Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo11g00921 AAGATGACAACGCTGAATCATCTTCTTGATCTTCCAGAACAAATTTGTTATGTGCAATGCGGGTTTTGTACCACAATATTGCTGGTGAGTGTTCCTTACAGCAGCTTGTCAATGGTGGTGACAGTTAGATGTGGACACTGCTCTAGCCTCCTCTCTGTCAATATGATGAAAGCCTCTTTCGTCCCATTCCATCTCTTAGCTTCTCTTACCCAAGATTTGCCGAAAGAGGATAGCCAAATGATCGAAAACCAGGCAACTTTGGACGGTAGCGGTGCGTCTATGATGACCCTTTATGACTATGAGGACGAGGACATTGTTCCTACTAATCCCGTCGTGAATAAACCCCCGGAGAAGAGACAGAGAGCTCCGTCCGCTTATAATCGCTTCATCAAGGAGGAGATCAGAAGGCTCAAGGCTGAAAACCCACACATGGCTCACAAAGAAGCCTTCAAAACAGCTGCAAAAAATGTAAGTTTGGTAAAAACACAGTAA 492 44.72 KMTTLNHLLDLPEQICYVQCGFCTTILLVSVPYSSLSMVVTVRCGHCSSLLSVNMMKASFVPFHLLASLTQDLPKEDSQMIENQATLDGSGASMMTLYDYEDEDIVPTNPVVNKPPEKRQRAPSAYNRFIKEEIRRLKAENPHMAHKEAFKTAAKNVSLVKTQ 163
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 19326401 19327240 + BLOR03797 Blo11g00921 67121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo11g00921 163 Pfam YABBY protein 12 156 IPR006780 GO:0007275
Blo11g00921 163 Gene3D High mobility group box domain 112 157 IPR036910 -
Blo11g00921 163 PANTHER PROTEIN YABBY 6-RELATED 2 157 IPR006780 GO:0007275
Blo11g00921 163 PANTHER AXIAL REGULATOR YABBY 4 2 157 - -
Blo11g00921 163 SUPERFAMILY HMG-box 111 155 IPR036910 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo11g00921 Blo-Chr11:19326401 Blo14g00771 Blo-Chr14:23660301 2.77E-39 dispersed
Blo11g00921 Blo-Chr11:19326401 Blo03g00407 Blo-Chr3:11414194 9.03E-41 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12959 PF04690 YABBY 5.30E-56 CL0114 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo11g00921 K25796 - vvi:100258462 231.491