Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo12g00075 ATGGCGTCATCTCTGATTTCGAATCCAGTGATTAACTCTGATCGCTCTCGAGAATCTTCCAGAAGGAAAAAGAAGAAGAGAACTCATCCGAACAGAGACCATAATCAAGATCAGAGCCCTATCAAATGGAAATCTGAAGCGCTGCAGCAAATTTACTCGTCCAAGCTCGTTCAAGCGCTGAGGCAAGTGAGACTCAGCACTGATGCTTCGTCTCCAAATGAAGCTCCTGACGAAGCTCCTCGCCGGGGCCGCGCTATTCGCGAAGCCGCCGATAGAGTCTTAGCCTTCTCCGCAAGGGGTAAAACTCTATGGAGCCGAGCGATCTTAACGAACCGTTTGAAGCTCAAATTCTCCAAGAGGAAAAGGCAGAGAGTCTCCTACGCTGCGAATAACCGCTCAAAGAAGCCTCGGGTGAGCGTTTTGCGATTGAAAGGCAAGTCTCTACCAGCGGTTCAGAGAAAGGTTCGGCTACTCGGACGTTTGGTTCCTGGGTGCCGGAAGCAATCGTTTCCGGTGATTCTAGAAGAGGCTACTGATTACATAGCCGCTCTTGAGATGCAGGTCCGTGCACTCGCTCAGTTGCTCTCTGCTTCTGATTCTAGTTCCTCCTCACCGCCGAGCTGA 624 50.96 MASSLISNPVINSDRSRESSRRKKKKRTHPNRDHNQDQSPIKWKSEALQQIYSSKLVQALRQVRLSTDASSPNEAPDEAPRRGRAIREAADRVLAFSARGKTLWSRAILTNRLKLKFSKRKRQRVSYAANNRSKKPRVSVLRLKGKSLPAVQRKVRLLGRLVPGCRKQSFPVILEEATDYIAALEMQVRALAQLLSASDSSSSSPPS 207
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 4935493 4936116 + BLOR04094 Blo12g00075 67336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo12g00075 207 Coils Coil 174 194 - -
Blo12g00075 207 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 7 204 IPR044660 GO:0006355
Blo12g00075 207 PANTHER TRANSCRIPTION FACTOR BHLH148-LIKE ISOFORM X1 7 204 - -
Blo12g00075 207 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 155 196 IPR036638 GO:0046983
Blo12g00075 207 CDD bHLH_AtIBH1_like 140 191 IPR044549 GO:0006355
Blo12g00075 207 MobiDBLite consensus disorder prediction 1 44 - -
Blo12g00075 207 MobiDBLite consensus disorder prediction 64 83 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00475 Blo-Chr2:6814485 Blo12g00075 Blo-Chr12:4935493 8.75E-68 dispersed
Blo07g00136 Blo-Chr7:1841532 Blo12g00075 Blo-Chr12:4935493 3.32E-67 dispersed
Blo12g00075 Blo-Chr12:4935493 Blo17g00664 Blo-Chr17:16595889 3.23E-41 dispersed
Blo01g00036 Blo-Chr1:456554 Blo12g00075 Blo-Chr12:4935493 1.63E-92 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo12g00075 - - csin:114313058 241.121