Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo12g00079 ATGAAGACCCAAGTCTCAATTTCCATTGCTTTCTATTATTTTCTGATAAATGTAATTAATGCGTTTGGAAAAAGTTCTGAGTCAGAGTCTAATTCTTCCTATATTCTTTCATGTGGATCTTCAAGTTCCGGCATTGATTCCGAGGGACGCAGATGGGAACCAGATTCCAATTATCTCATTTCTTCCGGAAATTCCATAAAGTCGGCGGCTAACCACCAAGATCCTTCTCTACCTTCTCAAATTCCATATATCTCTGCAAGAATTTTCACATCACAGTCCACATACAGTTTCACCATTCTCCCAAACAAGCGTCACCTCATCAGATTCTACTTTTACGCTTCCTCTTACACCACATTCGATCCTAATGATGCATATTTTTCTGTTCTTGCAAATGAAATTACTCTTCTCAACAATTTCAGTGCTTCCATAACAGCCAAAGCTCTCACACTGGCCCACATAGTCAGGGAATTTTCAATTGTTCCTTTCAAATCAGGCAGGCTAAACATCACTTTTACTCCTTCCTCCCGCCTTGATAAGTCTTATGCCTTTGTTAATGGGATTGAGATAATTCCTATGCCAGACTTTTTTGAGCCAACAACTTTGGTCAGCTTCAATGATCAAATCATTGATGTGGGAAGCTACAATTTGCAGGCCATAGTTAGGTTGAACGTCGGAGGGGCCTACATTCGAGCCATTGACGACTTGGGTTTAAGCCGGACATGGTTTGATGATTCTCCTTTTCTGTTTGGTGCAGCATTTGGAGTCGCATCTCTAAATGAAACTGTTAAAATTCATTATTCTTATGATTTTCCGAGCTTCGTTGCTCCCATAAACGTGTACAGCACAGCGAGAACTATGGGGCCGAGTGCAAAAATCAATCAGAATTACAATCTCACTTGGGTATTTCAAGTTGATGCAAATTTCACTTATTTAGTAAGATTTCATTTCTGTGAGCTTCAACTCACCAAGGTTAATCAGAGAGTATTTGATATTTTTCTTAACAACCAAACAGCCCAGTTATCTGCTGATGTGATAGCCTGGGCAGGGTCTGAGGGAGTGCCTGTGTATAAAGACTATGCCATTTACGTGGCTGACGGCCCTGGTGTTGAAGAAATATGGGTGAGTCTTCATCCGTCTGTATCTGCCAAACCAGAATATTATGATGCAATTCTTAATGGATTGGAAATTTTCAAAATTAACGACACAGCTGGAAACTTGGCTGGTCCAAATCCGGTGCCATCGGATATGCTTCTTAGGGACGACTCAACGAGGAGTTTTTCTTCATCTGGATCGAATAAAAATGGAAAATTTGTGGGTGCAATTGCAGGAGTAGCTTCTAGTTTTGTAGTGATTTGTGTTGTAGGCTTTGTTTTATACCAGAAAAAGAGGAAAAATGCATTTGGTTTGGAATTTAAGTTTGGAAATTGGCTGTCATTATATGGCAATTTTCACTCCTTGAGTAAATCTATGATCGCTGGCAAGAGCGTAGGAAGGAGTCATCTTTCAACTTTAGCTGGAGGTCTATGCAGGCATTTCTCAATAATGGAGATTGTAAAAGGTACAAAGAACTTTGATGAGTCTGAGGTTATTGGAGTCGGAGGATTCGGCAAAGTCTACAGAGGTGTTATTAACGGAAGAACGAAAGTGGCGATAAAACGATCAAACCTGTCTTCACAGCAAGGAGTTCATGAGTTTCAAACAGAAATTGAGATGCTTTCGATGCTGAGACACGGGCATTTGGTATCTTTGATTGGATTCTGTGAAGAAGAGCACGAGATGATTCTGGTTTATGATTTCATGGCGAATGGAACTCTAAGAGAGCACCTTTATAAAACTAACAAGCCTCCATTATCATGGAAACAAAGGTTGGAAATATGTATTGGAGCTGCAAGAGGGCTGCACTACCTCCATACCGGTGCTAAATACACCATTATTCATCGAGACGTTAAGACGACAAATATTTTGTTGGACGAGAAATGGGTCGCAAAAGTTTCCGACTTTGGGCTATCGAGAACTGGTTCTAATCTTCACCAAACTCATGTTAGTACAATGGTGAAAGGAAGTTTTGGGTATTTAGATCCTGAATATTTTCGCAGGCAACAATTAACTGAGAAATCCGATGTGTATTCCTTTGGTGTGGTTCTTTTTGAAGTGTTGTGTGCAAGGCCAGTCCTTAATGCTAATCTACCTAAAGAACAAGTTAGTCTAGCAGATTGGGCTTTACACTGCAAAAGAAAAGGAAAACTTGAAGAAATTGTGGATCCATATCTTGTGGGGAAGATTGACTCGGGGTGCTTTAACAAATATTCCGAGACGGCGGAGAAGTGTTTGGCTGATCAAAGTCTCGATCGTCCTACGATGGGTGATGTGCTATGGAGTCTTGAATTTGCGCTCCAATTGCAGGAGAATTCAGGTGGAGAAAGAAGGATTGTAGAGTCAAAGGCAAACGATGATTATGGAATTTACGATTCAATGTTTGGCATTGAGGAGCAAAGTTTAGTTAGTGAGGACACCAACCCAGGAGCCATTTTGTCACCACAAGTGAACCCAAAGGGAAGATGA 2562 40.67 MKTQVSISIAFYYFLINVINAFGKSSESESNSSYILSCGSSSSGIDSEGRRWEPDSNYLISSGNSIKSAANHQDPSLPSQIPYISARIFTSQSTYSFTILPNKRHLIRFYFYASSYTTFDPNDAYFSVLANEITLLNNFSASITAKALTLAHIVREFSIVPFKSGRLNITFTPSSRLDKSYAFVNGIEIIPMPDFFEPTTLVSFNDQIIDVGSYNLQAIVRLNVGGAYIRAIDDLGLSRTWFDDSPFLFGAAFGVASLNETVKIHYSYDFPSFVAPINVYSTARTMGPSAKINQNYNLTWVFQVDANFTYLVRFHFCELQLTKVNQRVFDIFLNNQTAQLSADVIAWAGSEGVPVYKDYAIYVADGPGVEEIWVSLHPSVSAKPEYYDAILNGLEIFKINDTAGNLAGPNPVPSDMLLRDDSTRSFSSSGSNKNGKFVGAIAGVASSFVVICVVGFVLYQKKRKNAFGLEFKFGNWLSLYGNFHSLSKSMIAGKSVGRSHLSTLAGGLCRHFSIMEIVKGTKNFDESEVIGVGGFGKVYRGVINGRTKVAIKRSNLSSQQGVHEFQTEIEMLSMLRHGHLVSLIGFCEEEHEMILVYDFMANGTLREHLYKTNKPPLSWKQRLEICIGAARGLHYLHTGAKYTIIHRDVKTTNILLDEKWVAKVSDFGLSRTGSNLHQTHVSTMVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPVLNANLPKEQVSLADWALHCKRKGKLEEIVDPYLVGKIDSGCFNKYSETAEKCLADQSLDRPTMGDVLWSLEFALQLQENSGGERRIVESKANDDYGIYDSMFGIEEQSLVSEDTNPGAILSPQVNPKGR 853
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 5419271 5421832 + BLOR04098 Blo12g00079 67340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo12g00079 853 Pfam Malectin-like domain 36 399 IPR024788 -
Blo12g00079 853 ProSitePatterns Serine/Threonine protein kinases active-site signature. 644 656 IPR008271 GO:0004672|GO:0006468
Blo12g00079 853 CDD STKc_IRAK 530 795 - -
Blo12g00079 853 PANTHER OS07G0166700 PROTEIN 23 817 IPR045272 GO:0004714|GO:0006468
Blo12g00079 853 Gene3D - 215 400 - -
Blo12g00079 853 Gene3D - 30 192 - -
Blo12g00079 853 Gene3D Transferase(Phosphotransferase) domain 1 600 818 - -
Blo12g00079 853 Gene3D Phosphorylase Kinase; domain 1 489 599 - -
Blo12g00079 853 Pfam Protein tyrosine and serine/threonine kinase 527 790 IPR001245 GO:0004672|GO:0006468
Blo12g00079 853 ProSiteProfiles Protein kinase domain profile. 524 797 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo12g00079 853 SUPERFAMILY Protein kinase-like (PK-like) 501 797 IPR011009 -
Blo12g00079 853 ProSitePatterns Protein kinases ATP-binding region signature. 530 552 IPR017441 GO:0005524
Blo12g00079 853 SMART serkin_6 524 797 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo12g00079 853 PANTHER RECEPTOR-LIKE PROTEIN KINASE ANXUR2 23 817 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo07g00500 Blo-Chr7:12189256 Blo12g00079 Blo-Chr12:5419271 0 dispersed
Blo09g00310 Blo-Chr9:13219075 Blo12g00079 Blo-Chr12:5419271 0 dispersed
Blo11g00456 Blo-Chr11:4039775 Blo12g00079 Blo-Chr12:5419271 0 dispersed
Blo12g00079 Blo-Chr12:5419271 Blo17g00394 Blo-Chr17:4399334 0 dispersed
Blo12g00079 Blo-Chr12:5419271 Blo10g00313 Blo-Chr10:4747907 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84560 PF12819 Malectin_like 4.10E-41 CL0202 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo12g00079 - - qsu:111989013 1134.78