Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo12g00314 ATGGAACAAATCACATCAAACGACCGATCGCTTCCACCGCCTTTTCTCTCCAAAGATCTCCATCCATATCCCTATCATCAATTTCAAAACCCCCAGCACAATTATTCCGATGAGAAATTTTCTGGTGGCGAAAGCAAAGAGCTTGGCGGAAGTGACGCCGGAGACGGAGAGATTATCAAAAGATCACGCGGCCGACCAGCTGGTTCTAAGAACAAGCCAAAGCCACCGATTGTAATCACGCGTGACAGTGCAAACGCTCTCCGATCACAGGTCATGGAGATAGCTGCCGGTTCCGACGTGGTGGAGACGATGTCAGAGTTCGCCCGCCGGAGGCAGCGGGGGGTTTGTATTTTGAGCGGAGGTGGAACAGTAAGCGACGTCACTTTGAGGCAGCCGGCTGTTACTTTACGCGGTGAATTCGAGATTCTTTCTTTGTCAGGATCGTTTTTGCCTCCGCCGGCTCCTGCCGCGGCCTCCGGACTAGCTGTGTATTTGGCAGGTGGACAAGGGCGGGTGGTCGGAGGGTGTGTCGTCGGGCCACTTTTAGCTTCCACCCCGGTTGTAATAATGGCGGCCACTTTTGGAAACGCTGCATACGAGAGGCTTCCAATAGAAGAAGATGAATCGCCGATGAAAATCCAGGAGTGCAATCCCGTGGGAAAAGGGCGGCAGCAGCAGCAGCAAAATTTACTAGATCCGAACACTTCTCTATTTCATAGCGTTCATCAGAATCTTCTAAATCCATGTGAATTACCTTCTGAAGCATTCTTGCTCACAAATCGCCCTTCCTATTAG 795 51.19 MEQITSNDRSLPPPFLSKDLHPYPYHQFQNPQHNYSDEKFSGGESKELGGSDAGDGEIIKRSRGRPAGSKNKPKPPIVITRDSANALRSQVMEIAAGSDVVETMSEFARRRQRGVCILSGGGTVSDVTLRQPAVTLRGEFEILSLSGSFLPPPAPAAASGLAVYLAGGQGRVVGGCVVGPLLASTPVVIMAATFGNAAYERLPIEEDESPMKIQECNPVGKGRQQQQQNLLDPNTSLFHSVHQNLLNPCELPSEAFLLTNRPSY 264
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 18512274 18513068 - BLOR04333 Blo12g00314 67575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo12g00314 264 Pfam Plants and Prokaryotes Conserved (PCC) domain 90 194 IPR005175 -
Blo12g00314 264 Gene3D - 88 215 - -
Blo12g00314 264 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 40 264 IPR014476 GO:0003680
Blo12g00314 264 SUPERFAMILY AF0104/ALDC/Ptd012-like 84 208 - -
Blo12g00314 264 MobiDBLite consensus disorder prediction 1 79 - -
Blo12g00314 264 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 18 40 264 - -
Blo12g00314 264 MobiDBLite consensus disorder prediction 39 64 - -
Blo12g00314 264 ProSiteProfiles PPC domain profile profile. 84 217 IPR005175 -
Blo12g00314 264 CDD DUF296 91 150 IPR005175 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo12g00314 Blo-Chr12:18512274 Blo19g00297 Blo-Chr19:18628750 1.56E-69 dispersed
Blo12g00314 Blo-Chr12:18512274 Blo03g00383 Blo-Chr3:9086916 4.01E-82 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo12g00314 - - jre:108980480 316.235