Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo11g00917 | ATGGATGAAATTTACGGACTGGAATCGAAACCGGAATATTCGGATAAAGCGTTGATGTCGCCGGAGAATATCATATTACCGGTGGATTACCAAGGCTTGCTGGATTCCGGTGACTTCCGCGATAGGATTCCGGTGTTCGGATCCGATGACTTGCTTTCCGCGGCGTCGGCTCTATCGGAAGCTGAAGCTGCTTCCAATTCCCCCAAAATTCGACGGCAAGAAGATGCGAACACTTTGATCAAAGCTAAAATTGCATCTCATCCTTATTATCTTCGTTTGCTAGAGGCTTACATCGATTGCCAGAAGGTGGGGGCGCCGCCGGAGATAGCGACTGTGTTGGAGGACATCCGGCGAGAAAACGACTTTTCAAAGCTAGACTTTGCCTCCACGTGTGGGGAAGTCGATCCATCTCTTGACGAGTTTATGGAAACCTACTGTGAGATGTTGGTGAAGTATAAGTCAGATCTCGAAAGACCTTTCGGTGAAGCAACCTCATTCTTGAACGAGATTGAAGAACAGCTGAGCAATCTCTGCACTGGTCCATCGGTAAGAAGCATCTCCGCCCATTCAATTTTAACCATTCTTTGGTCATACTTGCGATGTCGACGGCTTATTCGGGGGGGGGGGGGGGGTCCAATGTTTCTGTTGTACACGTGTGATCGCTGTGTCTCCCATTTTTCACCCTGGAGTAGCGGTGAGGTTGAATATAACGTGGAACAAATGGAGGTTAAACGATTGAATGTTCTTTTCTCCGATGAAGGATTTTCATCATCAGATGATGAGTTGAGCGTAGGGAATGTAGAGTTCCAGGAAGCTCAAATCAGGGGAGACGGGAAGGACCTGAAAGAAAGGCTTTTCCGCCGGTTCGGCTGCCATATTAGTAACTTAAAACACGAGTTTTCAAAGAAGAAAAAGAAGGGAAAATTACCAAAGGAAGCTAAACAAGTACTTCTTGAATGGTGGAATGTTCACTACAAATGGCCTTATCCGACGGAAGCTGACAAAATTTCTCTGGCGGAGGCGACGGGATTAGATCCGAAACAGATAAACAACTGGTTCATTAATCAGCGGAAGCGGCACTGGAAACCTACGGAGGGTATGCGTTTTGAAGCGATGGAGAAACTTTCGGGGCAAATTCTTTACAGCTAA | 1149 | 46.74 | MDEIYGLESKPEYSDKALMSPENIILPVDYQGLLDSGDFRDRIPVFGSDDLLSAASALSEAEAASNSPKIRRQEDANTLIKAKIASHPYYLRLLEAYIDCQKVGAPPEIATVLEDIRRENDFSKLDFASTCGEVDPSLDEFMETYCEMLVKYKSDLERPFGEATSFLNEIEEQLSNLCTGPSVRSISAHSILTILWSYLRCRRLIRGGGGGPMFLLYTCDRCVSHFSPWSSGEVEYNVEQMEVKRLNVLFSDEGFSSSDDELSVGNVEFQEAQIRGDGKDLKERLFRRFGCHISNLKHEFSKKKKKGKLPKEAKQVLLEWWNVHYKWPYPTEADKISLAEATGLDPKQINNWFINQRKRHWKPTEGMRFEAMEKLSGQILYS | 382 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 19138509 | 19144069 | - | BLOR03793 | Blo11g00917 | 67117 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo11g00917 | 382 | Pfam | KNOX2 domain | 134 | 178 | IPR005541 | GO:0003677|GO:0005634 | |
Blo11g00917 | 382 | ProSiteProfiles | ELK domain profile. | 280 | 300 | IPR005539 | GO:0003677 | |
Blo11g00917 | 382 | SMART | KNOX2_2 | 128 | 179 | IPR005541 | GO:0003677|GO:0005634 | |
Blo11g00917 | 382 | PANTHER | HOMEOBOX PROTEIN TRANSCRIPTION FACTORS | 44 | 379 | - | - | |
Blo11g00917 | 382 | ProSiteProfiles | 'Homeobox' domain profile. | 300 | 363 | IPR001356 | GO:0003677 | |
Blo11g00917 | 382 | PANTHER | HOMEOBOX PROTEIN KNOTTED-1-LIKE 2 | 44 | 379 | - | - | |
Blo11g00917 | 382 | SMART | HOX_1 | 302 | 367 | IPR001356 | GO:0003677 | |
Blo11g00917 | 382 | ProSitePatterns | 'Homeobox' domain signature. | 338 | 361 | IPR017970 | GO:0000981|GO:0006355 | |
Blo11g00917 | 382 | SUPERFAMILY | Homeodomain-like | 301 | 369 | IPR009057 | - | |
Blo11g00917 | 382 | CDD | homeodomain | 312 | 363 | IPR001356 | GO:0003677 | |
Blo11g00917 | 382 | Pfam | Homeobox KN domain | 320 | 359 | IPR008422 | GO:0003677|GO:0006355 | |
Blo11g00917 | 382 | Gene3D | - | 297 | 373 | - | - | |
Blo11g00917 | 382 | Pfam | ELK domain | 280 | 301 | IPR005539 | GO:0003677 | |
Blo11g00917 | 382 | SMART | KNOX1_2 | 78 | 122 | IPR005540 | GO:0003677|GO:0005634 | |
Blo11g00917 | 382 | SMART | ELK_2 | 280 | 301 | IPR005539 | GO:0003677 | |
Blo11g00917 | 382 | Pfam | KNOX1 domain | 80 | 121 | IPR005540 | GO:0003677|GO:0005634 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo11g00917 | Blo-Chr11:19138509 | Blo16g01165 | Blo-Chr16:40199397 | 2.93E-126 | dispersed | |
Blo11g00917 | Blo-Chr11:19138509 | Blo01g01479 | Blo-Chr1:54145214 | 5.26E-69 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
12958 | PF03791 | KNOX2 | 2.00E-22 | No_clan | Blo | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo11g00917 | - | - | csv:101211876 | 390.193 |