Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo11g00999 ATGGATAGAATTTCATTTTCTCTTTCCCAGATATTTCATCAACAAGAATTTATGGATTTTTCATTTTCTGCAAAAGTCAATCATGTTGAAAGATGCACGACTCAGTTAATTGAGCAGTATAACAAAATGCTTTCTGAAATTGATCTCCTTCGACAGTATTTATCTGGGAATAGGACGGGGCTTGGGTTGCAGGATTTAGAGGCAATATTTTCTGCTGCTCGTGATGAGCTATTTTACCTCAAAGGCAAGGAAGAAGGCTTTGTAGAGAAATTAAGATGTCTAGAAAATGACAACAGGATATTGATAGAACAGCTGGAAAATCACAGAGTACTAGTTGAGACAATGAAGACTGATATTGCAAAAACAAAGATGGAAGTTGAGCAAGAAAGGAATAAATTCGGTAGTACTAAAGAAAAGCTTAGTATGGCTGTGACAAAAGGCAAGGCATTAGTGCAACAGCGAGATGCATTGAAGCAATCATTGGCGGACAAAACACTTAAGCTTGAGAAATGTTTGATTGAATTACAAGAGAAATCAACTGCTCTGGAGGCTGCTGAATTGAGCAAAAGAGAGTTGATAAAAAATGAAACCTTAATTGCATCACTGCAGGAGAACGTCTTCCAAAAAACTGAAGTTCTTGAAAAATTTGAAGGATTTTTGTCTCAAATTGATGCTCCCTCAGATATTGAGTCGATCGATATGGTAGAGAGACTTAGATTGCTTGTGGTTGAGAACAAAAGGCTCAAGGAAATTTCTTTAGAATTACACAAGGTTGAAGATGTTTTTTGTTTGGTTGATCTACCTGAAGTTTTTTCATCTTCTGATTTGAAATCTCGTGTTAGTTGGCTTAAGGAATCTTTTTTCCAGGCCAAAGATAAAATAATTATGTTGCAAGATGAACTTGCTAGAACAAGGGAAGCAGGACATAAGGATATCGACCAATTGACTGAATCACTTTTAATGGAATTACAAGTCAAGAACTTTCTCAAGGTGGAGCTGGATGATCTAACCCTTGAGTACAAAGAGATTGGTGAAAAAGTGTGTCAGATTTCAATGGAGAAGGATTGGATTGTCAAGATGTTGCTTGAAGTTTCTGGAGTTTTAGCAGAAGATAATAAGGTTTCCGAGCCTTCCTTTGATGTTTCTGTTCTTGTTGACAGAAGCCTTCAGAAGATAAAAGAGCAGATAAGTGCCCCTGTAGAATACTCTGGTTTTGATGTGGAGTCATTTGAAAGAATTCAAACCCTCTTATATGTGAGGAATCAGGACTTGATGCTATACAGTAATATTTTGGAGGAGGAGTTACTTGACTTGGATAATTGTTCGAGTAAGTTAAGTGCGATGTCTCAGGAGCTCATGATAATGAGTGAAGATAAAGAAGTTTTACTGAAAGATCTAGAAAGATCGGAGGAAAAATCTGCTGTCCTGAGGGAGAAGTTGTCCATGGCAGTCAAGAAAGGCAAGGGACTGGTTCAAGATCGGGAAAATATGAAACGAATTTTGGAGGAGAAAAGCTCAGAAATCGAGAAGTTGAAGCATGAATTGGAGAGTCAAGAATCCATTGTTTCCAATGCCATGAACCAGATCAATAAGTTGTCAGTTGATGCCGAGTGTATCCCCAAGTTGGAGGCTGATCTTGTTGCCATGAAAGATGACCGAAGTCAATTTGAGCAGCTGTTATGGGAGAGCAATAATATGTTGCAGAAAGTCATCAAATCTCTTGATGATATTTTCGTTCCTGTTGATATAGTTTTTGAAGGGCCAATAGGAAAGGTGAAGTGGCTTGCAGGATACCTTAAGGAATGTCTTGAAGCCAGGAGTCATGCAGAGCAAGAGTTAGCGAAAGTTAAGGATTACGCAGAAGATCTCACTTATAAATTAGACGAAGCCTTGGATTCAGTGATATCATTGAAAGATGCTTTATCAGCTGCAGAGAGCAATATTTCTCAAATTTCCGAGGAAAAGAGGGAAGTTGAAACTCAAAAATTACAAGTTGAAAAAAAGTTGCAGAAAGGAATAGATGACGCAAATTTATTGTCTGAAAAATTTAATGAAGCTTGCTCTGCTAGATATGTACTTGAAGAGGTATTGTCAGCAGTAGAAAATAAATTAACCCTTCTTATCAACGAGAAAGAAGAGGTTCAAGTCAGTAGACTCACTGCAGAAATGGAGCTTGGGAAAGCGAAGGAGGAGGTAGATGCTCAAACCAGTAAACTTGAAGAGGCTCATAAAACCATTAAGTTTCAAGAAGATGAACTCTCTCAGTTGAAGAAAAATATTGCTATACTCACTGAACAACACAATGATGCACAATCTGGTAGAACCCATTTAGAGATTGAGTTGAAGAAACTTCAGGAAGAAGCTGGATCCCAGGTCAGTCAGCTTGACGAAGCCTCTGCAACAATAAAAACATTGGAAGATTCACTAGAAAAGGCCAAGAGTAATATTTCAGTGCTAGAAGATTCTAGGGAAAAGGCTGAAGAGGAAATATTCACACTGACTTCCAAATTAAATGCATGCATGGAGGAGTTAGCTGGTACTAATGGCAGCATTAAAAGCTGGTCCATAGAGTTATTTGGGTGCCTCAATGATCTTCAGGAGCTTATGAGAGATAGCATGCTAATGTCTAGTGTGACACGATGTTTTGAAAAAAAACTCAAAAGCCTAAAAGAGATGGAACTTATTCTTAAAGATATAAGAAAGAGTTGTGCAGACAGTGGTTTGCAAGATCTGCAAAGACGCTGCAGCATGGAGGTAAAATGCTACATCTGTCATGTTTTCAAGTCTCTGAACACGTCGGGTCTCATTCCAACACAAGGAAAACTTATTGCAGACCGAATTGATGGAATATGGGTATCGGGTGGTCGGGTTCTGATGAGTCGGCCAAGGGCGAGGCTCGGCCTTCTTGCTTATTGGATTGTCTTGCATATGTGGCTGCTGGCATCCGTTTTCTAA 2955 38.71 MDRISFSLSQIFHQQEFMDFSFSAKVNHVERCTTQLIEQYNKMLSEIDLLRQYLSGNRTGLGLQDLEAIFSAARDELFYLKGKEEGFVEKLRCLENDNRILIEQLENHRVLVETMKTDIAKTKMEVEQERNKFGSTKEKLSMAVTKGKALVQQRDALKQSLADKTLKLEKCLIELQEKSTALEAAELSKRELIKNETLIASLQENVFQKTEVLEKFEGFLSQIDAPSDIESIDMVERLRLLVVENKRLKEISLELHKVEDVFCLVDLPEVFSSSDLKSRVSWLKESFFQAKDKIIMLQDELARTREAGHKDIDQLTESLLMELQVKNFLKVELDDLTLEYKEIGEKVCQISMEKDWIVKMLLEVSGVLAEDNKVSEPSFDVSVLVDRSLQKIKEQISAPVEYSGFDVESFERIQTLLYVRNQDLMLYSNILEEELLDLDNCSSKLSAMSQELMIMSEDKEVLLKDLERSEEKSAVLREKLSMAVKKGKGLVQDRENMKRILEEKSSEIEKLKHELESQESIVSNAMNQINKLSVDAECIPKLEADLVAMKDDRSQFEQLLWESNNMLQKVIKSLDDIFVPVDIVFEGPIGKVKWLAGYLKECLEARSHAEQELAKVKDYAEDLTYKLDEALDSVISLKDALSAAESNISQISEEKREVETQKLQVEKKLQKGIDDANLLSEKFNEACSARYVLEEVLSAVENKLTLLINEKEEVQVSRLTAEMELGKAKEEVDAQTSKLEEAHKTIKFQEDELSQLKKNIAILTEQHNDAQSGRTHLEIELKKLQEEAGSQVSQLDEASATIKTLEDSLEKAKSNISVLEDSREKAEEEIFTLTSKLNACMEELAGTNGSIKSWSIELFGCLNDLQELMRDSMLMSSVTRCFEKKLKSLKEMELILKDIRKSCADSGLQDLQRRCSMEVKCYICHVFKSLNTSGLIPTQGKLIADRIDGIWVSGGRVLMSRPRARLGLLAYWIVLHMWLLASVF 984
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 25067658 25073523 - BLOR03875 Blo11g00999 67199

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo11g00999 984 Coils Coil 627 671 - -
Blo11g00999 984 Coils Coil 494 528 - -
Blo11g00999 984 Coils Coil 91 132 - -
Blo11g00999 984 SUPERFAMILY Tropomyosin 668 857 - -
Blo11g00999 984 PANTHER BNAA09G28150D PROTEIN 924 983 - -
Blo11g00999 984 Coils Coil 175 195 - -
Blo11g00999 984 PANTHER - 1 662 - -
Blo11g00999 984 Coils Coil 326 346 - -
Blo11g00999 984 Gene3D - 717 926 - -
Blo11g00999 984 Coils Coil 452 479 - -
Blo11g00999 984 PANTHER - 830 921 - -
Blo11g00999 984 PANTHER BNAA09G28150D PROTEIN 1 662 - -
Blo11g00999 984 PANTHER BNAA09G28150D PROTEIN 713 772 - -
Blo11g00999 984 PANTHER BNAA09G28150D PROTEIN 768 828 - -
Blo11g00999 984 PANTHER - 713 772 - -
Blo11g00999 984 PANTHER - 768 828 - -
Blo11g00999 984 PANTHER - 924 983 - -
Blo11g00999 984 PANTHER BNAA09G28150D PROTEIN 830 921 - -
Blo11g00999 984 Coils Coil 725 843 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo11g00999 - - - pavi:110772686 945.266
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo11g00999 Blo-Chr11:25067658 Blo18g00059 Blo-Chr18:409921 1.43E-06 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g1114 . . . . . . . . Cmo04g01902 Cmo18g00713 . Cma18g00726 . Car18g00674 Sed06g1718 Cpe09g00563 Cpe01g01587 Bhi07g01850 Tan04g0116 Cmetu10g1236 Lac13g0100 Hepe10g1555 . . Cla05g02625 Cam05g2815 Cec05g2851 Cco05g2882 Clacu05g2819 Cmu05g2667 Cre05g2783 . . Cone8ag0714 . Lsi04g00640 . . . . Blo11g00999 . . . . . . . . . Cma04g01803 . Car04g01816 . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004326 1 1 1 1 1 1 2 1 1 1 1 1 3 1 1 2 1 1 2 1 1 1 1 1 1 1 1 4 5 1 42
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo11g00999 Blo_Chr11 FPKM 149.507248 152.718903 126.659843 124.391182 26.519823 27.061024 25.273115 19.257589 15.658155 13.789728