Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo11g00878 ATGTCCATATCGTGCTCTTCCGATTCCTTCTCCGACCTTTTGTGTGATGAGGATTCATCCGGATTCTTGTCCCGACATTCTCTGGAATGCTCGTCCCAAATCGAGTGTGCTTTGGACGTTGAGGAGTCAGTCGCTGCTTGTATGGAAGAGGAGAGGCAATTCGTGCCTGGTTTTGACTATTTCTCTCTATTTCCAACGAGTTCTCTGGACGCATCTGCTAGAGCGGATTCTGTTGCATGGATTCTCCTGACTGCCATCAAGTTCGCTAATAATCTTCAACTAAATGATTCGCAACGCACTATCAACGCCATAGAAAATTCCAATACCAATCGCATCATGTCATTTGTTGATTTGAGCAACGTGAAAACCATAAGCCGTGCTGTTCAAGCCTACTATGGTTTCCATCCATTGACGGCGTATCTGGCTGTTAACTACTTGGATCGGTTCATCTATTCTCATCGCTTGCCGCAAGCAAATGGGTGGCCTTTGCAACTTTTATCTGTTGCTTGCTTGTCACTAGCAGCTAAAATGGAGGAGCCTTTGGCTCCTTGTTTATTGGACCTTCAGGTTGAGGGAGCCAAATATGTATTTGAACCCAAAACAATATGTAGAATGGAGCTTCTTGTGCTGAAAGTCCTAGACTGGCGGTTGAGATCCATAACGCCATACAATTTTATTGAATTCTTTGCGTTCAAGGTTAATCATACAGGAGCTTTCATCAGGTTTCTAATCTCAAGAGCCTCGGAAATTATCTTATCCAATGTCGAAGAAACTAGCTTCCTGGAATACCGACCATCATGCATAGCTGCCACAGCTTTACTTTGTGCAGCAAATGAAATCCCAAGTTTACCTCTTGTTAATCCGGAAGATGCTGAATTATGGTGCAATGGATTAAGCAAAGAAAGACTCATCAAATGTTATCAGTTAACGCAAAAATTGGTGCTTCATGGTAGCCGTAGGAAGCCCCCTAAAATCTTACCACAGCTCCGAGTTACACTTCAGGCTGAAATGAGGCTGATTGACTCATCTCCTCTGCGCTTCTCGTCCTCATCCATGTCTTATAAGAGGAGGAAGTTAAGTACCTGCTTGTGGGTAGTTAATGACAAAGGAAACTCAAAGTGA 1122 43.58 MSISCSSDSFSDLLCDEDSSGFLSRHSLECSSQIECALDVEESVAACMEEERQFVPGFDYFSLFPTSSLDASARADSVAWILLTAIKFANNLQLNDSQRTINAIENSNTNRIMSFVDLSNVKTISRAVQAYYGFHPLTAYLAVNYLDRFIYSHRLPQANGWPLQLLSVACLSLAAKMEEPLAPCLLDLQVEGAKYVFEPKTICRMELLVLKVLDWRLRSITPYNFIEFFAFKVNHTGAFIRFLISRASEIILSNVEETSFLEYRPSCIAATALLCAANEIPSLPLVNPEDAELWCNGLSKERLIKCYQLTQKLVLHGSRRKPPKILPQLRVTLQAEMRLIDSSPLRFSSSSMSYKRRKLSTCLWVVNDKGNSK 373
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 17153410 17155600 + BLOR03754 Blo11g00878 67078
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo11g00878 373 PANTHER CYCLINS 127 362 IPR039361 -
Blo11g00878 373 PANTHER CYCLINS 7 83 IPR039361 -
Blo11g00878 373 SUPERFAMILY Cyclin-like 202 315 IPR036915 -
Blo11g00878 373 SMART Cyclin_C_2 220 354 IPR004367 -
Blo11g00878 373 Pfam Cyclin, C-terminal domain 220 318 IPR004367 -
Blo11g00878 373 SMART cyclin_7 122 211 IPR013763 -
Blo11g00878 373 SUPERFAMILY Cyclin-like 41 217 IPR036915 -
Blo11g00878 373 Pfam Cyclin, N-terminal domain 128 217 IPR006671 -
Blo11g00878 373 CDD CYCLIN 126 210 IPR013763 -
Blo11g00878 373 Gene3D - 212 328 - -
Blo11g00878 373 PANTHER CYCLIN-D1-1 7 83 - -
Blo11g00878 373 Gene3D - 66 211 - -
Blo11g00878 373 PANTHER CYCLIN-D1-1 127 362 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo11g00878 Blo-Chr11:17153410 Blo16g01148 Blo-Chr16:40010602 1.23E-100 dispersed
Blo11g00878 Blo-Chr11:17153410 Blo06g00865 Blo-Chr6:31916799 8.19E-168 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo11g00878 K18810 - vvi:100255261 419.853