Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo12g00317 ATGACTATGGCGATGCTCGAGAGCATTGTCGTTGTCGTCCCCCTTATGCTGCTTCTGATTCTCATCATCATCCTCTTTGCCTGCAAGCCATGGCGCTTTCTTTCCTCTTCTCGTTCGCGTACGCTCAAGGCCTCTGACCTTGAGAGGCCCCTTGTTTCGGACAATGTGGACCCTCAAGATCAAAGCAACGAACTTCCAAGAGATTATGATTTGGAGGGAGCTTTTCAATCTGATGTGCATTACCGCTCCCCTGGAGCTCATGGACTCATTTACAAACAAAGGCTTCCAGCTGCATCTCCAGATGTATATGCAGATTCTTTAGAAGACATTTCTGTTGGCCAGACACTTAAACGTCCATATGATGCACACCAGATTTCAGAAATCCAAAGAGCTAGTAAGAGTGTTGGAAATGAAAAATCTCAAGAGTCTTTGGGAAAGGACATCTTACACCAAAGAAGTTGCATTTCTTTGGAGGTCATTTCTGGTCCTTCTCGCGGACTTAGATCTTTCATACATTCAACAAGTACCTCTAGGCTTCCACTAACTCTTGGAAGGGTTTCTCCCAGTGATATTGTACTAAAGGATTCAGAGGTCTCAGGGAAGCATGCATTGATAAATTGGAATTTAAATAAAATGAAATGGGAGCTGTTAGACATGGGTAGCCTGAACGGAACATTGCTTAATTCTCAACCGATACACCGTCCTGACTCTGGAAGTAGGCATTGGAGTGATCCTACTGAACTTGCGAGTGGAGATATAATAACACTTGGTACAACCTCAAAAATATATATTCATATAACTTCTCAAACAGAGGGTATAATTCCATTTGGAGTTGGTGTGGCATCTGATCCCATGGCTATGCGTCGTGGAGGAAAGAAATTGGTCATGGAAGATGTCTTTTATTATAAGTGGCCTCTTCCTGGAGTCAATCAGTTGGGAATTTTTGGGATTTGTGATGGGCATGGTGGATCAGCAGCTTCCAAAAGTGCTAGCGAAATTCTACCTGAGATGGTTGCGACTATTTTATCTGATCCTCTAAAAAGGGAACGGGTGTTTTCCCTATGTGACGCTTCTGATGTTTTAAGGGATGCATTTTCTCAGACAGAAGCGTGCATGAATCACCACTATGAGGGTTGTACCGCAACCGTGCTTCTGGTAGGGGTGGATGGTAATGATAATTACTTTGTGCAATGCGCAAATGTTGGTGATTCTGCTTGTTTAATGTTATTTTACTGTGTCAGTGTTGATGGGAAACAAGTAAAGATGACTGAAGATCATAGAGTTACTAGCTACTCAGAACGACAACGAATTGAAAAATTAGGAGATCCATTGAAAGATGGGGAGACGAGATTATGTGGTTTGAACCTTGCACGGATGCTTGGAGACAAATTTCTGAAACAACAGGATAATCGCTTCAGTTCAGAGCCTTACATAAGTCAAGTTGTACATATTAACCAAGCAAGCAGGGCATTTGCACTTATGGCAAGTGATGGCTTTTGGGGTGTCATCAGCGTCAAGAAGGCCACCCAGCTAGTTCTTCAGGCTCAGGAGAGATACTCTACAGATTCAGAAAATTTGGCGGAGAAGATAGCTAATTTTTTGTTGGCCGAGGCTAGAATGCTGCGAACAAAGGATAATACCACTATAATTTACTTAGATTTTGACTCCTCTCATAGAATCCCTTGTAAAGTTGAATCATAA 1701 42.45 MTMAMLESIVVVVPLMLLLILIIILFACKPWRFLSSSRSRTLKASDLERPLVSDNVDPQDQSNELPRDYDLEGAFQSDVHYRSPGAHGLIYKQRLPAASPDVYADSLEDISVGQTLKRPYDAHQISEIQRASKSVGNEKSQESLGKDILHQRSCISLEVISGPSRGLRSFIHSTSTSRLPLTLGRVSPSDIVLKDSEVSGKHALINWNLNKMKWELLDMGSLNGTLLNSQPIHRPDSGSRHWSDPTELASGDIITLGTTSKIYIHITSQTEGIIPFGVGVASDPMAMRRGGKKLVMEDVFYYKWPLPGVNQLGIFGICDGHGGSAASKSASEILPEMVATILSDPLKRERVFSLCDASDVLRDAFSQTEACMNHHYEGCTATVLLVGVDGNDNYFVQCANVGDSACLMLFYCVSVDGKQVKMTEDHRVTSYSERQRIEKLGDPLKDGETRLCGLNLARMLGDKFLKQQDNRFSSEPYISQVVHINQASRAFALMASDGFWGVISVKKATQLVLQAQERYSTDSENLAEKIANFLLAEARMLRTKDNTTIIYLDFDSSHRIPCKVES 566
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 18627616 18635391 + BLOR04336 Blo12g00317 67578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo12g00317 566 CDD PP2Cc 276 554 IPR001932 -
Blo12g00317 566 CDD FHA 157 268 IPR000253 GO:0005515
Blo12g00317 566 SUPERFAMILY PP2C-like 290 555 IPR036457 -
Blo12g00317 566 SMART PP2C_4 271 552 IPR001932 -
Blo12g00317 566 ProSiteProfiles Forkhead-associated (FHA) domain profile. 181 232 IPR000253 GO:0005515
Blo12g00317 566 PANTHER PROTEIN PHOSPHATASE 2C 70 34 565 - -
Blo12g00317 566 Pfam FHA domain 182 257 IPR000253 GO:0005515
Blo12g00317 566 SUPERFAMILY SMAD/FHA domain 154 265 IPR008984 GO:0005515
Blo12g00317 566 Gene3D - 149 281 - -
Blo12g00317 566 ProSiteProfiles PPM-type phosphatase domain profile. 277 554 IPR001932 -
Blo12g00317 566 PANTHER PROTEIN PHOSPHATASE 2C 34 565 IPR015655 GO:0004722|GO:0006470
Blo12g00317 566 Gene3D - 282 560 IPR036457 -
Blo12g00317 566 ProSitePatterns PPM-type phosphatase domain signature. 314 322 IPR000222 GO:0043169
Blo12g00317 566 Pfam Protein phosphatase 2C 286 546 IPR001932 -
Blo12g00317 566 SMART FHA_2 180 232 IPR000253 GO:0005515
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo01g00131 Blo12g00317 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo12g00317 Blo-Chr12:18627616 Blo12g01039 Blo-Chr12:28238832 7.36E-19 dispersed
Blo01g00131 Blo-Chr1:1790226 Blo12g00317 Blo-Chr12:18627616 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo12g00317 K01090 - jre:109005870 788.489