Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo11g00831 ATGATCTTATATAATTGCCGGTTATCACAGTGGAGTTTGTTGGACTGTCTATGGAAGGGTGGGATAGGTGAGAATGGTGGGCCTGATGGCTTGTTGTACGATAACGCGTATGGGGTGATGAGCATGAGAAAACCACCACGTTTTCATAAGCAGCTTGTCATTTTTTCGAAGAGGATTTCGGGTTTGGAGGAGGCTATGAGAATTCGAAGACAAAGAGAGCTTCAGAGTGTGACTAAAGTTAGAAGGAGGCCACCTTTAAGGCGAGGAAGGGTGTCCCCACGTCTCCCTGTGCCTGACCACATACCAAAGCCTCCTTATGTTGGCTCCCCCATTTTACCAGAAATTTCGAAGGATTTTCAAATTCACGATTCTGAAGGCATTGAGCGTATGAGAGCTGCATGTGAGCTTGCTGCTCGTGTCTTAAACTATGCAGGAACGCTAGTTAAGCTTTGGAGCATAGCCTCCCAAATGCACCAGATGATCATCGAGGCAGGTGCTTATCCATCACCTCTTGGCTACGGGGGATTCCCAAAAAGCGTGTGCACATCAGTAAATGAGTGCATGTGCCATGGAATACCAGACTCTCGCCAGTTGCAGAATGGGGATATAATAAACATCGATGTCACGGTTTATCTAAATGGATACCATGGAGACACATCAAAGATGTATTTTTGTGGCGATGTTAGTGATAGAATGAGACGATTGGTAAAGGTAACAGAGGAATGCTTGGCAAAAGGCATAGCTGTTTGCAAGGATGGTGCTAGTTTTAGTAAAATTGGAAAGAGAATTAGCGAGCATGCTGAAAAATATGGTTTTGGGGTGGTGGAGCGATTCGTTGGACATGGTGTTGGGACTGTCTTTCACTCAGAGCCCCTTATCTTTCATAATCGTAATGAGCAGCCGGGTCGCATGGTGGAGGGTCAAACATTTACAATTGAACCAATTCTTACAATGGGAAGCACGGACTGCGCTACCTGGCCGGACAACTGGACCACTCTAGCGACTGACGGTAGCCCTGCTGCTCAGTTTGAGCACACTATCTTAATTACTCGAACCGGAGCCGAAATTTTAACAGAATGTTGA 1083 45.98 MILYNCRLSQWSLLDCLWKGGIGENGGPDGLLYDNAYGVMSMRKPPRFHKQLVIFSKRISGLEEAMRIRRQRELQSVTKVRRRPPLRRGRVSPRLPVPDHIPKPPYVGSPILPEISKDFQIHDSEGIERMRAACELAARVLNYAGTLVKLWSIASQMHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQNGDIINIDVTVYLNGYHGDTSKMYFCGDVSDRMRRLVKVTEECLAKGIAVCKDGASFSKIGKRISEHAEKYGFGVVERFVGHGVGTVFHSEPLIFHNRNEQPGRMVEGQTFTIEPILTMGSTDCATWPDNWTTLATDGSPAAQFEHTILITRTGAEILTEC 360
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 14214829 14220375 + BLOR03707 Blo11g00831 67031

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo11g00831 360 Gene3D Creatinase/methionine aminopeptidase superfamily 84 360 IPR036005 -
Blo11g00831 360 CDD MetAP1 127 359 IPR002467 GO:0006508|GO:0070006
Blo11g00831 360 Hamap Methionine aminopeptidase [map]. 119 360 IPR002467 GO:0006508|GO:0070006
Blo11g00831 360 PRINTS Methionine aminopeptidase-1 signature 180 193 IPR001714 -
Blo11g00831 360 PRINTS Methionine aminopeptidase-1 signature 202 218 IPR001714 -
Blo11g00831 360 PRINTS Methionine aminopeptidase-1 signature 272 284 IPR001714 -
Blo11g00831 360 PRINTS Methionine aminopeptidase-1 signature 302 314 IPR001714 -
Blo11g00831 360 PANTHER METHIONINE AMINOPEPTIDASE 48 359 - -
Blo11g00831 360 Pfam Metallopeptidase family M24 128 350 IPR000994 -
Blo11g00831 360 PANTHER METHIONINE AMINOPEPTIDASE 48 359 - -
Blo11g00831 360 SUPERFAMILY Creatinase/aminopeptidase 82 358 IPR036005 -
Blo11g00831 360 TIGRFAM met_pdase_I: methionine aminopeptidase, type I 121 359 IPR002467 GO:0006508|GO:0070006
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo11g00831 K01265 map; methionyl aminopeptidase [EC:3.4.11.18] - csv:101213374 529.635
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00278 Blo-Chr2:2678174 Blo11g00831 Blo-Chr11:14214829 5.29E-75 dispersed
Blo04g01044 Blo-Chr4:14472870 Blo11g00831 Blo-Chr11:14214829 1.05E-72 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g267 . . . . . . Bma14g01698 . . . . . . . . . . . . . . . . . . . . . . . . . . Cone6ag0467 Cone9ag0479 . . . . . Blo11g00831 . . Bpe11g01691 . . . . . . . . . . . . Bhi12g01373 . . . . . Lcy10g0912 . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002340 1 1 2 1 1 2 0 2 2 2 2 2 2 2 2 2 2 3 2 2 2 3 3 2 3 2 1 5 1 2 59
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo11g00831 Blo_Chr11 FPKM 27.615873 29.821112 31.978474 32.791977 23.651991 32.550591 23.728956 42.647892 44.200871 37.627258