Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo11g00965 ATGCAGCAGACCCACCACTCTGTGGTTGTGAGATTGAATGAGCAAACTGGGACAAAAAAAGGGTCCACATTCATTCAGGCTCACAGGGCTTGGCTTCCAAAATTTCTCTTACTTTGGATTATGGTAGTGGTGTTCATCAGTATGTTCATATACAATGGGATGGATGCTGACAACAAAGTTAGAAGGAAGGAAGTTTTATGCAGCATGTGTGATCAAAGGGCAAGAATGCTTCAAGACCAATTCAGTGTTAGCGTTAACCATGTTCATGCATTGGCTATTCTCGTTTCGACCTTTCATTATTTCAAGAATCCATCTGCAATCGATCAGGAAACTTTTGCAGAATACACAGCCAGAACGGCATTTGAGCGACCATTACTGAGTGGGGTGGCATTTGCAGAGAGAGTAATTGATTTTGAGAGGGAAACTTTTGAGAAGCAACATGGATGGACCATAAAAACAATGGAGAGAGAACCTTCACCTAAACGAGATGAGTATGCGCCTGTCATCTTGTCTCAGGAAACTGTGTCTTACATTAAGTCTATTGATATGATGTCAGGAGAGGAGGATCGTGAAAACATATTAAGGGCAAGGGCCACTGGGAAAGCTGTTTTGACCAGTCCCTTCAGGTTGCTAGGTTCTCATCATCTTGGAGTTGTGTTGACATTTCCAGTTTATAAATCCAAACTGCCATCAAATCCCACTGTGGAAGAGCGCATACAAGCAACAGCTGGATATCTTGGCGGAGCCTTTGATGTTGAATCGTTGGTGGAGAATTTGCTTGGGCAACTCGCCGGAAATCAAGCAATTTTGGTGAATGTATATGATATCACTAATGCTTCTGATCTCCTAATCATGTATGGTCATCAATATCAAGATGTTGATGATTCACTTTTGCATGAGAGCAAGCTTGATTTTGGTGATCCCTTTAGGAAGCATCAAATGATATGTAGATATCATCAAAAGGCACCCACATCATGGACAGCACTTACTACAGCGTTTTTATTCTTTGTGATTGGATTATTGGTGGGCTATATATTATATGGGGCAGCAACCCACATTGTTAAAGTAGAAGATGACTTTCATGGAATGCAGGAATTAAAAGTTCTTGCTGAAGCTGCTGATGTTGCCAAGTCTCAGTTTCTTGCAACCGTGTCCCATGAAATTAGGACACCCATGAATGGCATCCTTGGAATGCTTGCTCTACTTCTTGATACTGATTTAAGCTCAACACAAAGAGACTATGGTCAAACGGCCCAAGCCTGTGGAAAGGCACTCATCGCATTGATAAATGAGGTGCTTGATCGGGCAAAAATTGAAGCTGGGAAGTTAGAGCTTGAAGCCGTTCCCTTTGATCTTAGATCAGTACTAGATGATGTCCTCTCTTTATTTTCTGAAAAATCTAGGCACAAGGGTATTGAGCTGGCTCTATTTGTTTCTGATAAAGTTCCAGAATTTGTCGTTGGTGATCCTGGAAGATTTAGACAAATCATCACAAATCTTGTCGGTAACTCCGTTAAATTTACAGAACAAGGACATATATTTGTTAAAGTTCACCTGGTAGAACACTCCAGGCCCACATCTAATGGAAAATCTGAAATTTATTCGAATGGAAGATCAGATGAAAGCGTATTAATCCATAGTAGCTGCCAGTTTAAAACATTAAGTGGATTTGAGGCAGCAGACGATCAAAACAGTTGGGAAAAATTCAAGCATCTTGTTTTGGAAGAAGAGTATAAATCTGACACATTAAGCATCGGAACAGCTATGAAGGAAAATAACAATTCTGAGCATGTCACGTTAATGATATGCGTCGAGGATACAGGGATCGGAATCCCATTATGTGCCCAAAATCGAGTTTTCATGCCTTTTGTGCAAGCAGACAGCTCAACTTCGAGACACTATGGAGGAACTGGTATTGGCTTAAGCATCAGTAAATGCTTAGTTGAATTAATGGGTGGTGGTATAAGCTTCATTAGCAGACCTCCGATTGGAAGCACATTTTCTTTCACTGCTGTTTTTGGGAAATGGCAGAAAAATTCAGTGAATGAATTGAAAAAGACCAATTCTGAAGAACTTCCTTCCGGCTTTAGAGGATTGAAGGCCATTGTCGTAGATGGGAAGCCGGTTAGAGCATCTGTGACGAAATACCATTTGAAGAGACTCGGCATTTGTGTTGAGGTTGTGAGTAGCATCAAAATGGCAGCTTCATTTCATGGCAAAAATGGTTCTACTATCGCTTCAGGTGTTTTCAAAAACCATCTTGAGTTTCTGTTGAAAGACAACAGAGTTTTATGTATTCCAGGAACAGGTTTTGAAAACACCTGCCACCCTTTACTCCTTAATTGTTTTCCTTTTCTCTGCGGGAACATGTTCGAGCCAGATGTGATTCTGGTCGAGAAAGATTCTTGGGTTGTTGAAGATGATTTTAATTTCAATCTGCACCAGCCAGATCGTAAACCAAACGGTTGCATATTCAAATTACCAAAAATGATTCTTCTGGCAACAAATATCAGCATAGGAGAATTTGATCGAGCCAAGGATTCAGGCTTTGCAGACACTGTTATAATGAAGCCATTGAGGGCAAGCATGGTTGCAGCATGTCTTCAACAAGTACTAGGAATCGGCAAAAAGAGGCAACAAGGGAAGGACTTCCCGGATGACTCGAAAAAGTCTATTAAAAGCCTGCTTTGTGAGAAGAAAATATTGGTGGTTGACGATAATAGGGTCAACCGGAGAGTTGCAGCCGGTGCTCTGAAGAAGTTTGGTGCCAACGTTGAATGTGCGGAGAGTGGTAAAGCTGCCATGGAGTTGCTTAAACCTCCTCACAGCTTTGATGCTTGCTTCATGGATATTCAAATGCCGGAAATGGATGGATTTGAGGCCACGTGCCGGATTCGGCAGATGGAGAGCAAGGCAAACGAGCAAATGAAGGGAGAATTTTCAGGCAAAGGAAACGGCGGCAAAGACAAGTGGCATGTACCGATATTAGCAATGACAGCTGACGTAATACACGCAACTTATGAAGAATGCTTAAAATGTGGAATGGATGGCTATGTTTCTAAGCCTTTTGAGGAAGAAAATCTCTATCAAGCTGTCTCAAAGTTCTTCAACTCATAG 3117 41.48 MQQTHHSVVVRLNEQTGTKKGSTFIQAHRAWLPKFLLLWIMVVVFISMFIYNGMDADNKVRRKEVLCSMCDQRARMLQDQFSVSVNHVHALAILVSTFHYFKNPSAIDQETFAEYTARTAFERPLLSGVAFAERVIDFERETFEKQHGWTIKTMEREPSPKRDEYAPVILSQETVSYIKSIDMMSGEEDRENILRARATGKAVLTSPFRLLGSHHLGVVLTFPVYKSKLPSNPTVEERIQATAGYLGGAFDVESLVENLLGQLAGNQAILVNVYDITNASDLLIMYGHQYQDVDDSLLHESKLDFGDPFRKHQMICRYHQKAPTSWTALTTAFLFFVIGLLVGYILYGAATHIVKVEDDFHGMQELKVLAEAADVAKSQFLATVSHEIRTPMNGILGMLALLLDTDLSSTQRDYGQTAQACGKALIALINEVLDRAKIEAGKLELEAVPFDLRSVLDDVLSLFSEKSRHKGIELALFVSDKVPEFVVGDPGRFRQIITNLVGNSVKFTEQGHIFVKVHLVEHSRPTSNGKSEIYSNGRSDESVLIHSSCQFKTLSGFEAADDQNSWEKFKHLVLEEEYKSDTLSIGTAMKENNNSEHVTLMICVEDTGIGIPLCAQNRVFMPFVQADSSTSRHYGGTGIGLSISKCLVELMGGGISFISRPPIGSTFSFTAVFGKWQKNSVNELKKTNSEELPSGFRGLKAIVVDGKPVRASVTKYHLKRLGICVEVVSSIKMAASFHGKNGSTIASGVFKNHLEFLLKDNRVLCIPGTGFENTCHPLLLNCFPFLCGNMFEPDVILVEKDSWVVEDDFNFNLHQPDRKPNGCIFKLPKMILLATNISIGEFDRAKDSGFADTVIMKPLRASMVAACLQQVLGIGKKRQQGKDFPDDSKKSIKSLLCEKKILVVDDNRVNRRVAAGALKKFGANVECAESGKAAMELLKPPHSFDACFMDIQMPEMDGFEATCRIRQMESKANEQMKGEFSGKGNGGKDKWHVPILAMTADVIHATYEECLKCGMDGYVSKPFEEENLYQAVSKFFNS 1038
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 21758860 21764616 + BLOR03841 Blo11g00965 67165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo11g00965 1038 CDD REC_hyHK_CKI1_RcsC-like 901 1032 - -
Blo11g00965 1038 Gene3D - 894 1038 - -
Blo11g00965 1038 Pfam His Kinase A (phospho-acceptor) domain 376 441 IPR003661 GO:0000155|GO:0007165
Blo11g00965 1038 Coils Coil 426 446 - -
Blo11g00965 1038 SUPERFAMILY CheY-like 899 1037 IPR011006 -
Blo11g00965 1038 SMART HisKA_10 376 441 IPR003661 GO:0000155|GO:0007165
Blo11g00965 1038 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 370 442 IPR036097 GO:0000155|GO:0007165
Blo11g00965 1038 PANTHER HISTIDINE KINASE 4 18 760 - -
Blo11g00965 1038 PANTHER TWO-COMPONENT HISTIDINE KINASE 787 1038 - -
Blo11g00965 1038 PANTHER TWO-COMPONENT HISTIDINE KINASE 18 760 - -
Blo11g00965 1038 ProSiteProfiles Response regulatory domain profile. 900 1036 IPR001789 GO:0000160
Blo11g00965 1038 SMART REC_2 899 1032 IPR001789 GO:0000160
Blo11g00965 1038 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 430 670 IPR036890 -
Blo11g00965 1038 SMART HKATPase_4 488 675 IPR003594 -
Blo11g00965 1038 CDD HisKA 376 437 IPR003661 GO:0000155|GO:0007165
Blo11g00965 1038 Pfam Response regulator receiver domain 901 970 IPR001789 GO:0000160
Blo11g00965 1038 Gene3D - 54 106 - -
Blo11g00965 1038 Gene3D - 350 439 - -
Blo11g00965 1038 PRINTS Bacterial sensor protein C-terminal signature 618 628 IPR004358 GO:0016310|GO:0016772
Blo11g00965 1038 PRINTS Bacterial sensor protein C-terminal signature 659 672 IPR004358 GO:0016310|GO:0016772
Blo11g00965 1038 PRINTS Bacterial sensor protein C-terminal signature 600 614 IPR004358 GO:0016310|GO:0016772
Blo11g00965 1038 PRINTS Bacterial sensor protein C-terminal signature 635 653 IPR004358 GO:0016310|GO:0016772
Blo11g00965 1038 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 488 672 IPR003594 -
Blo11g00965 1038 Gene3D - 440 675 IPR036890 -
Blo11g00965 1038 Pfam CHASE domain 106 286 IPR006189 -
Blo11g00965 1038 Gene3D CHASE domain 107 322 IPR042240 -
Blo11g00965 1038 PANTHER HISTIDINE KINASE 4 787 1038 - -
Blo11g00965 1038 CDD HATPase_EvgS-ArcB-TorS-like 493 673 - -
Blo11g00965 1038 SMART CHASE_2 103 288 IPR006189 -
Blo11g00965 1038 ProSiteProfiles CHASE domain profile. 103 315 IPR006189 -
Blo11g00965 1038 ProSiteProfiles Histidine kinase domain profile. 383 675 IPR005467 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00163 Blo-Chr1:2193629 Blo11g00965 Blo-Chr11:21758860 0 dispersed
Blo02g00136 Blo-Chr2:1157458 Blo11g00965 Blo-Chr11:21758860 0 dispersed
Blo07g00250 Blo-Chr7:3078235 Blo11g00965 Blo-Chr11:21758860 1.29E-11 dispersed
Blo11g00965 Blo-Chr11:21758860 Blo14g00504 Blo-Chr14:6824587 7.91E-54 dispersed
Blo11g00965 Blo-Chr11:21758860 Blo12g00277 Blo-Chr12:16640388 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12960 PF02518 HATPase_c 2.50E-29 CL0025 Blo TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo11g00965 K14489 - vvi:100254304 1527.3