Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo12g00090 | ATGAATCTGAATCAAGGCAAGGGATCTATGACGACAGCTAGTCCTAGTGCTGCTCTCAAATCCGGCGAATTTGTTCCCGACCAATTTCCGGCGGGTCTACGAGTTCTGGTCGTCGATGACGATCCGACCTGCTTGAGGATCTTGGAGAAGATGCTTCAATTTTGTCTCTACAACGTTACCAAATGCAATCGAGCAGAGATTGCGTTGTCTAAGCTTCGAGATAACAAAAACGGCTTTGATGTTGTAATTAGCGATGTCCACATGCCAGATATGGATGGATTTAAGCTCTTAGAACACATTGGCCTAGAAATGGACTTACCCGTTATCATGATGTCTTCCGATGAAGGGAAAGATGTTGTCATGAAGGGAGTGACTCATGGCGCTTGTGATTATCTCATAAAACCCGTTCGAATTGAGGCTTTGAAGAACATATGGCAACATGTAGTTCGGCGGAAGTGGAATGAGTGGAAGGATCTAGAACAATCTGGAAGTGTGGAAGATGGTGATAGGCTGCAGAAAAATTGTGACGAAGTGGACTACTCGTCCTCGGCAAATGAAGGAAATTGCAAAAATTTGAAGAGGAGGAAGGACGACGAAGAAGAAGCAGAGGAACGAGAAGATTCATCGACATTGAAGAAGCCACGTGTTGTTTGGTCAGTCGAGCTTCATCAACAGTTTGTTGCTGCTGTTAACCAACTAGGCATTGAAAAGGCTGTTCCTAAGAAAATTTTGGAGTTGATGAATATTCCGGGACTCACTCGAGAAAATGTTGCCAGTCATCTTCAGAAATATCGTTTGTATCTGAGAAGGCTCAGTGGAGTTTCACCACACACAAGTAATTTGAACAATTCTTTCATGACCCCACAAGAAGCAATGTTTGGGCCGATTTCAGCACTCAACGGGATTGATCTTCAGGCTCTTGCTGTCGCTGGAAAACTCACACCCCAAAGTCTTGCCTCACTTCAAGCTTCCGGGCTTGGTAGATCTTCGCCAAAATCCAACTTAATATCTGATCAGAGGAACATTTTTAGCTTTGAAAATCCAAAATTAAGATTTGGTGAGGCCCAGCCTCAGCATGTCAACAGTAGTAAACCAATAAATTTACTCCATGGAATCCCCACCACCATGGAAGCAAAGCAGCTTGCAAATTCGGGCCAATCTGCACAATCCCATGGAGGCATGAATATGCAAGTAAACATCCATGGAGGCCAAACCAACTCTATAGTAACGCAGATGGTGCAACCTCAATCATCAATCAGACAGTCGATCAGAATTCCTGGTGGGGTTTTGACAAACAATCTACCTCCACCAGAAACTTCTATTTTCAATTTTCCAATGAACCAAACAGCCGACTTTCCAGGAAATAGTTTGCCTTTTGAAACAGCACCAGCTATTCTTAGTCCTCCATCTAAAGGGACATTCCCTGAAGAATTAAATTTAGAAATAAAACAATCGGGAAGATTTATGTCAAATTATGATGTATTTAATGACTTGCACGAGGAGAAATCTCGGGATTGGAACTTGCAGAATCCCGGCTTGAACTTCAATCCCTCTCATGGAGACCTGGATATCTCATCTTCAGGTTTACATAATCAAAACTTTGCCAATGGCCAAAGGTTTAGACAGGAAATCAATGTTTCTGCGACTCGGCATGAGAATGGACAGATTGGCGGACAGCAACTGAATTCTATACTTTTTGACAATCCAGTAAAGGTCAAAGCTGAGACAATTCCAGATCCAAGTTGTGTCTTATTTCCGGAAAACTTCGAAGGGGATGATCTAATGAGTGCCCTTTTGAGACAACAAGAAAATTTCGGACCAGTCTCCGCCGAAAGCAAATATGACTTCGACAGTTGCTTTGGGTGGTCTATGAAGGAACATGTAAAATACTTGACCATGTCATTGCAAAATGGTGACATGAAAGGTTTTTCCCCTCCCAGTTTTTCTGATTTTGGCACTGTGGTTTTAGTTATATTTGCTGAAGCTCTTCTGTCTGCTGTTGAATCATGTCATCTTTGTAAGGGGAAGCCTTTCAACTCGGAATAA | 2046 | 42.62 | MNLNQGKGSMTTASPSAALKSGEFVPDQFPAGLRVLVVDDDPTCLRILEKMLQFCLYNVTKCNRAEIALSKLRDNKNGFDVVISDVHMPDMDGFKLLEHIGLEMDLPVIMMSSDEGKDVVMKGVTHGACDYLIKPVRIEALKNIWQHVVRRKWNEWKDLEQSGSVEDGDRLQKNCDEVDYSSSANEGNCKNLKRRKDDEEEAEEREDSSTLKKPRVVWSVELHQQFVAAVNQLGIEKAVPKKILELMNIPGLTRENVASHLQKYRLYLRRLSGVSPHTSNLNNSFMTPQEAMFGPISALNGIDLQALAVAGKLTPQSLASLQASGLGRSSPKSNLISDQRNIFSFENPKLRFGEAQPQHVNSSKPINLLHGIPTTMEAKQLANSGQSAQSHGGMNMQVNIHGGQTNSIVTQMVQPQSSIRQSIRIPGGVLTNNLPPPETSIFNFPMNQTADFPGNSLPFETAPAILSPPSKGTFPEELNLEIKQSGRFMSNYDVFNDLHEEKSRDWNLQNPGLNFNPSHGDLDISSSGLHNQNFANGQRFRQEINVSATRHENGQIGGQQLNSILFDNPVKVKAETIPDPSCVLFPENFEGDDLMSALLRQQENFGPVSAESKYDFDSCFGWSMKEHVKYLTMSLQNGDMKGFSPPSFSDFGTVVLVIFAEALLSAVESCHLCKGKPFNSE | 681 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 6259518 | 6262422 | + | BLOR04109 | Blo12g00090 | 67351 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo12g00090 | 681 | CDD | REC_typeB_ARR-like | 35 | 149 | - | - | |
Blo12g00090 | 681 | Pfam | Myb-like DNA-binding domain | 215 | 265 | IPR001005 | - | |
Blo12g00090 | 681 | MobiDBLite | consensus disorder prediction | 189 | 210 | - | - | |
Blo12g00090 | 681 | SUPERFAMILY | Homeodomain-like | 210 | 270 | IPR009057 | - | |
Blo12g00090 | 681 | TIGRFAM | myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class | 213 | 266 | IPR006447 | GO:0003677 | |
Blo12g00090 | 681 | ProSiteProfiles | Response regulatory domain profile. | 34 | 149 | IPR001789 | GO:0000160 | |
Blo12g00090 | 681 | SUPERFAMILY | CheY-like | 32 | 156 | IPR011006 | - | |
Blo12g00090 | 681 | PIRSF | RR_ARR_type-B | 9 | 614 | IPR017053 | GO:0003677|GO:0003700|GO:0009736 | |
Blo12g00090 | 681 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR | 9 | 417 | IPR045279 | GO:0009736 | |
Blo12g00090 | 681 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR | 9 | 417 | - | - | |
Blo12g00090 | 681 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR | 439 | 589 | - | - | |
Blo12g00090 | 681 | SMART | REC_2 | 33 | 145 | IPR001789 | GO:0000160 | |
Blo12g00090 | 681 | Pfam | Response regulator receiver domain | 35 | 143 | IPR001789 | GO:0000160 | |
Blo12g00090 | 681 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR | 439 | 589 | IPR045279 | GO:0009736 | |
Blo12g00090 | 681 | MobiDBLite | consensus disorder prediction | 177 | 210 | - | - | |
Blo12g00090 | 681 | Gene3D | - | 210 | 272 | - | - | |
Blo12g00090 | 681 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 212 | 269 | IPR017930 | - | |
Blo12g00090 | 681 | Gene3D | - | 33 | 165 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo01g00772 | Blo-Chr1:11099972 | Blo12g00090 | Blo-Chr12:6259518 | 9.23E-125 | dispersed | |
Blo07g00160 | Blo-Chr7:2078173 | Blo12g00090 | Blo-Chr12:6259518 | 0 | dispersed | |
Blo08g00530 | Blo-Chr8:15145143 | Blo12g00090 | Blo-Chr12:6259518 | 1.80E-104 | dispersed | |
Blo12g00090 | Blo-Chr12:6259518 | Blo16g00756 | Blo-Chr16:31212837 | 1.12E-110 | dispersed | |
Blo13g01068 | Blo-Chr13:32873275 | Blo12g00090 | Blo-Chr12:6259518 | 1.14E-23 | dispersed | |
Blo12g00090 | Blo-Chr12:6259518 | Blo01g00060 | Blo-Chr1:747686 | 0 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
12964 | PF00072 | Response_reg | 4.10E-22 | CL0304 | Blo | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo12g00090 | - | K14491 | qlo:115994534 | 779.63 |