Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo12g00042 ATGCAGATCGTCTCTGGAGCTAGCAGGCTCTCTAGGGCCCTTAAATCATCTCCTGTTTTCGTATATTGGGATCGATTTCTTGGTCCAGATTTTCTTATCGGTGAAGCTCCTTACACTTCACTTCAATGTCGGAACCAACGCGGACTCTTCTCCGTAGCTCCACATTGTGCCAGTGGAATTATTCAAGGCAGTCTTTTGCAAGTGGCACAGTACAACCCAATTCATTCCATGGAGTCTAGGGCATCTTTTTCGACGAAAATAAATGTGATTGAAGGCAGTCCAAGTGGTTGTTGTTTTAGACTATCAAATCTTCGCATTCATGACAATTTTAATTGCAATCTATGCCGAGAAGTTACCAAGGCATGTGCTCGTGTGGGTGCACTCGACTTTGGGAAGATAGCCTTACGGAATCATAATATCTATGGACTGACACCAAGCGTTGGATCCGCCCATCATTTACTGTTGTACGCTGAAGAATACAATGATGCTAAACTCATGATAGAGATTATGAAACTTTTGGAAAGAAATGATTTGCCACTGCAATCTGGTACCGCGGATATTGTGTTCAGAATTTGCTACAATACAGAAAATTGGGATTTGATGACAAAGTATTCAAAGAAGTTTATTAAGGCTGGTATAAAATTGCGACAGACAACATATGAAGTATGGATGGATTTTGCTTCCAAAATAGGAGACGTTGAGTCATTGTGGAAAATTGAGAAGTTGAGATCTGAGTCAATGAAACAGCACTCTCTTGCAACTGGTTTTTCATGTGCTAAGGGTTTTCTATTGGAACGGAAGCCTGGGGAAGCTACTGCCATCCTTGAATTACTATATGGGGTTTTGTCTGATAAAAAGAAGGCACTATTCGTTGGCAAAATACAAAAGCTAGTTAGCGAGTGGCCATTGCAGGTTACTAAGCACCAAAAGGAGGAGGACCGGAAGGCATTTGCAGCATCTCTGAATTCTACTATTAAGACCATGGTTACTGGTCTTCAAAATGTTGGCTTTAATATCAGCATAAACATGGATGAGCTAATTGATAAAGAAAATGTACCAAGCTAA 1065 40.75 MQIVSGASRLSRALKSSPVFVYWDRFLGPDFLIGEAPYTSLQCRNQRGLFSVAPHCASGIIQGSLLQVAQYNPIHSMESRASFSTKINVIEGSPSGCCFRLSNLRIHDNFNCNLCREVTKACARVGALDFGKIALRNHNIYGLTPSVGSAHHLLLYAEEYNDAKLMIEIMKLLERNDLPLQSGTADIVFRICYNTENWDLMTKYSKKFIKAGIKLRQTTYEVWMDFASKIGDVESLWKIEKLRSESMKQHSLATGFSCAKGFLLERKPGEATAILELLYGVLSDKKKALFVGKIQKLVSEWPLQVTKHQKEEDRKAFAASLNSTIKTMVTGLQNVGFNISINMDELIDKENVPS 354
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 2634008 2638163 + BLOR04061 Blo12g00042 67303

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo12g00042 354 PANTHER ADENYLYL CYCLASE 99 352 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo12g00042 - - - qsu:112031940 428.713
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g353 . Blo12g00042 . . . . . . . . . Cma14g01640 . Car14g01466 . . Cpe03g01382 Bhi01g00958 Tan10g0959 . . . . Lcy11g1446 . . . . . . . . Cone15ag0785 . . . . . Cme06g00697 . . . . . . . . . . Cmo14g01679 . . . . . . . . . . . . . Cla05g00621 Cam05g0682 . Cco05g0687 Clacu05g0676 Cmu05g0644 . . Csa03g01421 Chy06g00662 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0009080 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 3 1 34
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo12g00042 Blo_Chr12 FPKM 0.0 0.0 0.0 0.3743 0.0 0.0 0.0 0.0 0.0 0.0