACCTCCACGCTGGAGACGTAGTCACCTTCCTACGCTCAACCGGACCGGAGCAACAGCTCTACATTGACTTTAAGGCTAGGAATGGATCGGCGGCGATGGTGGGCGAATCAAATCCAGTGCCACCAGTTCAAATAGTAAGACTCTTTGGGGTGAACATTTTGAAAGTACCTGGACATGGTGGTAGTAATATGGACAGCGCCGTCGCAATGGGTGGTTGCCATGGGAAAAGAATAAGAGATCAGGTTGAGCTTTTAGCTTTAGAGTGCATTAAAAAACAAAGGGTAATTGGAGCTTTG | 1113 | 53.28 | MDGSSVDESMASESTSISPVSPLAFPVTKCSSPPVGLSRMGSGSSVVVDSYPSTGVEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDIAAQRFRGRDAVTNFKPLADTADDEVELAFLSSHLKSEIVDMLRKHTYSDELQQSKRKNGLLDGSGKGSRSLGLTGTGQDRDSKTRELLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQSGTASSKGVLLNLEDVGGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLHAGDVVTFLRSTGPEQQLYIDFKARNGSAAMVGESNPVPPVQIVRLFGVNILKVPGHGGSNMDSAVAMGGCHGKRIRDQVELLALECIKKQRVIGAL | 371 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 14148534 | 14149646 | + | BLOR03706 | Blo11g00830 | 67030 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo11g00830 | 371 | Gene3D | AP2/ERF domain | 66 | 123 | IPR036955 | GO:0003700|GO:0006355 | |
Blo11g00830 | 371 | SUPERFAMILY | DNA-binding domain | 66 | 122 | IPR016177 | GO:0003677 | |
Blo11g00830 | 371 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - | |
Blo11g00830 | 371 | Gene3D | - | 184 | 308 | IPR015300 | - | |
Blo11g00830 | 371 | SMART | rav1_2 | 67 | 128 | IPR001471 | GO:0003700|GO:0006355 | |
Blo11g00830 | 371 | PANTHER | PROTEIN RAV1, PUTATIVE-RELATED | 1 | 371 | - | - | |
Blo11g00830 | 371 | MobiDBLite | consensus disorder prediction | 160 | 189 | - | - | |
Blo11g00830 | 371 | Pfam | B3 DNA binding domain | 196 | 294 | IPR003340 | GO:0003677 | |
Blo11g00830 | 371 | ProSiteProfiles | AP2/ERF domain profile. | 67 | 122 | IPR001471 | GO:0003700|GO:0006355 | |
Blo11g00830 | 371 | PANTHER | B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 | 1 | 371 | IPR044800 | GO:0003700 | |
Blo11g00830 | 371 | ProSiteProfiles | B3 DNA-binding domain profile. | 196 | 300 | IPR003340 | GO:0003677 | |
Blo11g00830 | 371 | CDD | AP2 | 66 | 121 | IPR001471 | GO:0003700|GO:0006355 | |
Blo11g00830 | 371 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
Blo11g00830 | 371 | CDD | B3_DNA | 195 | 282 | IPR003340 | GO:0003677 | |
Blo11g00830 | 371 | Pfam | AP2 domain | 67 | 114 | IPR001471 | GO:0003700|GO:0006355 | |
Blo11g00830 | 371 | SUPERFAMILY | DNA-binding pseudobarrel domain | 192 | 289 | IPR015300 | - | |
Blo11g00830 | 371 | SMART | B3_2 | 196 | 300 | IPR003340 | GO:0003677 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Blo06g00971 | Blo11g00830 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo06g00971 | Blo-Chr6:32997555 | Blo11g00830 | Blo-Chr11:14148534 | 0 | dispersed | |
Blo11g00830 | Blo-Chr11:14148534 | Blo19g00130 | Blo-Chr19:3745824 | 1.77E-45 | dispersed | |
Blo11g00830 | Blo-Chr11:14148534 | Blo12g00198 | Blo-Chr12:12940147 | 2.60E-49 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
12949 | PF02362 | B3 | 1.00E-28 | CL0405 | Blo | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo11g00830 | K09287 | - | pvy:116107511 | 498.819 |