Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo12g00082 GCTGCATTTTGGTGGCCTCTTCTCGTTCTAGGACTTGCGTATGCGATCGGTAGATTCCTCTTGATGCTCATTCCTCATAATGTGCCTTCTATTGAAGTCGACGCTTCCGATGTTTTGGATGACGGAAATCAAACTCAGGAGAACAGCTACATATATATACCTCCAAGAGGAAGGACACAACAGTCGGATAAGAAAGTTCAGTGCTATGAGCCTGCAACCATGAAATACTTGGGATTTTTTCCAGCATTGACTCCAGCTGAGGTCACAAAGAGAGTGGCGCAGGCAAGGAATGCTCAGAAAACATGGGCCAAAAGTAGCTTCAAGCTAAGGCGGCAGTTCCTAAGAATACTACTGAAGTATATAATTGAACATCAAGAACTTATATGCGAAATATCTTCTCGTGATACTGGGAAGACAATGGTAGATGCTTCTTTGGGAGAAATAATGACAACATGTGAGAAGATCACTTGGCTCCTTTCAGAGGGTGAGAAATGGCTAAAGCCTGAATACCGTTCTTGCGGAAGATCAATGCTTCACAAGAAAGCCAGAGTCGAGTTTCATCCTCTTGGTGTCATTGGAGCCATTGTCTCGTGGAACTATCCTTTTCATAACATTTTTAATCCAATGCTAGCAGCAGTCTTTTCTGGCAATAGTGTTGTAATTAAGGTCTCAGAACATGCAAGCTGGTCTGGATGTTTTTACTTTCGAATAATCCAAGCTGCACTTACTGCTGTTGGGGCCCCTGAAAATGTGGTTGATGTGATAACAGGGTTTGCTGAAACCGGAGAGGCATTAGTGTCTTCAGTTGACAAAATCATATTTGTTGGATCACCTGGTGTGGGTAGGATGATCATGACAAATGCTGCCGAGACACTCATACCAGTTACACTTGAGTTAGGTGGAAAGGATGCATTTATTGTGTGTGACGATGTGGATTTGGACCATGTTGCACACGTTGCTGTCAGAGCTTCCCTTCAATCAAGTGGACAAAATTGTGCTGGAGCTGAGAGATTTTACGTCCACAGGAATATTTATTCTTCATTTGTTAACGAAGTATCAAAAATTGTGAAGTCTGTTGCTGCTGGCCCACCACATTGTGGGAAATATGATATGGGAGCCATCTGCCTGCAAGAGCACTCTGAAAAGCTTCAAACCCTAGTAAATGATGCTTTAGAGAAAGGGGCAGAAATTGTTGCCCGTGGAAGTTTTGGACATTTAGCTGAAGGTGCTGTTGATCAGTATTTTCCCCCAACTGTGATTGTAAATGTGAACCACACAATGAAACTGATGCAAGAGGAGGCATTTGGACCAATAATGCCAATAATGAAATTCAGCACTGATGAAGAAGCCATTACACTTGCAAATGACTCAAAATATGGGCTTGGCTGTGCTGTTTTTTCTGGCAATCAGCATCGTGCAAAGGAGATAGCTTCACAGATTCATTGTGGAGTCGCTGCAATTAATGATTTTGCATCAACTTATATGTGTCAGTCCTTGCCGTTTGGTGGTGTGAAACATAGCGGATTTGGGCGATTTGCAGGAATTGAAGGATTGCGAGCCTGTTGTCTGGTAAAATCAGTTGTTGAGGACAGGTGGTGGCCTTACATCAAAACAAAAATACCTAAGCCTATTCAGTATCCCGTAGCGGAGAACAGTTTCGAGTTTCAGGAGTCACTTGTAGAAACATTATATGGCCTCAACATGTGGGACCGATTGCGAGCATTGGTGAATGTGTTGAAGATTGTTTCAGAACACAACTCTTCTTCCACTAACAATGCTGCAGCTACAAGCAAGAGGACCAGC 1803 43.04 AAFWWPLLVLGLAYAIGRFLLMLIPHNVPSIEVDASDVLDDGNQTQENSYIYIPPRGRTQQSDKKVQCYEPATMKYLGFFPALTPAEVTKRVAQARNAQKTWAKSSFKLRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSCGRSMLHKKARVEFHPLGVIGAIVSWNYPFHNIFNPMLAAVFSGNSVVIKVSEHASWSGCFYFRIIQAALTAVGAPENVVDVITGFAETGEALVSSVDKIIFVGSPGVGRMIMTNAAETLIPVTLELGGKDAFIVCDDVDLDHVAHVAVRASLQSSGQNCAGAERFYVHRNIYSSFVNEVSKIVKSVAAGPPHCGKYDMGAICLQEHSEKLQTLVNDALEKGAEIVARGSFGHLAEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFSTDEEAITLANDSKYGLGCAVFSGNQHRAKEIASQIHCGVAAINDFASTYMCQSLPFGGVKHSGFGRFAGIEGLRACCLVKSVVEDRWWPYIKTKIPKPIQYPVAENSFEFQESLVETLYGLNMWDRLRALVNVLKIVSEHNSSSTNNAAATSKRTS 601
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 5523264 5529672 - BLOR04101 Blo12g00082 67343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo12g00082 601 SUPERFAMILY ALDH-like 51 529 IPR016161 GO:0016491
Blo12g00082 601 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 305 500 IPR016163 GO:0016620
Blo12g00082 601 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 325 336 IPR016160 GO:0016491
Blo12g00082 601 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 297 304 IPR029510 GO:0016491
Blo12g00082 601 Pfam Aldehyde dehydrogenase family 61 527 IPR015590 GO:0016491
Blo12g00082 601 PANTHER ALDEHYDE DEHYDROGENASE-LIKE PROTEIN YHR039C-RELATED 3 562 - -
Blo12g00082 601 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 65 525 IPR016162 GO:0016491
Blo12g00082 601 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 3 562 - -
Blo12g00082 601 CDD ALDH_F15-22 69 531 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo12g00082 Blo-Chr12:5523264 Blo02g00869 Blo-Chr2:33613475 1.39E-65 dispersed
Blo16g00548 Blo-Chr16:22500135 Blo12g00082 Blo-Chr12:5523264 2.89E-40 dispersed
Blo12g00082 Blo-Chr12:5523264 Blo13g00042 Blo-Chr13:604901 2.01E-60 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo12g00082 - - gra:105796901 1051.2