Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo12g00198 ATGGATTTTGTGCCAAAAACAAAAGGGTATGCTGATAGAGTAGAGGAAGAGGAAGAAGAGGTAAAAAGTAGTTTTTCTGCTTACAAGCTTCCATTTTCTCCTGGCTCTTCATCTTCTCCTTCTGTATATAAGCTATGGCTAGGGAATAGTGAGTCTAAAGAGGAAGCCTCAAGATCTTATCCTGTGAATGAACTTCCTTCACCCGAAACCCCCATTAACAGCCACGAGAAGCTTGAGTCTATAGACTTATCGTTGCGAATCGACAACGACATGGGTGGGGATGTCAATGGAGCTCGAAGCTATGGTCATGGAGGTTGCAGCGAAAGAGAGCACATGTTTGATAAAGTAGTGACTCCCAGCGATGTTGGAAAGCTAAATCGTTTAGTAATTCCGAAGCAACACGCTGAGAAATACTTTCCCATCGATTCTTCAACAAATGAAAAGGGTTTGATTCTCAATTTCGAAGATCGAAATGGAAAATCTTGGCGGTTTCGTTACTCTTATTGGAACAGTAGCCAAAGCTACGTGATGACAAAAGGATGGAGTAGGTTTGTGAAGGAGAAGAAGCTAGACGCTGGGGATATCGTTTCATTCGAACGGGGAGTGGGAGAGGTTGGAAAGCACCGCCTCTTCATAGACTGGCGGCGCCGCCCAGATGCGCCATCTAATCTGGCGTCGCTCGTTCATCTTCCTCAGTCTATGAGATGGGGTAGTAGACAGTTGATTCCTCCATTAATGGCGGCGCCTTTTCCTCCTCAGTACCGCCATTTTCAAAACCTTAATTACAGTACGATCAATCCGTCTTACTATCAGAGAGGAGCTTCCGACTACTGCAACGGAGGAAGCTTCGAATCGGGTTCTCTTTATTACTTAAGACCGTCTTCTTCTTATGACATTGGAGCACTGCAACAAGGTGGGGAAGCTGCTCCAATGGTGATCGATTCAGTACCAGTAGTTCACCAAGGAAAATCTAAACCTAAACGCCTAAGACTGTTTGGTGTGAATTTGGAGTGTCCAGGACCAGAAGAACCCATTAGTAATCCTCATTTCGCAAGCTCCTCTTCAGTTCCTTACGTTCAATTGCGGCCCCCATTTTCAACTGAGTTCTCAGCAAGAGGAAAAGGTTCCTCCTCGTTCGATTGGAATCTGCCTTGA 1155 45.28 MDFVPKTKGYADRVEEEEEEVKSSFSAYKLPFSPGSSSSPSVYKLWLGNSESKEEASRSYPVNELPSPETPINSHEKLESIDLSLRIDNDMGGDVNGARSYGHGGCSEREHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPIDSSTNEKGLILNFEDRNGKSWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFERGVGEVGKHRLFIDWRRRPDAPSNLASLVHLPQSMRWGSRQLIPPLMAAPFPPQYRHFQNLNYSTINPSYYQRGASDYCNGGSFESGSLYYLRPSSSYDIGALQQGGEAAPMVIDSVPVVHQGKSKPKRLRLFGVNLECPGPEEPISNPHFASSSSVPYVQLRPPFSTEFSARGKGSSSFDWNLP 384
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 12940147 12941301 - BLOR04217 Blo12g00198 67459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo12g00198 384 MobiDBLite consensus disorder prediction 1 24 - -
Blo12g00198 384 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR NGA2 86 352 - -
Blo12g00198 384 MobiDBLite consensus disorder prediction 29 43 - -
Blo12g00198 384 MobiDBLite consensus disorder prediction 55 75 - -
Blo12g00198 384 SUPERFAMILY DNA-binding pseudobarrel domain 109 219 IPR015300 -
Blo12g00198 384 MobiDBLite consensus disorder prediction 1 43 - -
Blo12g00198 384 Pfam B3 DNA binding domain 113 217 IPR003340 GO:0003677
Blo12g00198 384 Gene3D - 106 225 IPR015300 -
Blo12g00198 384 ProSiteProfiles B3 DNA-binding domain profile. 113 218 IPR003340 GO:0003677
Blo12g00198 384 SMART B3_2 113 218 IPR003340 GO:0003677
Blo12g00198 384 CDD B3_DNA 111 200 IPR003340 GO:0003677
Blo12g00198 384 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 86 352 IPR044800 GO:0003700
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo01g00258 Blo12g00198 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g00788 Blo-Chr3:32848880 Blo12g00198 Blo-Chr12:12940147 1.06E-89 dispersed
Blo12g00198 Blo-Chr12:12940147 Blo19g00130 Blo-Chr19:3745824 7.31E-91 dispersed
Blo06g00971 Blo-Chr6:32997555 Blo12g00198 Blo-Chr12:12940147 1.71E-48 transposed
Blo09g00482 Blo-Chr9:16048397 Blo12g00198 Blo-Chr12:12940147 3.06E-50 transposed
Blo11g00830 Blo-Chr11:14148534 Blo12g00198 Blo-Chr12:12940147 2.60E-49 transposed
Blo01g00258 Blo-Chr1:3310680 Blo12g00198 Blo-Chr12:12940147 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12975 PF02362 B3 7.50E-30 CL0405 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo12g00198 - - vvi:100259130 368.237