Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo12g00252 ATGTCTCAATCAGATCGTTACAGACCTAGATTGGTGATCAAGAAAGTTTTGGCTAAGCTTCAGCCGGAGGGAGATGGTGCTGTTGTTAGGAGAAGCATTGGGAGGGGTGATTTGAAGAACTTGGATCCATTCCTATTGTTGGATGATTTCTCAGTGGGGCCCCCTGCTGGATTTCCAGATCATCCGCACAGAGGATTTGAAACTGTCACATATATGTTACAGGGAGGGATTACCCATCAAGACTTTGCAGGGCACATGGGTACAATCTGGACCGGAGATGTGCAGTGGATGACGGCAGGTAGAGGGATCATCCACTCCGAAATGCCAGCCGGTGAAGGAAGCCAAACTGGCATACAGCTTTGGATCAACTTATCATCCAAAGACAAAATGATTGAACCCAGATATCAAGAGCTCCTCAGCGACGAAATCCCAAGATCGGAAAAAGACGGTGTTGAAGTTCGAGTTATCGCCGGAGAATCAATGGGAGTACAGTCTCCGGTCTACACCAGAACTCCGACGATGTACCTTGATTTTACTCTAAAACCGAGAGCTCAAATGCATCAAAATATCCCTGAATTGTGGAACTCATTTGTGTATATAATTGAAGGAGACGGTGTTTTTGGTACGCCAAATTCATCGCCAGTAGCTGCTCATCACGTTCTCGTCTTGGGGCCCGGAAATGGTTTAAGTGTGTGGAATAGTTCTTCAAAGACTCTAAGATTTGTGTTGATTGCTGGGCAGCCATTGAATGAGTCTGTGGTTCAATATGGACCTTTTGTGATGAACACTCGAAATGAAATTGATCAAGCCATTGAAGACTATCATTACTGCAAAAATGGGTTTGAAATGGCCAAGCACTGGAGATCTCAATGA 873 45.02 MSQSDRYRPRLVIKKVLAKLQPEGDGAVVRRSIGRGDLKNLDPFLLLDDFSVGPPAGFPDHPHRGFETVTYMLQGGITHQDFAGHMGTIWTGDVQWMTAGRGIIHSEMPAGEGSQTGIQLWINLSSKDKMIEPRYQELLSDEIPRSEKDGVEVRVIAGESMGVQSPVYTRTPTMYLDFTLKPRAQMHQNIPELWNSFVYIIEGDGVFGTPNSSPVAAHHVLVLGPGNGLSVWNSSSKTLRFVLIAGQPLNESVVQYGPFVMNTRNEIDQAIEDYHYCKNGFEMAKHWRSQ 290
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 15572944 15574666 + BLOR04271 Blo12g00252 67513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo12g00252 290 PANTHER PIRIN-LIKE PROTEIN 8 290 - -
Blo12g00252 290 SUPERFAMILY RmlC-like cupins 10 288 IPR011051 -
Blo12g00252 290 CDD cupin_pirin_N 27 124 - -
Blo12g00252 290 Pfam Pirin 29 122 IPR003829 -
Blo12g00252 290 Gene3D Jelly Rolls 23 275 IPR014710 -
Blo12g00252 290 PANTHER PIRIN-RELATED 8 290 IPR012093 -
Blo12g00252 290 Pfam Pirin C-terminal cupin domain 175 280 IPR008778 -
Blo12g00252 290 Gene3D Jelly Rolls 144 249 IPR014710 -
Blo12g00252 290 CDD cupin_pirin_C 172 248 - -
Blo12g00252 290 PIRSF Pirin 8 288 IPR012093 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo12g00252 Blo-Chr12:15572944 Blo14g00338 Blo-Chr14:3550239 3.49E-81 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo12g00252 K06911 - pop:7489920 505.368