Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo12g00064 ATGGAAATTCCACCAGCTGAGGAGCTTCTAAGGAAGATCCAGGAGCTTGAAGCGAGTGACACTAAGCTAAAGGAAGAGATGTCGAAGCTCATGCTAGCTGGAGGTACTTCAGATTCGAAAACCAACCGGCAAAGTCACCAGTCTCATCGGTGCCACTCGGTATCGCCGCAGCGGTCAAGGTTAGCGCTAAGCAGGAGGAGAGGTGGCGGTTTAGACGGTTCAACGGTTGGGGCAGCGTGGAAACAAGGCTCTGCTTCGTTTAGGCATTCGTCTCCGCTGCAGAAGGAGAGCCGAAGCCACGATCCTCTGCTTTTTGGAGGAGGAAGAAATGGAGGTAGAGGTCCTTCGTCTGGCAATTTCACTGATAGCCAGTATCTGAATATTTTGCAATCCATGGGGCAATCTGTTCATATATTTGATCTAAATGGTCGAATAATCTACTGGAATCGAACTGCTGAAAATACATATGGCTATTCTGCCGCAGAAGCTCTTGGCTGTGATGTAATTGAGATTCTGGCTGATCCTCAAGATTATCAGTTAGCAAATGATATTGTCCGACGTGTTGCTTTGGGGCAGAGTTGGACTGGGCAGTTTCCAGTAAAAAACAAGATGGGCGACAGATTTTTAGTTGTTGCAACCAATACTCCATTTTGTGATGATAATAATGACTTGATTGGGATTATTTGTGTATCAAGCAATTCACAGCCATTTGATGAAGTACAAATTGAGTTACTGAGTCCGAAACATTCAGAACTAGATTTAAGCAATAGCCGACCCAAAAGTATTATCACGTCTAAACTTGGCCTTGATCCTCAACAACCTTTGCAAGTTGCAATTGCATCAAAAATATCAAACTTGGCATCGAAGGTAAGCAACAAAGTGAAGTCAAAGATTATCACAGGAGAAAATAGCTCCGATCGTGAAGGTGAAAGTGGAGATAGTCATCACTCTGGTCATGTTTTTGTAGATGCCGTTGTCCTTGATAATAAGGAGGACGCAAATTCAAGTGGTGCTAGCACGCCTCGTGGAGATTTAAACCCCACTACTCCATTTGGTGTGTTTTCATCTGTGGAGGAGAAGTCCCATGGAAACTCCTCTCGAGAATCTACTGATGCTGGTGAAGAAAAGCCTGCAATCCACAAGATTATTACCTCGAAGGCAGAGGCATGGATTAGTAAGAAAGGCATATCGTGGCCATGGAAAGGAAATGAACGAGAAGGATCAGAGGCAAGGACTACCCGCTTTGGTTGGCCCTGGCTGCAAAATGATCTAGAGGCAGAATTACATGATCACAATAATTCCTCATCAAGCTCGAAAAAAGACAACCAGGCTAATGAAAGTAATCGGCTGGTCAACAACGAGGCCTCGGGATCCTTGTCGTCGTTCAATGTTAACAGTACAAGCAGCGCAAGCAGCTGTGGTAGTAGTAGCAGTAGTGCGATAAATAAAGTTGATATGGACATAGACTGCTTGGATTATGAAATCTTGTGGGAGGACTTGACTATTGGAGAGCAAATCGGACAAGGTTCTTGTGGGACTGTATATCATGCCCTGTGGTATGGATCAGATGTTGCTGTCAAAGTATTTTCCAGGCAAGAATATTCAGAAGATGTGATAGTTTCGTTCAGACAAGAGGAGGGAATCTATTATCTTGAAAAAGATAACTCAGTTTTTGTGGTTGCTCATAGCTCAGCTGGAAAGACAGTTATTGCAAAATATGTATTTGCCTTGGCGACAAAACATTGTACTAGAGCTGTGTATGCTAGTCCCATCAAAACTATCAACAATCATAAGTATAGGGATTTTTGTGGGAAATTTGATGTTGGACTTCTCACAGGCGATGTTAGCTTGAGACTAGAAGCTTCTTGTCTGATTATGACTACTGAAATACTAAGATCAATGCTTTATCGTGTTGATAATATTATACGTGATATTGATTGGGTTATTACTAGCATGTTCCTTGCAATGATGATCGTGCAAAAACTTTATATCCTTGAGGACAAGGATATTGTGAGGGGGAGAACTGTTATGGTGGAGTCTTCTGTTGGTTACGTGGAGTTCATCCTGCCGTCCATGTGTCACCAATTAGAGGAGAGAAATGTTGAAGATAAATAG 2115 42.84 MEIPPAEELLRKIQELEASDTKLKEEMSKLMLAGGTSDSKTNRQSHQSHRCHSVSPQRSRLALSRRRGGGLDGSTVGAAWKQGSASFRHSSPLQKESRSHDPLLFGGGRNGGRGPSSGNFTDSQYLNILQSMGQSVHIFDLNGRIIYWNRTAENTYGYSAAEALGCDVIEILADPQDYQLANDIVRRVALGQSWTGQFPVKNKMGDRFLVVATNTPFCDDNNDLIGIICVSSNSQPFDEVQIELLSPKHSELDLSNSRPKSIITSKLGLDPQQPLQVAIASKISNLASKVSNKVKSKIITGENSSDREGESGDSHHSGHVFVDAVVLDNKEDANSSGASTPRGDLNPTTPFGVFSSVEEKSHGNSSRESTDAGEEKPAIHKIITSKAEAWISKKGISWPWKGNEREGSEARTTRFGWPWLQNDLEAELHDHNNSSSSSKKDNQANESNRLVNNEASGSLSSFNVNSTSSASSCGSSSSSAINKVDMDIDCLDYEILWEDLTIGEQIGQGSCGTVYHALWYGSDVAVKVFSRQEYSEDVIVSFRQEEGIYYLEKDNSVFVVAHSSAGKTVIAKYVFALATKHCTRAVYASPIKTINNHKYRDFCGKFDVGLLTGDVSLRLEASCLIMTTEILRSMLYRVDNIIRDIDWVITSMFLAMMIVQKLYILEDKDIVRGRTVMVESSVGYVEFILPSMCHQLEERNVEDK 704
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 4463753 4469418 + BLOR04083 Blo12g00064 67325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo12g00064 704 PANTHER SERINE/THREONINE-PROTEIN KINASE DDB_G0282963 ISOFORM X1-RELATED 34 547 - -
Blo12g00064 704 MobiDBLite consensus disorder prediction 361 377 - -
Blo12g00064 704 MobiDBLite consensus disorder prediction 332 377 - -
Blo12g00064 704 Gene3D - 522 651 IPR027417 -
Blo12g00064 704 Pfam PAS fold 124 230 IPR013767 GO:0006355
Blo12g00064 704 ProSiteProfiles PAS repeat profile. 121 192 IPR000014 -
Blo12g00064 704 CDD PAS 132 230 IPR000014 -
Blo12g00064 704 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 543 649 IPR027417 -
Blo12g00064 704 MobiDBLite consensus disorder prediction 34 60 - -
Blo12g00064 704 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 34 547 - -
Blo12g00064 704 MobiDBLite consensus disorder prediction 33 117 - -
Blo12g00064 704 TIGRFAM sensory_box: PAS domain S-box protein 124 230 IPR000014 -
Blo12g00064 704 Coils Coil 6 33 - -
Blo12g00064 704 Gene3D PAS domain 133 235 - -
Blo12g00064 704 MobiDBLite consensus disorder prediction 332 360 - -
Blo12g00064 704 SMART pas_2 123 190 IPR000014 -
Blo12g00064 704 SUPERFAMILY PYP-like sensor domain (PAS domain) 127 230 IPR035965 -
Blo12g00064 704 SUPERFAMILY Protein kinase-like (PK-like) 485 560 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo12g00064 Blo-Chr12:4463753 Blo04g00851 Blo-Chr4:9318050 5.33E-11 dispersed
Blo03g01163 Blo-Chr3:37986843 Blo12g00064 Blo-Chr12:4463753 6.85E-50 transposed
Blo16g00817 Blo-Chr16:34317019 Blo12g00064 Blo-Chr12:4463753 1.79E-26 transposed
Blo16g01143 Blo-Chr16:39953800 Blo12g00064 Blo-Chr12:4463753 8.23E-14 transposed
Blo01g00031 Blo-Chr1:414282 Blo12g00064 Blo-Chr12:4463753 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo12g00064 - - jre:108994777 675.626