Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo11g00904 ATGCAAGCAGTAGCCCTTGCGGAAGAGAGGCATCGCATTGCACAAGAGTGCCATTTGCAAGCAACAGATTGGCACCGTGATATGATGGCAGCACTTGAGCGATGTGAGAGGCGATCAACTCGTGTGTCATCGTCGTCATCAACGGCGGCATCAGCCTCACATCAGCCTCACAGCGGCAGCGGTCAACATGCCGAGAACGAAGAGGACGACGAGAATCGGCCGCTTAGAAGGGTGCACGCGGCTTCAAATTTGATGACCGTGTTCGAGCAATATGTGCGCAGAAATGCTCGAGAGAACAAAGAGACGTGCGCAATTCTTGGGGGAAGGCGGACGGGGGATCATTACGAAGTCACTCATCTCATCTTCCCCGAGCAAGAGGGGACGCCAAATACGTACTGTGCTGAAAACGAGGCAGCCATATTGGCGTATCATCACGAGTACAATATACTCTCAGTAGGGTGGATTCACACACACCCGCAGCAGGGAAGTTTTATGTCGTCCGTTGACCTCCACACTCAGTATGGTTACCAGCAATTGTTGCCAGAAGCTATCTCCATGATCTGTGCTCCCACTGACAAAGACACCCCGTACGCCATCTACCGGTGTACGAGTGTGGGGATGATCGTGCTGCGTAAATGCAACACTAACCAACTATTTCACGAGCATGACCCAGCCATCTTTGACGCCATACCCAAGTCCGACTTTCCTTCTTCTTCGACTCTTGCCTCTGTTCCTACCTGGCTCACCTCCTTCGTCTCCGCTGAAACTCATTGTATTTGGATTCAGAAGCCATCTCTGATCTCCGGAACTTTGAGTGAAATCACTTTGGTTATATCTACTATAGTTGATCTTTTTCCCAGAGATAAGAATGTTAACATTTTTGTTGTGCCTGGAGTTTTCCAGATATCTTTGTCACTTAACGATGCAGACTCAGAATCTTCTTCTGTGTGTCACGAACGGAAAATTGTTGTTGCAAATATGTTACCTTTGCATGCTAAAAGGGATAGCGTGTCTGGCAAATGGTGCTTCAGTTTGGATGAAGATTCACTTTTATTACAATTGAAAGATGGGTTCTCGTCTGACACAGAGGTTATATATGTAGGCTGCCTGAAGGTTGATATTAATGCCAGTGAACAAGAAGAGGTTGCTCAGAGGCTGCTTGACGATTTTAATTGCATACCAACTTTTCTACCTCATGAGCTCCAGAAAAAGTTCTATCTTCGTTTCTGTAAACAACAGTTGTGGCCTTTATTCCATTATATGCTACCTATGTGTCCTGATCACGGTGATCGCTTTGATCGTGTATCTTGGCAAGCATATGTTTCTGCAAACAAAATTTTTGCTGACAAGGTCATGGAAGTTATTAATCCAGAAGATGACTATGTGTGGGTTCATGATTATCATTTGATGGTTCTTCCAACATTTTTGAGGAAGCTCTTTAAACGAGTTAAACTTGGGTTCTTTCTTCATAGTCCATTTCCTTCATCAGAAATTTATCGTACCTTACCAGTTAGGGATGAGATTCTTCGAGGGTTGCTGAACTGTGATCTGATTGGTTTCCATACATTTGATTATGCTCGACACTTCCTTTCATGCTGTAGCAGAATGTTGGGTCTTGACTATGAATCAAAGAGGGGTCACATAGGACTTGATTACTTTGGTCGCACGGTATATATAAAAATTTTACCTGTAGGCATCCACATGGGGCGCCTTGAATCAGTCATGAATCTTCCTGCTACATTTGCTAAGGTCAAAGAGATAAAAGATAAGTTTAAGGGGAAGAAATTGATTCTTGGTGTTGATGACATGGACATCTTTAAAGGCATCAGCTTGAAACTTTTAGCGGTGGAGCAGCTTTTACAACAGCGTCCAGAGGTGCAGGGAAAGATTGTCCTGGTTCAAATTGTAAATCCTGCTAGGGGTTCAGGGAAAGATGTCCAGGAAGCGCAGAAAGAAACTTACTGTACTGCTGAAAGGATCAATGAAGTGTATGGTTCACCTGACTATAAGCCAGTGATTCTAATTGATCGCCCGGTTCCTCGTTTTGAAAAGACTGCATATTATGCTCTAGCGGAATGCTGCTTGGTGAATGCTGTGAGGGATGGAATGAACTTGGTTCCGTACAAGTATATTGTCTGTAGGGAAGGAACTCCATACATGGACGAGGCTATGGGTGTTGAAACTACTTGTCGTCGGACTAGCATGCTTGTAGTTTCTGAGTTCATTGGTTGCTCACCTTCCTTAAGTGGAGCGATCAGGGTGAATCCTTGGGACATTGATGCTGTTGCTGATGCCTTAGATTTGGCCATTAGCATGCAAGATTCGGAGAAACAATTGAGGCATGAGAAGCATTATCGTTATGTCAGTTCGCATGATGTAGGGTATTGGGCTCGCAGCTTCATGCAAGATTTAGAGAGAGCTTGCCAAGATCATTATAGAAAGCGGTGTTGGGGAATTGGATTGGGCCTTAGGTTTAGAGTTGTGGCTCTTTCTCCTGGTTTTAGGAAGTTATGTGTGGACCACATTGTCTCTGGTTATAAACGAACGCACAGAAGAGCAATATTTCTTGATTATGATGGTACTGTCATACAAAAAAATTCAATAATAAAGACCCCAAGCCAAGAAGTCATTTCTGTTCTTAGAGCACTCTGCAATGATCCGAAGAACATTGTGTTTATTGTAAGTGGAAGGGGGAGAATTTCTTTGAGTGAGTGGTTTGCTTCTTGTGACATGCTGGGTCTTGCCGCCGAACATGGCTACTTTACAAGGTGGAGTGGAAATTTAGATTGGGAAATAAGTCCCTTAAATGCTGATCTTGATTGGATTAACATAGTAGATCCTGTTATGCGATTGTATACAGAGGCAACTGATGGTTCTACTATAGAGACTAAAGAGAGCGCATTGGTTTGGCATCATCAGGATGCAGATTCTGACTTTGGGTCCTGCCAAGCAAAAGAACTTCTTGATCATTTAGAAAATGTGCTTGCTAATGAACCAGCCGTTGTGCACAGGGGCCAACATATTGTGGAAGTAAAGCCGCCGCATTTTGTTCTTGTGAAATTCACGGAAATCACAATTAGTTGGTGCTTGGTGGATTGTAAAATTGGGATGGGAATAATAACTAAACAAGGAGTGAGCAAGGGTCTGGTGGCTGAAAAGGTTCTCTTGAAAATGGTGAATGGCGGGAAGCCTCCCGATTTCGTGATGTGTGTAGGAGACGATAGATCAGATGAAGACATGTTTGAGAGCATATTAAACACAATCTCGAGCACTTCCTTGCCAGTAGCTCCTGAGATTTTCGCCTGCACCGTAGGGCGCAAGCCAAGCAAAGCCAAGTTTTATCTTGATGACCCATCAGACGTCGTGAAATTGCTGCAAGGCCTGGCTTCAGTGTCGTGTCCAAAGCCTAGGCATCTCACCCAAACCCACGTATCTTTTGAAAGCATTTTTTGA 3453 44.16 MQAVALAEERHRIAQECHLQATDWHRDMMAALERCERRSTRVSSSSSTAASASHQPHSGSGQHAENEEDDENRPLRRVHAASNLMTVFEQYVRRNARENKETCAILGGRRTGDHYEVTHLIFPEQEGTPNTYCAENEAAILAYHHEYNILSVGWIHTHPQQGSFMSSVDLHTQYGYQQLLPEAISMICAPTDKDTPYAIYRCTSVGMIVLRKCNTNQLFHEHDPAIFDAIPKSDFPSSSTLASVPTWLTSFVSAETHCIWIQKPSLISGTLSEITLVISTIVDLFPRDKNVNIFVVPGVFQISLSLNDADSESSSVCHERKIVVANMLPLHAKRDSVSGKWCFSLDEDSLLLQLKDGFSSDTEVIYVGCLKVDINASEQEEVAQRLLDDFNCIPTFLPHELQKKFYLRFCKQQLWPLFHYMLPMCPDHGDRFDRVSWQAYVSANKIFADKVMEVINPEDDYVWVHDYHLMVLPTFLRKLFKRVKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGIHMGRLESVMNLPATFAKVKEIKDKFKGKKLILGVDDMDIFKGISLKLLAVEQLLQQRPEVQGKIVLVQIVNPARGSGKDVQEAQKETYCTAERINEVYGSPDYKPVILIDRPVPRFEKTAYYALAECCLVNAVRDGMNLVPYKYIVCREGTPYMDEAMGVETTCRRTSMLVVSEFIGCSPSLSGAIRVNPWDIDAVADALDLAISMQDSEKQLRHEKHYRYVSSHDVGYWARSFMQDLERACQDHYRKRCWGIGLGLRFRVVALSPGFRKLCVDHIVSGYKRTHRRAIFLDYDGTVIQKNSIIKTPSQEVISVLRALCNDPKNIVFIVSGRGRISLSEWFASCDMLGLAAEHGYFTRWSGNLDWEISPLNADLDWINIVDPVMRLYTEATDGSTIETKESALVWHHQDADSDFGSCQAKELLDHLENVLANEPAVVHRGQHIVEVKPPHFVLVKFTEITISWCLVDCKIGMGIITKQGVSKGLVAEKVLLKMVNGGKPPDFVMCVGDDRSDEDMFESILNTISSTSLPVAPEIFACTVGRKPSKAKFYLDDPSDVVKLLQGLASVSCPKPRHLTQTHVSFESIF 1150
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 18486430 18495684 - BLOR03780 Blo11g00904 67104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo11g00904 1150 Gene3D Glycogen Phosphorylase B; 313 572 - -
Blo11g00904 1150 Gene3D Glycogen Phosphorylase B; 573 789 - -
Blo11g00904 1150 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 9-RELATED 281 1139 - -
Blo11g00904 1150 MobiDBLite consensus disorder prediction 41 60 - -
Blo11g00904 1150 Gene3D - 851 957 IPR023214 -
Blo11g00904 1150 Gene3D - 965 1142 IPR023214 -
Blo11g00904 1150 CDD GT20_TPS 320 805 IPR001830 GO:0003824|GO:0005992
Blo11g00904 1150 MobiDBLite consensus disorder prediction 35 73 - -
Blo11g00904 1150 CDD HAD_TPP 853 1123 - -
Blo11g00904 1150 SUPERFAMILY JAB1/MPN domain 83 203 - -
Blo11g00904 1150 Pfam Glycosyltransferase family 20 320 805 IPR001830 GO:0003824|GO:0005992
Blo11g00904 1150 Pfam Trehalose-phosphatase 855 1014 IPR003337 GO:0003824|GO:0005992
Blo11g00904 1150 Pfam Trehalose-phosphatase 1042 1119 IPR003337 GO:0003824|GO:0005992
Blo11g00904 1150 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 853 1083 IPR006379 -
Blo11g00904 1150 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 281 1139 IPR001830 GO:0003824|GO:0005992
Blo11g00904 1150 SMART pad1_6 80 205 IPR000555 GO:0005515|GO:0008233|GO:0008237
Blo11g00904 1150 SUPERFAMILY HAD-like 1040 1128 IPR036412 -
Blo11g00904 1150 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 76 181 IPR000555 GO:0005515|GO:0008233|GO:0008237
Blo11g00904 1150 ProSiteProfiles MPN domain profile. 77 206 IPR037518 -
Blo11g00904 1150 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 320 809 - -
Blo11g00904 1150 TIGRFAM T6PP: trehalose-phosphatase 850 1128 IPR003337 GO:0003824|GO:0005992
Blo11g00904 1150 Gene3D Cytidine Deaminase, domain 2 57 240 - -
Blo11g00904 1150 SUPERFAMILY HAD-like 852 1014 IPR036412 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo06g00869 Blo11g00904 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00651 Blo-Chr1:7386227 Blo11g00904 Blo-Chr11:18486430 0 dispersed
Blo11g00904 Blo-Chr11:18486430 Blo15g00275 Blo-Chr15:2979844 0 dispersed
Blo02g00273 Blo-Chr2:2633631 Blo11g00904 Blo-Chr11:18486430 1.91E-82 transposed
Blo13g00275 Blo-Chr13:13895118 Blo11g00904 Blo-Chr11:18486430 2.36E-137 transposed
Blo16g00791 Blo-Chr16:33226434 Blo11g00904 Blo-Chr11:18486430 4.94E-61 transposed
Blo18g00525 Blo-Chr18:6796848 Blo11g00904 Blo-Chr11:18486430 6.15E-57 transposed
Blo11g00904 Blo-Chr11:18486430 Blo06g00869 Blo-Chr6:31980583 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo11g00904 K16055 - csv:101212688 1413.28