Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo12g00146 ATGCGCAGGTGGCTTTGTTGCAATTGTCATGGTGATGAGCCTTACCCATCTAATGACAATGAGTACCTCAAAAGTCCACCAGACTATGCTGATGGTCATCCAAAGAGCTCCAAGGCATCTGCCCTGGTTAAAACTGAAGTACAGAAGGCACCACCAGCTATCGAAGTCCCTGCATTATCTTCTGAAGAACTTAAGGAAAAGACAGATAATTTTGGTTCCAAATCATTGATTGGTGAAGGATCTTATGGTAGAGTATATTATGCTAGCCTAGATAGTGGAAAAGCTGTGGCTGTAAAGAAGCTTGATGTTTCATCTGAGCCTGACTCAAATATTGAGTTTTTGACCCAGGTTTCGATGGTGTCAAGATTGAAACATGAAAATCTTGTTGAGTTGCTTGGTTATTGTGTTGAAGGAAATCTCCGTGTACTTGCATATGAATTTGCAACCATGGGTTCTCTACATGACATATTGCATGGCAGAAAGGGAGTGCATGGGGCACAGCCAGGTCCTGTGCTTGACTGGATACAGCGAGTGAAGATTGCAGTTGATGCAGCAAGAGGACTGGAATACTTGCATGAGAAGGCTCAACCTTCTGTTATACACAGAGATATAAGATCTAGCAATGTGCTTCTCTTTGAGGACTTCAAGGCAAAGGTTGCAGATTTCAACCTTTCAAATCAAGCTCCTGACATGGCTGCTCGCCTCCACTCTACTCGAGTTTTGGGAACCTTTGGCTATCATGCTCCGGAGTATGCAATGACTGGACAATTGACGCAGAAAAGTGATGTATATAGTTTTGGAGTGGTTCTCCTTGAGCTTCTCACTGGAAGGAAACCTGTTGATCATACAATGCCTCGGGGCCAGCAGAGTCTTGTTACTTGGGCAACTCCAAGGCTCAGTGAAGACAAAGTTAAACAGTGTGTAGATCCAAAGCTGAAAGGAGAATATCCCCCTAAAGGAGTTGCCAAGTTGGCGGCCGTTGCAGCCCTGTGCGTGCAGTATGAATCTGAGTTCAGGCCGAATATGAGCATTGTTGTCAAAGCACTTCAACCCCTCCTCAAGCCACCTCCGCCCGCACCGGAAACTTGA 1089 45.27 MRRWLCCNCHGDEPYPSNDNEYLKSPPDYADGHPKSSKASALVKTEVQKAPPAIEVPALSSEELKEKTDNFGSKSLIGEGSYGRVYYASLDSGKAVAVKKLDVSSEPDSNIEFLTQVSMVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVHGAQPGPVLDWIQRVKIAVDAARGLEYLHEKAQPSVIHRDIRSSNVLLFEDFKAKVADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQQSLVTWATPRLSEDKVKQCVDPKLKGEYPPKGVAKLAAVAALCVQYESEFRPNMSIVVKALQPLLKPPPPAPET 362
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 10172077 10174709 + BLOR04165 Blo12g00146 67407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo12g00146 362 MobiDBLite consensus disorder prediction 16 38 - -
Blo12g00146 362 Pfam Protein tyrosine and serine/threonine kinase 75 349 IPR001245 GO:0004672|GO:0006468
Blo12g00146 362 PIRSF ILK 35 355 - -
Blo12g00146 362 Gene3D Transferase(Phosphotransferase) domain 1 149 355 - -
Blo12g00146 362 SUPERFAMILY Protein kinase-like (PK-like) 56 357 IPR011009 -
Blo12g00146 362 SMART tyrkin_6 71 349 IPR020635 GO:0004713|GO:0006468
Blo12g00146 362 Gene3D Phosphorylase Kinase; domain 1 42 147 - -
Blo12g00146 362 PANTHER PTI1-LIKE TYROSINE-PROTEIN KINASE 3 1 354 - -
Blo12g00146 362 ProSitePatterns Protein kinases ATP-binding region signature. 77 100 IPR017441 GO:0005524
Blo12g00146 362 ProSitePatterns Tyrosine protein kinases specific active-site signature. 199 211 IPR008266 GO:0004672|GO:0006468
Blo12g00146 362 ProSiteProfiles Protein kinase domain profile. 71 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo12g00146 362 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 1 354 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo05g00237 Blo-Chr5:2615344 Blo12g00146 Blo-Chr12:10172077 3.98E-167 dispersed
Blo06g00558 Blo-Chr6:28073192 Blo12g00146 Blo-Chr12:10172077 3.21E-161 dispersed
Blo12g00146 Blo-Chr12:10172077 Blo12g00615 Blo-Chr12:24422904 1.68E-168 dispersed
Blo01g00293 Blo-Chr1:3666334 Blo12g00146 Blo-Chr12:10172077 0 wgd
Blo12g00146 Blo-Chr12:10172077 Blo02g00436 Blo-Chr2:5822146 2.12E-20 wgd
Blo12g00146 Blo-Chr12:10172077 Blo07g00096 Blo-Chr7:1376738 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84562 PF07714 PK_Tyr_Ser-Thr 6.00E-47 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo12g00146 K13436 - egr:104456273 616.69