Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Blo12g00065 | ATGTCCGCGCAGGAGCGGGTTTCTCTTTTCACACTGGTCTACAATGTAGCGAACCTTGGGCGAGTGGAGAAAGAGTTCACCTGCGAGTCAGTTTTTCCATTCACTCCCGAAGCTGAAGCGTCGCGGGTGGGCGAGGCTTCTCAGGTGTTCCTAATGAAGAAGCTTCGACATCCCAATATTCTCCTCTTTATGGGCGTCGTGACCTCACCTCAACATCTTTGCATTGTGACTGAGTTCCTTCCCCGGTTTGTCCTTGAATTTCATTTTCTCTATAAATTCAGCGGAAGTTTATTTCGATTACTTCAGAAGAACACTGCAAAACTAGATTGGAGACGGCGGGTTCATATGGCATTGGATATAGGAGATGGTTATTTGCAGGTGGTGGGTAAATTGATGACATTCCTTCAAGCTTTAAGTATCTGGTTACGACTATTGAATTTCTTACAATTATGCTTTGTTGGCGATTTTGGTTTGTCCCGTCTCAAATACGACACTTATCTTTCAACTAAGACAGGAAAGGGGACGCCGCAATGGATGGCGCCGGAAGTTCTACGTAATGAACCGTCAGATGAAAAGTCTGACATATACAGCTTTGGAGTCGTCTTGTGGGAGCTTGCCACTGAAAAGATCCCTTGGGATAATCTCAATTCCATGCAGGATATAATTCAACTGGATGAAATGAAGCACGTTATTGGTGCGGTGGGTTTCATGAACCAGCGGCTGGAAATCCCAAAAGACGTCGATCCACAGTGGGCTTCCATGATTGAGAGCTGCTGTCACAGTGATCCTCTAAGCCGGCCAACGGTCGAGGAACTTCTGGAAAAGCTTAGGGAGCTTCAAAGAAAATATGCAGTTCAATTTCAGGCTGCTCGATCTGGTGCAGGAGGAAATGCTCGAAAGGAATTATAG | 909 | 45.87 | MSAQERVSLFTLVYNVANLGRVEKEFTCESVFPFTPEAEASRVGEASQVFLMKKLRHPNILLFMGVVTSPQHLCIVTEFLPRFVLEFHFLYKFSGSLFRLLQKNTAKLDWRRRVHMALDIGDGYLQVVGKLMTFLQALSIWLRLLNFLQLCFVGDFGLSRLKYDTYLSTKTGKGTPQWMAPEVLRNEPSDEKSDIYSFGVVLWELATEKIPWDNLNSMQDIIQLDEMKHVIGAVGFMNQRLEIPKDVDPQWASMIESCCHSDPLSRPTVEELLEKLRELQRKYAVQFQAARSGAGGNARKEL | 302 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 12 | 4470400 | 4475040 | + | BLOR04084 | Blo12g00065 | 67326 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Blo12g00065 | 302 | Pfam | Protein tyrosine and serine/threonine kinase | 48 | 276 | IPR001245 | GO:0004672|GO:0006468 | |
| Blo12g00065 | 302 | Gene3D | Phosphorylase Kinase; domain 1 | 32 | 80 | - | - | |
| Blo12g00065 | 302 | ProSiteProfiles | Protein kinase domain profile. | 1 | 284 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Blo12g00065 | 302 | PANTHER | SERINE/THREONINE-PROTEIN KINASE DDB_G0282963 ISOFORM X1-RELATED | 48 | 300 | - | - | |
| Blo12g00065 | 302 | SUPERFAMILY | Protein kinase-like (PK-like) | 48 | 281 | IPR011009 | - | |
| Blo12g00065 | 302 | PANTHER | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED | 48 | 300 | - | - | |
| Blo12g00065 | 302 | Gene3D | Transferase(Phosphotransferase) domain 1 | 94 | 299 | - | - | |
| Blo12g00065 | 302 | Coils | Coil | 269 | 289 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Blo12g00065 | Blo-Chr12:4470400 | Blo09g00517 | Blo-Chr9:16385929 | 5.04E-62 | dispersed | |
| Blo01g00033 | Blo-Chr1:423157 | Blo12g00065 | Blo-Chr12:4470400 | 6.85E-113 | wgd |
Transcription factors information
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| 84559 | PF07714 | PK_Tyr_Ser-Thr | 8.40E-33 | CL0016 | Blo | PK |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Blo12g00065 | - | - | rcu:8258821 | 332.798 |