Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo12g00288 ATGGGTTGTTTTCCTTGTTTTGATTCGAGGGAGGAAGAAAAACTGAATCCGGAGAAAGAAAGTGACGATGGAAAGAGGGCAATACCGACGCTTCCAACTAACATTTCCCGATTGCCTTCTGGAGTGGAGAAATTAAAATTAAGAAGCAATGGTGGGTCCAAAAGAGAAACTCAGGGCTCTAAGGACAGCCCTGGTGTCAATATTGCTGCTCAAATATTTACTTTTCGAGAGCTTGCTTCTGCAACGAAGAATTTCAGACCAGAATGCTTCTTAGGGGAAGGAGGATTCGGCCGAGTGTATAAAGGACAGCTCGAGAGCACTGGTCAGGTCGTTGCAGTTAAACAGTTAGATCGAAATGGTCTTCAAGGGAATCGAGAATTTCTAGTGGAGGTGCTCATGCTTAGCCTTCTTCATCACTCAAACTTAATGAATTTAATTGGTTACTGTGCTGATGGGGATCAGCGGCTTCTTGTTTATGAGTTCATGCCTTTGGGATCATTAGAAGATCATCTTCATGACATCCCACCCGATAAGGAACCCCTAGATTGGAACACGAGAATGAAAATAGCTGCCGGTGCAGCCAAAGGTTTGGAATACCTGCATGACAAAGCAAGCCCTCCCGTTATTTATAGAGATTTCAAGTCGTCCAACATATTGCTAGACGAAGGATTCCATCCGAAACTTTCAGATTTTGGTCTTGCCAAGCTCGGTCCTGTCGGAGATAAATCGCACGTTTCTACTCGAGTTATGGGGACTTACGGCTATTGTGCACCTGAATACGCAATGACTGGACAACTCACGGTCAAATCAGATGTCTACAGCTTCGGTGTAGTCTTCTTGGAGCTTATTACTGGCCGGAAAGCAATCGATAGCACCCGACCCCACGGAGAACAGAATCTCGTCACTTGGGCAAGGCCTTTGTTCAATGACAGAAGAAAATTTTCGAAACTGGCTGACCCTCTGTTGCAGGGGAGGTATCCGATGCGGGGGCTCTACCAGGCTCTGGCAGTAGCGTCTATGTGCATCCAAGAGCAGGCAGCCTCACGACCTTTAATTGGAGATGTTGTTACGGCCCTTTCTTACCTAGCCAACCAGGCATACGATGGGAGTAGTGGGTACAGAGGGATTGGTGATAAGGACGACAAGAGATGTAGAGACGAAAGAGGGAGGATATTGAAGAACGAGGAAGGAGGTGGCTCTGGACGCAAATGGGATTTGGACGGATCCGAGAAAGAAGACTCCCCGAGAGAGGTAGGGAGGATTACAACGAGGGATTTGGAGAGAGAACGGGCCGTTGCTGAGGCCAAGATGTGGGGGGAGAATTGGCGAGAAAAGAGAAGGCAAAGTGCACAAGGCAATTTCGAGGGGCCGAATGGATAG 1380 47.61 MGCFPCFDSREEEKLNPEKESDDGKRAIPTLPTNISRLPSGVEKLKLRSNGGSKRETQGSKDSPGVNIAAQIFTFRELASATKNFRPECFLGEGGFGRVYKGQLESTGQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHSNLMNLIGYCADGDQRLLVYEFMPLGSLEDHLHDIPPDKEPLDWNTRMKIAAGAAKGLEYLHDKASPPVIYRDFKSSNILLDEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDSTRPHGEQNLVTWARPLFNDRRKFSKLADPLLQGRYPMRGLYQALAVASMCIQEQAASRPLIGDVVTALSYLANQAYDGSSGYRGIGDKDDKRCRDERGRILKNEEGGGSGRKWDLDGSEKEDSPREVGRITTRDLERERAVAEAKMWGENWREKRRQSAQGNFEGPNG 459
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 17085939 17088765 + BLOR04307 Blo12g00288 67549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo12g00288 459 PANTHER OS07G0668900 PROTEIN 1 453 - -
Blo12g00288 459 SUPERFAMILY Protein kinase-like (PK-like) 63 359 IPR011009 -
Blo12g00288 459 MobiDBLite consensus disorder prediction 7 26 - -
Blo12g00288 459 Gene3D Transferase(Phosphotransferase) domain 1 162 373 - -
Blo12g00288 459 MobiDBLite consensus disorder prediction 388 459 - -
Blo12g00288 459 MobiDBLite consensus disorder prediction 388 450 - -
Blo12g00288 459 CDD STKc_IRAK 91 359 - -
Blo12g00288 459 ProSiteProfiles Protein kinase domain profile. 85 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo12g00288 459 PANTHER SERINE/THREONINE-PROTEIN KINASE PBS1 1 453 - -
Blo12g00288 459 ProSitePatterns Serine/Threonine protein kinases active-site signature. 208 220 IPR008271 GO:0004672|GO:0006468
Blo12g00288 459 Gene3D Phosphorylase Kinase; domain 1 70 161 - -
Blo12g00288 459 ProSitePatterns Protein kinases ATP-binding region signature. 91 114 IPR017441 GO:0005524
Blo12g00288 459 Pfam Protein kinase domain 90 293 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo12g00288 459 MobiDBLite consensus disorder prediction 1 39 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00584 Blo-Chr2:10803319 Blo12g00288 Blo-Chr12:17085939 0 dispersed
Blo03g01259 Blo-Chr3:38815338 Blo12g00288 Blo-Chr12:17085939 2.08E-173 dispersed
Blo06g00366 Blo-Chr6:21673337 Blo12g00288 Blo-Chr12:17085939 9.30E-176 dispersed
Blo07g00911 Blo-Chr7:28059265 Blo12g00288 Blo-Chr12:17085939 8.25E-174 dispersed
Blo08g00343 Blo-Chr8:5295649 Blo12g00288 Blo-Chr12:17085939 9.39E-98 dispersed
Blo10g00819 Blo-Chr10:25932028 Blo12g00288 Blo-Chr12:17085939 7.82E-171 dispersed
Blo12g00288 Blo-Chr12:17085939 Blo14g00145 Blo-Chr14:1084249 1.98E-170 dispersed
Blo12g00852 Blo-Chr12:26794248 Blo12g00288 Blo-Chr12:17085939 1.90E-161 dispersed
Blo13g00350 Blo-Chr13:20616616 Blo12g00288 Blo-Chr12:17085939 4.39E-110 dispersed
Blo16g01150 Blo-Chr16:40032809 Blo12g00288 Blo-Chr12:17085939 5.60E-85 dispersed
Blo12g00288 Blo-Chr12:17085939 Blo07g00186 Blo-Chr7:2334385 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84566 PF00069 Pkinase 3.40E-43 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo12g00288 K13430 - pvy:116140735 823.157