Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo12g00237 ATGGAAGATGATTGGGATCTGCAAGCGGTGGTTAGAGGCTACGCCTCGACCACCATAACTAATTATTATTCAACTTCTTCCGCAGCTGTCTCTCATGGCTCCGACCGTTCCCACTCTGACCAACCTCCTTCAAACTTCCTCTCTCATTCTCCCCCTTTTGAACCGAGAAATGATATGGAGGGGTTGCAGCAACTCTGCGACCCTTTCTTCCCCAAATCTCACCCTCGCCTGGTTTCTCCTATCTCTGCTCTTGACGTTCGAACGGAGCAGAAACAAATCACCCAATTGCAGTCTCCGCGATCCAAAAGAAGGAAAAATCAGATGAAAAAAGTTTGTCGAGTTACAGCAGAAAGCCTCTCTTCCTCTGTATGGGCTTGGCGTAAATATGGACAGAAGCCCATCAAAGGCTCTCCATATCCAAGAGGATATTACAGATGTAGCAGCTCAAAGGAGTGTCTGGCCCGAAAACAGGTGGAGCGGGACAGATCCGACTCGGGAATGTTCATAGTCACATACACTGCGGAGCACAATCATCCGGCACCGACACACCGGAACTCGCTCGCCGGTTCGACCCGGCAGAAGCCTTCCACTTCCCAAACCGTCTCTGGCGGTGAGCAGAACAGATCCCAAGCAACACAGCTTGCTTGCTTTTCATCCTCCGCGGAAGACGGGGTTGTTCGCCGGAGCACAGAAACGGAAAGGAAGGGAGAAAAAGAAGACTTACTAGAAGACGAAGAAGATGAACAAGGAACGTGGGGTGATACTATGGCGGACGACGATTTCTTCGTGGGTTTGGAGGATCTCGACGATGACGACGCCGGAGATTATTACCCCGATAATTACCCGGAAAATCTGGGTCTTAGTTGGATAACCAACAATTCTACAACAGCCGCCGGCGGTAGCTGA 906 50.66 MEDDWDLQAVVRGYASTTITNYYSTSSAAVSHGSDRSHSDQPPSNFLSHSPPFEPRNDMEGLQQLCDPFFPKSHPRLVSPISALDVRTEQKQITQLQSPRSKRRKNQMKKVCRVTAESLSSSVWAWRKYGQKPIKGSPYPRGYYRCSSSKECLARKQVERDRSDSGMFIVTYTAEHNHPAPTHRNSLAGSTRQKPSTSQTVSGGEQNRSQATQLACFSSSAEDGVVRRSTETERKGEKEDLLEDEEDEQGTWGDTMADDDFFVGLEDLDDDDAGDYYPDNYPENLGLSWITNNSTTAAGGS 301
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 15143673 15144768 - BLOR04256 Blo12g00237 67498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo12g00237 301 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 1 83 IPR044810 GO:0003700
Blo12g00237 301 SUPERFAMILY WRKY DNA-binding domain 119 181 IPR036576 GO:0003700|GO:0006355|GO:0043565
Blo12g00237 301 PANTHER WRKY TRANSCRIPTION FACTOR 22-LIKE 1 83 - -
Blo12g00237 301 PANTHER WRKY TRANSCRIPTION FACTOR 22-LIKE 88 300 - -
Blo12g00237 301 MobiDBLite consensus disorder prediction 178 225 - -
Blo12g00237 301 MobiDBLite consensus disorder prediction 240 257 - -
Blo12g00237 301 ProSiteProfiles WRKY domain profile. 115 181 IPR003657 GO:0003700|GO:0006355|GO:0043565
Blo12g00237 301 MobiDBLite consensus disorder prediction 26 51 - -
Blo12g00237 301 Gene3D WRKY domain 104 174 IPR036576 GO:0003700|GO:0006355|GO:0043565
Blo12g00237 301 MobiDBLite consensus disorder prediction 90 109 - -
Blo12g00237 301 MobiDBLite consensus disorder prediction 26 60 - -
Blo12g00237 301 SMART WRKY_cls 120 180 IPR003657 GO:0003700|GO:0006355|GO:0043565
Blo12g00237 301 Pfam WRKY DNA -binding domain 124 179 IPR003657 GO:0003700|GO:0006355|GO:0043565
Blo12g00237 301 MobiDBLite consensus disorder prediction 174 257 - -
Blo12g00237 301 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 88 300 IPR044810 GO:0003700
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo12g00237 Blo16g00443 CCT
Blo02g00349 Blo12g00237 CCT
Blo12g00237 Blo16g00443 ECH
Blo02g00349 Blo12g00237 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo09g00055 Blo-Chr9:922230 Blo12g00237 Blo-Chr12:15143673 7.53E-48 dispersed
Blo12g00237 Blo-Chr12:15143673 Blo14g00436 Blo-Chr14:5024950 3.54E-40 dispersed
Blo12g00237 Blo-Chr12:15143673 Blo16g00443 Blo-Chr16:17611158 2.13E-96 wgd
Blo12g00237 Blo-Chr12:15143673 Blo02g00349 Blo-Chr2:3682413 2.17E-91 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12981 PF03106 WRKY 2.50E-23 CL0274 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo12g00237 K13425 - vvi:100256849 275.789