Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo11g00948 ATGAATAGAGGTGTTAGAACGATGGGGAACAGAGAAGGGAGGCAGAATCACCATAATCCGGTGCCTCTTGCTTCATTGGTTGGCAAAGAGTTGAGAAGCGAAAGGATGCAGAAGCCGACTGTAAAATATGGCAGTGCAGCCCAGTCTAGGAAAGGGGAGGACTATTTCCTCATTAAAATGGACTGCCTAAGAATCCCTGCAAATTCTTCATCCACCTTTTCGGTGTTCGCTGTATTTGATGGGCACAATGGAAAGGCTGCGGCAATATATTCGAAGGAATATTTGTTGAATCACGTCTTAAGTGCCATTCCTCGTGGTCTTGGTCGGGAAGAGTGGCTTTGTGCTCTACGCCAGGCATTGGTTGATGGGTTCGTGAAAACCGACAAGGAGTTTCGGAGCAGAGGAGATACGTCTGGTACGACAGCAACGTTTGTAATAATTGATGGGTGGACTGTGACAGTGGCATCCGTAGGTGATTCCCGCTGTATTTTAGATACACAAGGTGGCTCTGTCTCCACTTTGACTGTGGACCATAGATTTGAGGAAAACGAAGAAGAGAGGGAGCGTGTGGCCGAAAGTGGAGGCAAAGTCGGAAGGCTTTGCATTGTTGGTGGAGTAGAGGTTGGACCTCTTCGATGTTGGCCAGGCGGTTTATGTCTTTCTCGGTCAATTGGAGATATGGATGTGGGAGAATACATTGTTCCGATTCCATACGTTAAACAAGTGAAGCTATCAAGTGCGGGTGGACGACTTATAATTGCATCCGATGGCATCTGGGATGCCTTATCTTCCGAATTGGCTGCCATGTCCTGCCGTGGGTTGCCAGCTGAGCTCGCTGCTCGACAAGTTGTGAAGGAAGCATTAAGAACGAGAGGCTTAAAAGACGATACGACTTGCTTAGTGGTCGACATAATTCCGCCTGACAATTCACCCCATCCCCCCCCTCCTCCTCCTCCAAAAAAACGGAGCAAGTGGGCAGCTTTATTTTTTGGAAGGAAGTCTCGTGACTCGGCAAACAAACTCTCGAACGATCTTTCTGCAACGAGTATCGTGGAGGAACTGTTTGAAGAAGGCTCCGCCATGCTCGCAGACAGGGTTGGAAATAATGATTGGACGGGACAATCCGCATATGGGTTGTTTGTGTGTGAGGTATGCCGAGTAGACCTTGCAGCAAATGATGGCATCTCAGTGCATGCAGGCTCCATCTTCTCCATGAGTTGGAACCCATGGGAAGGACCGTTTCTTTGCGAGGGCTGTCGAAACGAGAAAGAAGGCATTGAAGCAGGAACAGGAAAAGGAGGTGGTGGAATTAAAGAGTGA 1320 48.56 MNRGVRTMGNREGRQNHHNPVPLASLVGKELRSERMQKPTVKYGSAAQSRKGEDYFLIKMDCLRIPANSSSTFSVFAVFDGHNGKAAAIYSKEYLLNHVLSAIPRGLGREEWLCALRQALVDGFVKTDKEFRSRGDTSGTTATFVIIDGWTVTVASVGDSRCILDTQGGSVSTLTVDHRFEENEEERERVAESGGKVGRLCIVGGVEVGPLRCWPGGLCLSRSIGDMDVGEYIVPIPYVKQVKLSSAGGRLIIASDGIWDALSSELAAMSCRGLPAELAARQVVKEALRTRGLKDDTTCLVVDIIPPDNSPHPPPPPPPKKRSKWAALFFGRKSRDSANKLSNDLSATSIVEELFEEGSAMLADRVGNNDWTGQSAYGLFVCEVCRVDLAANDGISVHAGSIFSMSWNPWEGPFLCEGCRNEKEGIEAGTGKGGGGIKE 439
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 20441760 20444135 - BLOR03824 Blo11g00948 67148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo11g00948 439 ProSiteProfiles PPM-type phosphatase domain profile. 35 304 IPR001932 -
Blo11g00948 439 PANTHER ALPHABET, ISOFORM E-RELATED 11 422 - -
Blo11g00948 439 SMART PP2C_4 34 302 IPR001932 -
Blo11g00948 439 SUPERFAMILY PP2C-like 48 304 IPR036457 -
Blo11g00948 439 CDD PP2Cc 51 304 IPR001932 -
Blo11g00948 439 MobiDBLite consensus disorder prediction 1 21 - -
Blo11g00948 439 Gene3D - 38 307 IPR036457 -
Blo11g00948 439 Pfam Protein phosphatase 2C 68 289 IPR001932 -
Blo11g00948 439 PANTHER PROTEIN PHOSPHATASE 2C 15-RELATED 11 422 - -
Blo11g00948 439 SMART PP2C_SIG_2 58 304 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo11g00948 Blo-Chr11:20441760 Blo17g00668 Blo-Chr17:17077808 0 dispersed
Blo11g00948 Blo-Chr11:20441760 Blo10g00378 Blo-Chr10:6280001 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo11g00948 - - zju:107414241 635.565