Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo12g00103 ATGGAAATTGGGTTAATTTTTAAACATGTGGGAATTAACGGGAAAGTTAACTCGGGGGTTACCGCTGCAGTACATAAGAGAAGATGTCCAGTTGTTGCATTGAATTGCCATCGTCAACTATCTACTAAGTTAATTGTCTTGCACAGTTTAAGCCATGGGTTCACTCGAGCAAGTACAAAGCGTAAGCTTAATCTTCTGCGTGCTGGTTTTTGGGACTCCATCAAATCTGGGTTTTTAAAGAACAATACAACTCAGATTGTTGACACTCCCTCTATCCCTGATGAGGAAGAACCATTGCCAGAGGAGTTTGTTCTCACTGAGAAACCACTACCAGATGGAGGAATTGAACAAATAATATTCTCTTCGGGAGGAAATGTCGACGTGTATGATGTTCAAACCTTATGTGATAAGGTGGGCTGGCCACGTAGGCCGCTATCAAAATTGGCTGCTTCTCTAAAGAATAGCTACATGGTGGCCACGTTACATTCTATAAGAATAGCACCTGGTGCAGAGGAAAATGGGCAGAGGAAGCTCATTGGTATGGCTCGTGCAACATCAGATCACGCGTTCAATGCAACCATATGGGACGTCCTTGTCGACCCTTCTTATCAGGGCCAAGGTCTGGGCAAGGCCCTAGTTGAGAAGATTATAAGGGCGCTTCTGCAGAGAGACATAGGCAACATAACACTTTTTGCAGATAGTCAAGTTGTGGAATTCTACAGGAATTTAGGTTTTGAACCAGACCCTGAGGGGATTAAAGGAATGTTTTGGTACCCCAAACATTGGTGTTGTTTTTTGTGGCAGCATGTTAAACTTGAACATGCATTAGATAAAATGGAATTGCCCGAGATTGGAGTCTTAATTTGGAACCAAATAAATTCAAATGCAGATGGAGAAACGCAGGTTTTCTATGCAATGTCTCGCTGCTTTCCCTTTCCTCCACCAGGATATGAAAAGAAGGCTAGGCCAGAGGACGTTGACCTGCTGAAAAAGGAGAAGAGTAGAGAGAAAAAGCTTAGGAAGGAGAAGAAGGAGAAGGAAAAGAGAGAGAGCAAAGAAAAAAAGCACAAGGATAGAGAAAACAAGGAGAAAAAGGTTAAGAACAGGGACAAAAGGAATGACAAGGATAAATATACTAAAAAAGCCTCAGATGAGAAGAGACTGTTGGGTAAAAGTCAAACTCACAATGGAGGGACTCTTGCTCCTAAAGAACACAAAGTCGATGATAGTATTCTGTTTGAGAAGACCAATACTGGGCAATCTGCTGGTTTCGCAGGAGCTAAGCTCATTCAGGACAACCATCTGGCTGAGAAAACAAAAAGATCAGAACCCATGCATGATGCAGGAAATAGAATCAAGGATAAAGAAGGGGAGAAGTTTTCCACTACACAATCAAAACGAGATGATTGGATGGTCAGACTGGTGGCCAAAGGTTCTGCCACATCTATGGAAGTTGTGGAAAAGATTAAGGACCATAAAGTTGATGTCAGTAAAATTGGCAGGCTGGGAATTAGAGAGGATGCAAAGTTTAGCACGAGTGGAATGGTTCAGAACCCTGCTGCTACAGTACGAACTGGAGTTGAAGTTGTGTCTAAACCTCCATTGGGGAAAAAAGACTCCAAACCATTGGAAAAAAAGACGGAGGGAAGGAAGGAGACGAAAGAAGAGATTAAAGAGGGCGAAGGCAATGAAAAACGAAAGGAAAGGCACAAGGATAAAGATAGAGAGAAGAAAGTTAAAACAAAGGATAAAGACAGGGAAAATGAGAAAAAGAAAGAAGAAAAGAAGACGGAAAAACTTGAAGACAGGCGAGGAGAGATGAATGCATCAAAAGAAAGCAACAAGGAAAAATCTATAAGCAGCCATTCTATACCTGCTGATGGTGACATGTCTGCCACTCCGGAAGGAAATTCTAAGAAACGAAAGGACTTTGAAAGCAATGGTTTTGTGCATACGGGCGACATCGGACCAATTAAGTTTCAAAAGGTCACTTCCTCTAGTCATCCCAATCCTGGAAATGGTAAAATATTGGAGCCATGCCAAACTCCCGTAACGTCTGCGCAAGAGAGACAGGGAATTGCGAATAATCTTAACTTGGATGGTAAAGAACGGAAGATTAATGGTGTTAGAGAAGCTCACCCATCTGCCTCCTCCATTAAACCCACTCCCACCAGGCAAGTAGATCAAATAGCGCCGCCACCTCCAAAACCACCCCATCCAGATTGCAGGTACTTCAGCCAAATATATTCATTGCCCAAAGTGGAGGAATGGTCTGATTTTTGTGACCAAGAGTGGCTTTCCAAAAGCAGTATCGCCCTAGAAAAGAAGCCAAAATTTTCTGAGGTGGAGGAAATGCCACTGGTTTGGGCAGAGGCGTTTCCTATAGAGTCTGCTGATGTTTGTGCTCTGCCGTATGTTATTCCATACTGA 2430 42.8 MEIGLIFKHVGINGKVNSGVTAAVHKRRCPVVALNCHRQLSTKLIVLHSLSHGFTRASTKRKLNLLRAGFWDSIKSGFLKNNTTQIVDTPSIPDEEEPLPEEFVLTEKPLPDGGIEQIIFSSGGNVDVYDVQTLCDKVGWPRRPLSKLAASLKNSYMVATLHSIRIAPGAEENGQRKLIGMARATSDHAFNATIWDVLVDPSYQGQGLGKALVEKIIRALLQRDIGNITLFADSQVVEFYRNLGFEPDPEGIKGMFWYPKHWCCFLWQHVKLEHALDKMELPEIGVLIWNQINSNADGETQVFYAMSRCFPFPPPGYEKKARPEDVDLLKKEKSREKKLRKEKKEKEKRESKEKKHKDRENKEKKVKNRDKRNDKDKYTKKASDEKRLLGKSQTHNGGTLAPKEHKVDDSILFEKTNTGQSAGFAGAKLIQDNHLAEKTKRSEPMHDAGNRIKDKEGEKFSTTQSKRDDWMVRLVAKGSATSMEVVEKIKDHKVDVSKIGRLGIREDAKFSTSGMVQNPAATVRTGVEVVSKPPLGKKDSKPLEKKTEGRKETKEEIKEGEGNEKRKERHKDKDREKKVKTKDKDRENEKKKEEKKTEKLEDRRGEMNASKESNKEKSISSHSIPADGDMSATPEGNSKKRKDFESNGFVHTGDIGPIKFQKVTSSSHPNPGNGKILEPCQTPVTSAQERQGIANNLNLDGKERKINGVREAHPSASSIKPTPTRQVDQIAPPPPKPPHPDCRYFSQIYSLPKVEEWSDFCDQEWLSKSSIALEKKPKFSEVEEMPLVWAEAFPIESADVCALPYVIPY 809
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 7436155 7446775 + BLOR04122 Blo12g00103 67364

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo12g00103 809 MobiDBLite consensus disorder prediction 711 739 - -
Blo12g00103 809 MobiDBLite consensus disorder prediction 435 464 - -
Blo12g00103 809 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 118 277 IPR000182 GO:0016407
Blo12g00103 809 Coils Coil 583 610 - -
Blo12g00103 809 Coils Coil 326 361 - -
Blo12g00103 809 PANTHER MYB-LIKE PROTEIN X 306 809 - -
Blo12g00103 809 MobiDBLite consensus disorder prediction 506 690 - -
Blo12g00103 809 CDD NAT_SF 170 230 - -
Blo12g00103 809 Pfam Acetyltransferase (GNAT) family 127 245 IPR000182 GO:0016407
Blo12g00103 809 MobiDBLite consensus disorder prediction 320 403 - -
Blo12g00103 809 MobiDBLite consensus disorder prediction 634 648 - -
Blo12g00103 809 MobiDBLite consensus disorder prediction 320 391 - -
Blo12g00103 809 MobiDBLite consensus disorder prediction 534 618 - -
Blo12g00103 809 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 127 251 IPR016181 -
Blo12g00103 809 PANTHER MYB-LIKE PROTEIN X 306 809 - -
Blo12g00103 809 Gene3D - 122 258 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo12g00103 K22450 SNAT; aralkylamine N-acetyltransferase [EC:2.3.1.87] - jre:108986255 371.318
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g00183 Blo-Chr4:1502245 Blo12g00103 Blo-Chr12:7436155 2.94E-12 transposed
Blo06g00948 Blo-Chr6:32707541 Blo12g00103 Blo-Chr12:7436155 2.03E-24 transposed
Blo01g00335 Blo-Chr1:4021244 Blo12g00103 Blo-Chr12:7436155 1.52E-159 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g928 . Blo12g00103 Bda03g01140 . Bpe04g01083 . . . . Cmo17g00092 . Cma14g01909 . . Sed02g1530 . Cpe03g01609 Bhi01g00196 Tan10g0491 Cmetu06g0292 Lac12g2013 Hepe05g1778 . Lcy11g1793 Cla06g00774 Cam06g0824 Cec06g0839 Cco06g0845 Clacu06g0827 Cmu06g0799 Cre06g1581 Cone14ag0246 Cone15ag0264 . . Lsi05g01861 . Chy05g00576 Cme06g00365 . . . . . . . . Sed09g0171 . Cmo14g01963 . Cma17g00086 . Car17g00081 Cpe12g00079 . Bhi12g01479 Tan06g2285 Cmetu05g0427 . . . . Cla05g00329 Cam05g0359 Cec05g0363 Cco05g0365 Clacu05g0356 Cmu05g0341 Cre05g0404 Lsi09g01125 Csa03g01075 Chy06g00345 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001946 1 3 2 1 1 2 4 2 2 2 2 2 4 2 2 2 2 0 4 2 2 2 2 2 3 1 1 6 2 1 64
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12966 PF00583 Acetyltransf_1 6.80E-14 CL0257 Blo TR
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo12g00103 Blo_Chr12 FPKM 46.208099 52.937279 54.397972 53.577339 71.263145 63.978539 61.213558 29.633768 33.089375 30.501358