Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo11g00923 ATGGATCTTAGAGGCATTGAAGTTCGAGAGACTTCGGAGGCGAACCAATCGGCTGGTCCGATATCTCATTTAGCGTTGGATATTGGAGGCAGTCTTGTTAAGTTGGTGTATTTCTCAAAAAATAAGGAGTTACCCATGGTAGAGTGCTCTTCAAAAAAGAGCTCACGTGTCTCCAATGGTCAAACACATGGTCCTGTTGTTGCAGGGAAACTTCATTTTGCGAAGTTTGAATCAAGCAAGATAGAGGACTGCTTAGAGTTTATCGAGACACAGAAACTTCATCTTAGTGGTTGTCAGCGATTAAAGGCCCTTGACAGTGATAGAATAGTTATTAAGGCCACAGGTGGGGGGGCATATAAGTATGCTGATCGTTTCACAGAAAAGCTTGGAATTTATCTTGATAAAGAAGATGAAATGGATTGTCTTGTAGCTGGAGCAAATTTTCTCCTCAAGGCAGTTCACCAAGAGGCTTTTACCTACATGGATGGTTGGAAGGAATTTGTCCAGCTCGACCAAAATGATATGTACCCCTATCTCCTTGTCAATATTGGGTCTGGTGTTAGCATGATCAAGGTGGATAAAGATGGAAACTTTGAGCGAGTAAGTGGAACAAGTGTTGGTGGTGGCACCTTTTGGGGTTTGGGTAGGCTTCTAACCAAGTGTAATAGTTTTGATGAGTTGCTAGAGTTAAGTCACCGAGGAAATAATCGAGCAATAGACATGCTTGTCGGGGACATCTATGGTGGAATGGATTATGCAAAGTTTGGACTTATGTCAACAACAATTGCTTCCAGTTTTGGCAAGGCGATATCTGATAATAAAAAACTTGAAGATTATAAACCTGAAGATATTTCTAGGTCCCTCTTGAGATTAGTTTCAAATAATATTGGACAGATTGCTTATCTTAATGCTCTTCGATTTGGAATCAAGCGAATTTTTTTTGGAGGATTCTTTATTAGAAGTCATGCTTTTACCATGGATACGATTTCTGTTGCAGTTCATTTCTGGTCAAAAGGTGAAGCAAAAGCAATGTTCTTGAGACATGAAGGTTTTCTTGGCGCATTGGGGGCCTTCTTGAGCTACAAGAAACACGACATGAACGACTCGATCATCCATCAAATTGTGCAGCACTTTCCAAGTGCTTCATTTGCAGATTTTGTGGAACTCCAACTTGGAATTCCCTATATAAATTGGAACTCCTCTGCCTTGAGTTTCCAGTCTCCTCCACCGGTCAACCTCTTTAGTGAAGAACTCTTCTCAGCCAAAGCCCTACCTCGCAACGCCAAACTTCCTCTATGA 1299 41.34 MDLRGIEVRETSEANQSAGPISHLALDIGGSLVKLVYFSKNKELPMVECSSKKSSRVSNGQTHGPVVAGKLHFAKFESSKIEDCLEFIETQKLHLSGCQRLKALDSDRIVIKATGGGAYKYADRFTEKLGIYLDKEDEMDCLVAGANFLLKAVHQEAFTYMDGWKEFVQLDQNDMYPYLLVNIGSGVSMIKVDKDGNFERVSGTSVGGGTFWGLGRLLTKCNSFDELLELSHRGNNRAIDMLVGDIYGGMDYAKFGLMSTTIASSFGKAISDNKKLEDYKPEDISRSLLRLVSNNIGQIAYLNALRFGIKRIFFGGFFIRSHAFTMDTISVAVHFWSKGEAKAMFLRHEGFLGALGAFLSYKKHDMNDSIIHQIVQHFPSASFADFVELQLGIPYINWNSSALSFQSPPPVNLFSEELFSAKALPRNAKLPL 432
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 19380926 19388725 + BLOR03799 Blo11g00923 67123

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo11g00923 432 PANTHER PANTOTHENATE KINASE 3 384 IPR004567 GO:0004594|GO:0005524|GO:0015937
Blo11g00923 432 Pfam Fumble 23 359 IPR004567 GO:0004594|GO:0005524|GO:0015937
Blo11g00923 432 SUPERFAMILY Actin-like ATPase domain 21 155 IPR043129 -
Blo11g00923 432 TIGRFAM panK_eukar: pantothenate kinase 23 360 IPR004567 GO:0004594|GO:0005524|GO:0015937
Blo11g00923 432 Gene3D - 15 168 - -
Blo11g00923 432 PANTHER PANTOTHENATE KINASE 3 384 - -
Blo11g00923 432 SUPERFAMILY Actin-like ATPase domain 128 362 IPR043129 -
Blo11g00923 432 Gene3D - 239 350 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo11g00923 K09680 PANK1_2_3, CAB1, coaW; type II pantothenate kinase [EC:2.7.1.33] - qsu:111996454 562.377
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Blo11g00923 Blo16g01176 CCT
Blo01g00380 Blo11g00923 CCT
Blo06g00844 Blo11g00923 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g00734 Blo-Chr4:6833180 Blo11g00923 Blo-Chr11:19380926 1.09E-178 dispersed
Blo06g00878 Blo-Chr6:32063654 Blo11g00923 Blo-Chr11:19380926 0 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g624 Blo01g00380 Blo16g01176 Bda01g02202 . Bpe13g01489 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Blo06g00844 Blo11g00923 . . . . . Bma06g00596 . . . . . . Car05g00037 . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0008331 3 1 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 35
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo11g00923 Blo_Chr11 FPKM 0.0 0.0 9.177888 9.679324 6.552096 6.455563 5.169512 0.0 0.15266 0.0