Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo11g00966 ATGAAGAGCAGAACGACTCGGGTGAAGCCAAAGGAGGAACCGCTGTTTTTCATCAAGAAGAAGCTCCGATCCAAGCTTAATCGCCGTCGACGAACTCAGATTTCTCCCATTTTTTCCTTCTTGAATTGCAATGCTCCTTCCCAGAATTATCGTTTCTTTAGTTTTTCTGACGATTCGAGCATGGCATCCTATGTCGGAGGCGAAGTTTCTGGAGTTTCCAGCAGCGTTTCTGGTGGATTGGCGTCCAAGGTGAATTCGAATTTGAGGAAGAGGAAGTTTGGAGACGGTCAAGTTTCCAAAAACGTAGTTCTAGTGGATAATAAAGTTGTCAATGCTCCGTTTCGTAGAATTACAAGATCTTATTATAAGAAGAGCGAATGTCCGGGAAATGAAGATTGGAAAGAGGCTGGAGGTAGTGAAGCTGAACCATCCGAAATGTCATGCGTGGAGTCCAATTGTGGTGCTAATTTTGATTGTTTTGATAAGAGAAGCTCGAAAGTAAAAATTAAGATTGAAGTTATGAAAAGAAGTGGAGGAAACAAAGGCTCTCACGCCGTTCCCGGTTCGGAGATTTCCAGTGTCGAACAACTTCCAAAAGAAGCATCCGACCAAATTTTGAAAATCAGTGCTGGAGATGTGAAATTCTCATCAAATAATTGTGAAGATGATACTGTTTCGCTCATTTCTGGTTTAGCATCGTGCTCTGAAACAAACTTTGCTTGCTCCGATGCATATGCAAAGCTTGAACTACCTAACTTTCATAGAAATTACAAAAATGCAAATTGCGATGTCTTCACGTCAGTTTCGGCTATCGGTGAACCCAATCTTGCATGCCAGGAACAATTCTCTTATGAAGAACTCTATGAGAACTCATCTAGTCAGGTACTTTCCGAGCTTCAATCAGAAAATTTCCTCGACAATTCAGACCTAGAATTCTTAGACTACACTCCGTCAATTTTCTTTGATTCCGGAAGCGAATTCTCGGAAAGATCCATTGGAGATTTAACCCCTTCACCAACTTTCTCCCTGTTGCTCCGATTCAAAGAGGAGTTTCAAAGATCAACTAATTCTCAGGATAATAGCAAAATCTCGCGCATGGAAGAAGATTACAAATTTTTGCGGTTCGAAAATGAAGAAGACGAGGAGAGCTATCAAATGTTGAGAGACAGAGAAAGACGGCAAGTCCTTTTGCGTGACTGCCCAGAGTACTTCCCCACTGCGGAGGACAGCGATCTCATCCTCCAGCAACGGTCACAGATGATCCATTGGATCGTTGAGCTATTCACTGATATGAAGCTTCATCATGAGACCGTATTCCTGGGAGTAAGCCTCTTTGACCGGTTCCTCAGCAAAGGATTCTTCAATAACAAAAGGAATCTTCAAATTCTTGGCATAGCATGTCTAACATTGGCAACTAGGATTGAGGAAAATCAGCCTTACAACAACGTGAGGAGAAAGAATTTCAACGTGGGAGGGAATGTTTATAATAGATGTGAAGTTGTTGCCATGGAATGGATGGTTGAAGAAGTCCTCGATTTCAATTGTTTCCTGCCAACTGTTTACAACTTTTTATGGTTCTATTTGAAAACTGCTGAAGGTGATGCACATTTAGAGAAGAGGACTCGGTCTCTAGCTGTTTTAGTACTATCAGATGATGTGCATATCCGACATAGGTCCTCAACAATTGCTGCCGCGCTTGTCATACTGGCATCTCTGGAGAGCAACCAGGATTCCACCCGTCAACGAGTCATAGAGGTAGAATGTTGGACAACTAATAATGCATAG 1785 42.18 MKSRTTRVKPKEEPLFFIKKKLRSKLNRRRRTQISPIFSFLNCNAPSQNYRFFSFSDDSSMASYVGGEVSGVSSSVSGGLASKVNSNLRKRKFGDGQVSKNVVLVDNKVVNAPFRRITRSYYKKSECPGNEDWKEAGGSEAEPSEMSCVESNCGANFDCFDKRSSKVKIKIEVMKRSGGNKGSHAVPGSEISSVEQLPKEASDQILKISAGDVKFSSNNCEDDTVSLISGLASCSETNFACSDAYAKLELPNFHRNYKNANCDVFTSVSAIGEPNLACQEQFSYEELYENSSSQVLSELQSENFLDNSDLEFLDYTPSIFFDSGSEFSERSIGDLTPSPTFSLLLRFKEEFQRSTNSQDNSKISRMEEDYKFLRFENEEDEESYQMLRDRERRQVLLRDCPEYFPTAEDSDLILQQRSQMIHWIVELFTDMKLHHETVFLGVSLFDRFLSKGFFNNKRNLQILGIACLTLATRIEENQPYNNVRRKNFNVGGNVYNRCEVVAMEWMVEEVLDFNCFLPTVYNFLWFYLKTAEGDAHLEKRTRSLAVLVLSDDVHIRHRSSTIAAALVILASLESNQDSTRQRVIEVECWTTNNA 594
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 21844441 21847798 + BLOR03842 Blo11g00966 67166

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo11g00966 594 SUPERFAMILY Cyclin-like 377 514 IPR036915 -
Blo11g00966 594 Coils Coil 363 383 - -
Blo11g00966 594 SUPERFAMILY Cyclin-like 495 576 IPR036915 -
Blo11g00966 594 ProSitePatterns Cyclins signature. 417 448 IPR006671 -
Blo11g00966 594 Pfam Cyclin, C-terminal domain 518 578 IPR004367 -
Blo11g00966 594 PANTHER CYCLIN-SDS 1 591 - -
Blo11g00966 594 SMART cyclin_7 422 509 IPR013763 -
Blo11g00966 594 Gene3D - 512 592 - -
Blo11g00966 594 Pfam Cyclin, N-terminal domain 384 514 IPR006671 -
Blo11g00966 594 Gene3D - 406 511 - -
Blo11g00966 594 CDD CYCLIN 417 479 IPR013763 -
Blo11g00966 594 PANTHER CYCLINS 1 591 IPR039361 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo11g00966 K21777 CCNB; G2/mitotic-specific cyclin-B, other - qsu:112029982 475.707
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo11g00966 Blo-Chr11:21844441 Blo12g01089 Blo-Chr12:28551756 1.16E-15 dispersed
Blo11g00966 Blo-Chr11:21844441 Blo04g00460 Blo-Chr4:3826943 1.16E-16 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g524 . . . . . . Bma14g01920 . . . . Cma04g00085 . Car04g00086 . . . . . . . . . . . . . . . . . . . Cone6ag0348 Cone9ag0381 . . Chy10g00215 . . Blo11g00966 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Csa05g01127 . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0008679 0 1 1 1 1 1 2 1 1 1 1 1 2 0 1 2 1 2 2 1 1 1 1 1 1 1 1 2 2 1 35
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo11g00966 Blo_Chr11 FPKM 23.12285 24.186266 21.212742 20.318262 10.853283 9.949639 9.1578 31.064606 28.010599 29.391148