Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo11g00832 | ATGGAAGGGGTGGAGGTTGGAGTGGATTTCAGAAAATATGTTGAGGCGCTGGAAGAAGAACGCCAGAAGATACGGGTTTTCCGGCGAGAGCTGCCTCTGTGTTTGGAGCTCATTACGCAAGCTATTGAATCTTGCCGGCAGCAGTTGTCTGGGACGACAACGGAGTACTTCAACGGAGGCCAATCGGAATGCTCAGAGCATAATTCCGGTGAAGTTCCTGTTTTGGAGGAATTCATTCCTGTTAAAAGGTCAGATTTAGTTGATGGAGATGAAGAATCCGACGAGGAGAACAGGATAGATGATAAGAAGGAAGAGGCTCAAACAGATTGGCTTAGATCTGCTCAGCTTTGGAATCAATCTGCCAATTCACCAGTCAAAGAGGATATGCCTAAGAAGAAGCGTATTGTTAGAAATGGAGGAGCTTTCCAGCCATTTCAACGGGATAAGACTGAAGTGATCAAGGCCAATCACCAGTCTCCAGCTCCTGCAGCTGCCGCCAGTTCGACGGCAGAAACAGCCTCCGGCAGCGGTGGTGGTAGCGGCAGACGGGAGGAGAAGGAAGGAGGTGGGCAAACACAAAGAAAGCAGAGGCGGTGCTGGTCGCCGGAGTTGCACAAGCGGTTTTTGCATGCTCTTCAACAGCTAGGAGGCTCCCACGCTGCGACTCCGAAGCAAATCAGAGAGCTAATGAAGGTAGATGGTCTAACAAATGATGAAGTTAAAAGTCACTTACAGAAGTATCGGCTTCATATGAGAAGACCTGGTTCATCAATTAAAAACAATGGCAGTCCTCAACCTCAGTTTGTGGTGGTTGGAGGCATCTGGGTTCCCCCTCCGCGGGCCACAGCAGAGACAATCACCGGTGGCACAGCCAACCGAGTTTACGCTCCAGTGGCAGCTTGA | 903 | 50.17 | MEGVEVGVDFRKYVEALEEERQKIRVFRRELPLCLELITQAIESCRQQLSGTTTEYFNGGQSECSEHNSGEVPVLEEFIPVKRSDLVDGDEESDEENRIDDKKEEAQTDWLRSAQLWNQSANSPVKEDMPKKKRIVRNGGAFQPFQRDKTEVIKANHQSPAPAAAASSTAETASGSGGGSGRREEKEGGGQTQRKQRRCWSPELHKRFLHALQQLGGSHAATPKQIRELMKVDGLTNDEVKSHLQKYRLHMRRPGSSIKNNGSPQPQFVVVGGIWVPPPRATAETITGGTANRVYAPVAA | 300 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 14222147 | 14223845 | + | BLOR03708 | Blo11g00832 | 67032 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo11g00832 | 300 | MobiDBLite | consensus disorder prediction | 111 | 125 | - | - | |
Blo11g00832 | 300 | TIGRFAM | myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class | 195 | 250 | IPR006447 | GO:0003677 | |
Blo11g00832 | 300 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 192 | 252 | IPR017930 | - | |
Blo11g00832 | 300 | PANTHER | TRANSCRIPTION FACTOR HHO2 | 10 | 299 | - | - | |
Blo11g00832 | 300 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR | 10 | 299 | IPR044787 | GO:0003700|GO:0006355 | |
Blo11g00832 | 300 | SUPERFAMILY | Homeodomain-like | 192 | 253 | IPR009057 | - | |
Blo11g00832 | 300 | Gene3D | - | 194 | 252 | - | - | |
Blo11g00832 | 300 | Pfam | Myb-like DNA-binding domain | 197 | 248 | IPR001005 | - | |
Blo11g00832 | 300 | MobiDBLite | consensus disorder prediction | 180 | 199 | - | - | |
Blo11g00832 | 300 | MobiDBLite | consensus disorder prediction | 161 | 176 | - | - | |
Blo11g00832 | 300 | MobiDBLite | consensus disorder prediction | 84 | 199 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Blo11g00832 | Blo16g01054 | CCT | |
Blo01g00489 | Blo11g00832 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo01g00709 | Blo-Chr1:8643988 | Blo11g00832 | Blo-Chr11:14222147 | 1.27E-72 | dispersed | |
Blo11g00832 | Blo-Chr11:14222147 | Blo16g00798 | Blo-Chr16:33448564 | 1.39E-69 | dispersed | |
Blo01g00489 | Blo-Chr1:5393225 | Blo11g00832 | Blo-Chr11:14222147 | 3.13E-107 | wgd | |
Blo11g00832 | Blo-Chr11:14222147 | Blo16g01054 | Blo-Chr16:39063120 | 2.28E-118 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
12950 | PF00249 | Myb_DNA-binding | 3.40E-07 | CL0123 | Blo | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo11g00832 | - | - | vvi:100257723 | 339.732 |