Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo11g00975 ATGGTTCCAACTTCGCCGAGGATTTCATGGTTTGCCGTCAACTCGCCGAAGCATCGGTTGAGGGAAGCCTCCCAGGAAGAATGCATAGCTCAAAAATGCAAGAGATTGAAGACCCGTGTGGTGAAGAAAAACTGCAATCCCGTTTGGAATGACGAGATCACTCTTTCCATTTCAAATCTTAACGCTCCAATAACCCTAGCAGTATTTGACAAAGACAGGTTCACGGGAGATGACAAAATGGGCGATGCAGAGATTGACATTAAACCCTACATAGAGTGTCTTTCAATGGGGTTGAAGGATCTGCCCAAGGGTTGTGTCGTGAAAAGACTTCAGCCAGACCAGACAAACTGTCTCTCCGACGAGAGCACGTTTATTTGGGACGACGGAAAAATCATTCAAGAAATGCCGCTCAGGTTGAAGAATGTTGAGTGTGGAGAAGTTATAATTCAAATCGAATTGATCGTTGGCCCTGGTTCTGGACGGGAATTTGTGTTGGGCATTGAGATTCGTCAGCGAGTGTTGGATTTAGAGGTTTTGGATTCTCCAGCGTTCTTCGACGAGTAA 564 45.74 MVPTSPRISWFAVNSPKHRLREASQEECIAQKCKRLKTRVVKKNCNPVWNDEITLSISNLNAPITLAVFDKDRFTGDDKMGDAEIDIKPYIECLSMGLKDLPKGCVVKRLQPDQTNCLSDESTFIWDDGKIIQEMPLRLKNVECGEVIIQIELIVGPGSGREFVLGIEIRQRVLDLEVLDSPAFFDE 187
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 23205757 23211263 - BLOR03851 Blo11g00975 67175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo11g00975 187 Gene3D C2 domain 19 162 IPR035892 -
Blo11g00975 187 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Blo11g00975 187 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 29 158 IPR044562 -
Blo11g00975 187 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 31 94 IPR035892 -
Blo11g00975 187 SMART C2_3c 9 110 IPR000008 -
Blo11g00975 187 Pfam C2 domain 31 89 IPR000008 -
Blo11g00975 187 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 10 29 158 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo11g00975 Blo-Chr11:23205757 Blo18g00463 Blo-Chr18:5261428 9.31E-44 dispersed
Blo11g00975 Blo-Chr11:23205757 Blo06g01009 Blo-Chr6:33326549 1.72E-70 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo11g00975 - - zju:107429323 192.971