Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo11g00974 ATGTGTGAGGACTGCTTCTGTTCTTCATGGTCGGATAATAATAAATTTTCCGACAATTTTGATACCTATCCTTGGTTAAATCAAAGAAGGAATGTCGAAATATGCGAGAAGGAGAAATCAAGGTGTTACTGTAAAAGAGATACGGATCGTGAGAGTGTAGAAATTAAGGATCAAGAGAATGAGGAAGAAGACAAAGTTCTTGAGAAGTTGCTTCCACTAAACCGAAAGGAATCCACTGCAGAAGAATCATTTGATGGAAGTGTCATAAGCGACATCGACAGTTATGAGGGAATTGTGTCGATTGAGAAGTTGAAATCTGCATTGAGAGCCGATCGAATGGCCTTAAATGCTTTGTATGCAGAATTAGAGGAAGAGAGAAGTGCTTCTGCAGTAGCTGCCAATCAAACAATGGCAATGATTAATAGGCTTCAAGAAGAAAAGGCCAGTATGCAAATGGAGGCTTTACAGTACCAAAGAATGATGGAAGAACAATCTGAGTACGATCAAGAAGCGTTGCAGATATTGAACGAGTTTGTCATTAAAAGGGAAAGAGAGAAGCAAGAACTTGAAAAAGAACTCGAAATTTATCGAAGAAAGGTTCATGATTTCGAGGCAAGAGAGAAAATGATGATTTTAAGATGCAAAAAGGAAGAAATTGGCAAGAGTTCTTCGGGTTTTTCGAGTAATGGGGAGGAAAGTGATGAAGTATTGACAGAAATGAACAATGAAGAAAAAGATGAAGATAGAATTTATGAAAATGGAGTAAGTAAAACACAAAACACTCCGGTCGATGCAGTTTTATACTTGGAAGAATCAATTGCTAGCTTCGAAGAAGAAAGAATCTCCATAATTGAGCAGCTGAAGCTTTTGGAAGAGAAGCTTTTCTTCTTGCGTGATGAAGAAGAAAATGGAAATGGCTTCTACGAAAATACGGATTCTAGTGGAAGATCAAATTGTTATGAAAATGGGTATCATCACAGAGAAATCAATGGAGGAAACAATCATCAAGACAGACGAATCATGAATCCTAAACCAAAGAGGCTGCTTCCTCTTTTTGACAAAACAGTGGAAGAAGACTCAGAAGAAGAAGAGCAGGAATTGGACAAAAATGGAGAAGGCTTTGAATCATTCTCCATGAACATGACAATAAATTCAAACAATGAATCAGAAGAGTACAAGAAGATAGCCATTGAAGAAGAGGTCGACCATGTCTATGAAAGACTTCAAGCTCTTGAAGAAGATAGAGAGTTTCTTAAACATTGCATAAGCTCTTTAAAAAAAGGAGACAAGGGTTTGGAGCTTCTTCAAGAGATTTTGCAGCATCTTCGGGATCTAAGAAGCGTTGATCTTCGAGCTAAAGGACTCAATGCCATATCATAA 1380 37.68 MCEDCFCSSWSDNNKFSDNFDTYPWLNQRRNVEICEKEKSRCYCKRDTDRESVEIKDQENEEEDKVLEKLLPLNRKESTAEESFDGSVISDIDSYEGIVSIEKLKSALRADRMALNALYAELEEERSASAVAANQTMAMINRLQEEKASMQMEALQYQRMMEEQSEYDQEALQILNEFVIKREREKQELEKELEIYRRKVHDFEAREKMMILRCKKEEIGKSSSGFSSNGEESDEVLTEMNNEEKDEDRIYENGVSKTQNTPVDAVLYLEESIASFEEERISIIEQLKLLEEKLFFLRDEEENGNGFYENTDSSGRSNCYENGYHHREINGGNNHQDRRIMNPKPKRLLPLFDKTVEEDSEEEEQELDKNGEGFESFSMNMTINSNNESEEYKKIAIEEEVDHVYERLQALEEDREFLKHCISSLKKGDKGLELLQEILQHLRDLRSVDLRAKGLNAIS 459
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 23032594 23034953 - BLOR03850 Blo11g00974 67174

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo11g00974 459 PANTHER MYOSIN-BINDING PROTEIN 2 48 453 IPR039306 GO:0017022
Blo11g00974 459 ProSiteProfiles GTD-binding domain profile. 99 197 IPR007656 -
Blo11g00974 459 Coils Coil 133 160 - -
Blo11g00974 459 Coils Coil 172 206 - -
Blo11g00974 459 PANTHER MYOSIN-BINDING PROTEIN 2 48 453 - -
Blo11g00974 459 Pfam Zein-binding 103 193 IPR007656 -
Blo11g00974 459 Coils Coil 273 293 - -
Blo11g00974 459 Coils Coil 394 414 - -
Blo11g00974 459 MobiDBLite consensus disorder prediction 221 235 - -
Blo11g00974 459 MobiDBLite consensus disorder prediction 220 247 - -
Blo11g00974 459 MobiDBLite consensus disorder prediction 356 377 - -
Blo11g00974 459 Coils Coil 105 125 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo11g00974 - - - cmax:111486936 434.876
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo11g00389 Blo-Chr11:3328634 Blo11g00974 Blo-Chr11:23032594 2.72E-82 dispersed
Blo11g00974 Blo-Chr11:23032594 Blo10g00318 Blo-Chr10:4793547 1.67E-40 dispersed
Blo11g00974 Blo-Chr11:23032594 Blo07g01293 Blo-Chr7:33158507 7.06E-15 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g461 . . . . . . . . . . . . . . . . Cpe01g01841 . . . . . . . . . . . . . . . . Cone6ag0387 Cone9ag0414 . Csa05g02013 . . . Blo11g00974 . . . . . . . . Cmo15g01004 . Cma15g00963 . Car15g00909 Cpe13g00361 . Bhi12g00920 . . . . . . Cla01g00620 Cam01g0648 Cec01g0640 Cco01g0666 Clacu01g0636 Cmu01g0609 Cre09g1892 Lsi09g00670 . Chy09g00840 Cme09g01372
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0006446 1 3 1 0 1 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 2 1 1 1 1 2 1 1 38
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo11g00974 Blo_Chr11 FPKM 0.674892 1.497032 0.144724 0.191188 1.750367 2.438865 1.406359 0.097376 0.130149 0.223831