Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo11g00832 ATGGAAGGGGTGGAGGTTGGAGTGGATTTCAGAAAATATGTTGAGGCGCTGGAAGAAGAACGCCAGAAGATACGGGTTTTCCGGCGAGAGCTGCCTCTGTGTTTGGAGCTCATTACGCAAGCTATTGAATCTTGCCGGCAGCAGTTGTCTGGGACGACAACGGAGTACTTCAACGGAGGCCAATCGGAATGCTCAGAGCATAATTCCGGTGAAGTTCCTGTTTTGGAGGAATTCATTCCTGTTAAAAGGTCAGATTTAGTTGATGGAGATGAAGAATCCGACGAGGAGAACAGGATAGATGATAAGAAGGAAGAGGCTCAAACAGATTGGCTTAGATCTGCTCAGCTTTGGAATCAATCTGCCAATTCACCAGTCAAAGAGGATATGCCTAAGAAGAAGCGTATTGTTAGAAATGGAGGAGCTTTCCAGCCATTTCAACGGGATAAGACTGAAGTGATCAAGGCCAATCACCAGTCTCCAGCTCCTGCAGCTGCCGCCAGTTCGACGGCAGAAACAGCCTCCGGCAGCGGTGGTGGTAGCGGCAGACGGGAGGAGAAGGAAGGAGGTGGGCAAACACAAAGAAAGCAGAGGCGGTGCTGGTCGCCGGAGTTGCACAAGCGGTTTTTGCATGCTCTTCAACAGCTAGGAGGCTCCCACGCTGCGACTCCGAAGCAAATCAGAGAGCTAATGAAGGTAGATGGTCTAACAAATGATGAAGTTAAAAGTCACTTACAGAAGTATCGGCTTCATATGAGAAGACCTGGTTCATCAATTAAAAACAATGGCAGTCCTCAACCTCAGTTTGTGGTGGTTGGAGGCATCTGGGTTCCCCCTCCGCGGGCCACAGCAGAGACAATCACCGGTGGCACAGCCAACCGAGTTTACGCTCCAGTGGCAGCTTGA 903 50.17 MEGVEVGVDFRKYVEALEEERQKIRVFRRELPLCLELITQAIESCRQQLSGTTTEYFNGGQSECSEHNSGEVPVLEEFIPVKRSDLVDGDEESDEENRIDDKKEEAQTDWLRSAQLWNQSANSPVKEDMPKKKRIVRNGGAFQPFQRDKTEVIKANHQSPAPAAAASSTAETASGSGGGSGRREEKEGGGQTQRKQRRCWSPELHKRFLHALQQLGGSHAATPKQIRELMKVDGLTNDEVKSHLQKYRLHMRRPGSSIKNNGSPQPQFVVVGGIWVPPPRATAETITGGTANRVYAPVAA 300
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 14222147 14223845 + BLOR03708 Blo11g00832 67032
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo11g00832 300 MobiDBLite consensus disorder prediction 111 125 - -
Blo11g00832 300 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 195 250 IPR006447 GO:0003677
Blo11g00832 300 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 192 252 IPR017930 -
Blo11g00832 300 PANTHER TRANSCRIPTION FACTOR HHO2 10 299 - -
Blo11g00832 300 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 10 299 IPR044787 GO:0003700|GO:0006355
Blo11g00832 300 SUPERFAMILY Homeodomain-like 192 253 IPR009057 -
Blo11g00832 300 Gene3D - 194 252 - -
Blo11g00832 300 Pfam Myb-like DNA-binding domain 197 248 IPR001005 -
Blo11g00832 300 MobiDBLite consensus disorder prediction 180 199 - -
Blo11g00832 300 MobiDBLite consensus disorder prediction 161 176 - -
Blo11g00832 300 MobiDBLite consensus disorder prediction 84 199 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo11g00832 Blo16g01054 CCT
Blo01g00489 Blo11g00832 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00709 Blo-Chr1:8643988 Blo11g00832 Blo-Chr11:14222147 1.27E-72 dispersed
Blo11g00832 Blo-Chr11:14222147 Blo16g00798 Blo-Chr16:33448564 1.39E-69 dispersed
Blo01g00489 Blo-Chr1:5393225 Blo11g00832 Blo-Chr11:14222147 3.13E-107 wgd
Blo11g00832 Blo-Chr11:14222147 Blo16g01054 Blo-Chr16:39063120 2.28E-118 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12950 PF00249 Myb_DNA-binding 3.40E-07 CL0123 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo11g00832 - - vvi:100257723 339.732