Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo11g00867 ATGGCCACAAACAGGTTCATATGCGAGGTATGCAACAAAGGGTTTCAAAGGGAGCAAAATCTACAGCTCCACAGAAGAGGACATAACCTACCTTGGAAGCTAAAGCAGAAGACTACAAAAGAGCCGAAGAGGAAGGTTTATCTCTGTCCTGAACCCACATGCGTCCACCATGACCCTTCAAGAGCCCTAGGCGACCTTACAGGAATCAAAAAACACTACTCTCGCAAACATGGCGAGAAGAAATGGAAATGTGAGAAGTGTTCCAAAAGGTATGCTGTACAGTCGGATTGGAAAGCTCATTCTAAAACCTGTGGAACGAGGGAGTATCGATGTGACTGTGGCACTCTTTTCTCAAGGCGAGACAGCTTCATCACACACCGCGCTTTCTGTGACGCATTGGCTCAAGAAACTGCGAGACACCCGGCAACCTTGACGACCTCCATTGGTGGTCATTTGTTTGGAGGTGGAAGCAATGTAGGCTTAGGTTTATCTCAAGTGAGTCAACAAATCTCTTCCTTACAAGATCAAACCAACCGGCCAACCGATATTTTACGCCTTGGAGGCGGTGGTGGACGGACCGGGCAATTCAACAGTGTCCTGCATGGCCAGTCAATCCCATCTTCGTTTCGCTCTCCTCAGCCGTCAATGGCTTCCTCAACTTTCTTCATGACAGATCAAACTAATCAGAATTTTCATGAAGAAAGCCTTTCTCAACAAGGGTTTCTTCAGAACAAATCATTTCATGGGCTAATGCAATATTCTGACCTCCAATCCAATCCAAACACTTCTCCAAACCCAAACCTCTTCAACCTAGAGTTCCTATCAAACTCTAACAGCAATACTGAGAACAACAACAACGACAACAATAACAGCAATGTTGGATCCGCAAGTTTCTTGATGTCTAATCAGTTCAACGTCGGAGCAACCGGAAATGGGAGTGAAGCTTCAACTATATTTGCAATGGCAGATCAAGTCGGCTCCAACGCAGTTCCTTCTCTCTACACGACATCTATTCAAAACAACGCCAATATTCCTCACATGTCGGCCACGGCTCTTCTTCAAAAGGCAGCTCAATTAGGCTCGACTTCATCGGCCAACAACACTGGAGCGTCATTGCTCCGATCATTCGGCAGCACTTCCTCCGGAGGAGCAAAATCTGAAAGGTCAATTCGTGCCACTAATATGAACACTATTTTCAGCGAAAACGAGCACCACCATCTCCAAGACCTGATGAACTCATATGCCACCGGGAATTCCGCATTTTTCTCCGGCGGGCCGGGAGAAATCACAGGGTTTGGGGGTTATGACGGTAGCAGAAGGAGTATAGAAAATTTAGAAGAGCAAAAACTTCATCAAACTCCATCAGTAAGCATCGGAGGATCAGATAGGTTAACCAGAGACTTCTTAGGAGTTGGGCAAATTGTTAGAAGCATGAGCGGAGGGTTTTCTCAACGAGAACAAAAACAGCAACTACAACAACAACATCATGAAATGGACCATATTGCCTCCATTAATGCAGATCAGAGCAATTATGCAGCAGCTTCGTCGAGCCATTCCTACGGAGCAGGAGGAGGAAGAGGGAGTTTTCAATGA 1593 46.01 MATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKTTKEPKRKVYLCPEPTCVHHDPSRALGDLTGIKKHYSRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAQETARHPATLTTSIGGHLFGGGSNVGLGLSQVSQQISSLQDQTNRPTDILRLGGGGGRTGQFNSVLHGQSIPSSFRSPQPSMASSTFFMTDQTNQNFHEESLSQQGFLQNKSFHGLMQYSDLQSNPNTSPNPNLFNLEFLSNSNSNTENNNNDNNNSNVGSASFLMSNQFNVGATGNGSEASTIFAMADQVGSNAVPSLYTTSIQNNANIPHMSATALLQKAAQLGSTSSANNTGASLLRSFGSTSSGGAKSERSIRATNMNTIFSENEHHHLQDLMNSYATGNSAFFSGGPGEITGFGGYDGSRRSIENLEEQKLHQTPSVSIGGSDRLTRDFLGVGQIVRSMSGGFSQREQKQQLQQQHHEMDHIASINADQSNYAAASSSHSYGAGGGRGSFQ 530
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 16496454 16499645 - BLOR03743 Blo11g00867 67067
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo11g00867 530 ProSiteProfiles Zinc finger C2H2 type domain profile. 6 28 IPR013087 -
Blo11g00867 530 Gene3D Classic Zinc Finger 60 139 - -
Blo11g00867 530 Pfam Zinc-finger double-stranded RNA-binding 6 28 IPR022755 -
Blo11g00867 530 Gene3D Classic Zinc Finger 6 50 - -
Blo11g00867 530 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 1 487 - -
Blo11g00867 530 SMART c2h2final6 6 28 IPR013087 -
Blo11g00867 530 SMART c2h2final6 82 102 IPR013087 -
Blo11g00867 530 SMART c2h2final6 47 77 IPR013087 -
Blo11g00867 530 SUPERFAMILY beta-beta-alpha zinc fingers 5 102 IPR036236 -
Blo11g00867 530 ProSitePatterns Zinc finger C2H2 type domain signature. 8 28 IPR013087 -
Blo11g00867 530 PANTHER ZINC FINGER PROTEIN, PUTATIVE-RELATED 1 487 - -
Blo11g00867 530 MobiDBLite consensus disorder prediction 253 294 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo06g00985 Blo-Chr6:33134731 Blo11g00867 Blo-Chr11:16496454 0 dispersed
Blo11g00867 Blo-Chr11:16496454 Blo05g00787 Blo-Chr5:28977306 4.94E-94 dispersed
Blo11g00867 Blo-Chr11:16496454 Blo07g01404 Blo-Chr7:34080193 1.35E-91 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12954 PF12171 zf-C2H2_jaz 3.20E-05 CL0361 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo11g00867 K25870 - jre:109006348 608.216