Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo11g00921 | AAGATGACAACGCTGAATCATCTTCTTGATCTTCCAGAACAAATTTGTTATGTGCAATGCGGGTTTTGTACCACAATATTGCTGGTGAGTGTTCCTTACAGCAGCTTGTCAATGGTGGTGACAGTTAGATGTGGACACTGCTCTAGCCTCCTCTCTGTCAATATGATGAAAGCCTCTTTCGTCCCATTCCATCTCTTAGCTTCTCTTACCCAAGATTTGCCGAAAGAGGATAGCCAAATGATCGAAAACCAGGCAACTTTGGACGGTAGCGGTGCGTCTATGATGACCCTTTATGACTATGAGGACGAGGACATTGTTCCTACTAATCCCGTCGTGAATAAACCCCCGGAGAAGAGACAGAGAGCTCCGTCCGCTTATAATCGCTTCATCAAGGAGGAGATCAGAAGGCTCAAGGCTGAAAACCCACACATGGCTCACAAAGAAGCCTTCAAAACAGCTGCAAAAAATGTAAGTTTGGTAAAAACACAGTAA | 492 | 44.72 | KMTTLNHLLDLPEQICYVQCGFCTTILLVSVPYSSLSMVVTVRCGHCSSLLSVNMMKASFVPFHLLASLTQDLPKEDSQMIENQATLDGSGASMMTLYDYEDEDIVPTNPVVNKPPEKRQRAPSAYNRFIKEEIRRLKAENPHMAHKEAFKTAAKNVSLVKTQ | 163 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 19326401 | 19327240 | + | BLOR03797 | Blo11g00921 | 67121 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo11g00921 | 163 | Pfam | YABBY protein | 12 | 156 | IPR006780 | GO:0007275 | |
Blo11g00921 | 163 | Gene3D | High mobility group box domain | 112 | 157 | IPR036910 | - | |
Blo11g00921 | 163 | PANTHER | PROTEIN YABBY 6-RELATED | 2 | 157 | IPR006780 | GO:0007275 | |
Blo11g00921 | 163 | PANTHER | AXIAL REGULATOR YABBY 4 | 2 | 157 | - | - | |
Blo11g00921 | 163 | SUPERFAMILY | HMG-box | 111 | 155 | IPR036910 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo11g00921 | Blo-Chr11:19326401 | Blo14g00771 | Blo-Chr14:23660301 | 2.77E-39 | dispersed | |
Blo11g00921 | Blo-Chr11:19326401 | Blo03g00407 | Blo-Chr3:11414194 | 9.03E-41 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
12959 | PF04690 | YABBY | 5.30E-56 | CL0114 | Blo | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo11g00921 | K25796 | - | vvi:100258462 | 231.491 |