Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo12g00322 | ATGAAAGACACAAAGAGGTGTCGTTTTGGAGAGAAGATATGTTTCCCCAAGGCGGACTTTTCTATTTATTCGTTGCCAAGGGCAAATGGAACTTTAGATTTACTGTCAATTCAGGACGAGGAAACGGACACAGCCATTGAAAGTGGGGAATCGAGAGACTCTGACACGGCTCTAGTCAGCTCCGATTCTCTCTCTCTCTCTCTAGCATGTCCAAATTTATACTTTTCGTCGAATTTACGGAAGTCTGTGTGCTTTGAGTCTCTGAATCCTGATATTGGAATTACAGCGGCAGTCTCAAATCGTTGGCGAGGTTTTGATCTGAGCAAATTTATTATGTTAGCGAATCACCTACAAAATGGGATCGAGACAGCGAAGCTTGTCTGGTCTCGTCTTCCGGAGTCGGAAGACGGGGAACTCGATGAGGTTGGAATCTCGAAGAAGAGCGATGGATGTAGCGTGGAGAGTCTCGATTACGAGGTTATTGAGAATTATGCCTATTGGGAGGAGCAGTCTCAGCGTGGAAGACTTTTGGCTGGTTATTATGTAGTGGTTAAGTGGCTCTTTGCGTTGCTCATTGGCATCGGTACTGGGTTAGCTGCAGTTTTTATAAATATTTCTGTCGAGAACTTTGCTGGATGGAAGTTTGCATTGACATTTTCCATTATACAAAAATCGTATTTTGCCGGCTTTCTTGTATATGTATTGATCAACCTTGTTTTGGTCTTTTCCTCTGTATATATCATCACACATTTTGCACCAGCTGCAGCTGGATCTGGTATACCTGAAATAAAGGGCTATCTAAATGGTGTTGATATTCATGGTGTTCTTTTCTTCAGAACCCTAATTGGAAAGATATTTGGAAGCATTGGGTCGGTAGGAGGGGGCTTGGCTTTAGGCAAAGAAGGTCCTCTTGTTCATACTGGTGCTTGTATTGCTTCTTTACTCGGACAAGGTGGATCAACGAAATATCATCTGAGTTCTAGGTGGTTGCAAGTATTTAAAAGTGACCGAGATCGCCGTGATCTTGTGACCTGTGGATGTGCAGCAGGAGTTGCTGCAGCTTTTAGAGCTCCAGTCGGTGGTGTATTATTTGCCTTGGAAGAAGTTACATCCTGGTGGAGGAGTCAGCTTATGTGGCGTGTATTTTTTACTTCTGCTATTGTTGCTGTTGTTGTCCGAACAGCAATGGGATGGTGTAAAAGTGGAAAGTGTGGACATTTCGGTTCTGGTGGCTTCATAATATGGGATATATCAGATGGTCAAGAGGACTACTCTTTTGGAGAGTTGTTGCCAATGGCTGTTATTGGGGTCATTGGAGGCTTATTGGGTGCGTTATTCAACCAGCTTACTCTTTACATAACTTACTGGCGCAGGAATTTTTTACACAAGAAAGGAAACAGAGTCAAGATAATTGAGGCATGTATTATCTCCTTTGTCACGTCAATTATTTCTTTTGGGCTACCACTTTTGAGAAAATGCAGCCCATGCCCAGTAGTAGATGCTGATTCTGGTATTGAATGCCCAATGCCTCCGGGAGTGTATGGAAATTATGTAAATTTTTACTGCAGTAAGGACGATGAGTACAATGACCTAGCAACGATTTTCTTTAACACACAGGATGATGCGATAAGGAATTTGTTCAGAGCCAAAACCTTTCACGAGTTCAGCGCCCAAAGTTTATTGACATTTTTGGTCATGTTTTATTCTCTAGCTGTTGTGACATATGGCACTGCTGTTCCTGCTGGCCAATTTGTACCCGGTATAATGATTGGATCGACATATGGACGTTTAGTTGGCAAGTTGGTTGTTAATTTTTACCAGAAGCCCAACATTGAAGAGGGAACATATGCTCTTTTGGGAGCTGCTTCTTTTCTTGGAGGTTCAATGCGGATGACTGTGTCCTTGTGTGTAATAATGGTTGAAATCACGAACAATTTGAAACTTCTACCACTTATCATGCTTGTTCTTCTTATCTCAAAGGCTGTTGGAGACACTTTCAACGAAGGACTATATGAGGAACAAGCACAATTGAAGGGAATTCCATTACTGGAGTCTAGACCAAAGTATCAGATGAGGAAGATTGCTGCGAAAGAGGCCTGTGGAAGAAGGGTCATCTCCTTTCCACGTGTTGTGAAGGTTGCAGACATGGTTGAGATTTTGAAAAGCAACAAACATAATGGATTCCCTGTGATAGATCATGGAAGAAATGGGGAAGCACTTGTGATTGGACTCGTTCTTCGAAGTCATCTTTTGGGGCTTCTTCTGTCGAAGGAAGATTTCCAGCATAGTCCACTACCTTCCGATCAAAGGGGATCCAGGCCAATCAGGCATAATTTGAGTGAGTTTGTGAAACCTGCTTCCAGTAAAGGCTTATCTATAGATGATATACATCTAAGCTCAGATGACTCTGAAATGTACATAGATCTTTTCCCATTTTTGAATCCCTCTCCATACATCGTTCCAGAAGATATGTCTTTGACAAAGGTATATAATCTTTTCAGGCAACTAGGTCTAAGACACATATTTGTTGTCCCTCGTCCTTCTCGCGTTGTTGGTTTAATTACAAGGAAGGATTTGTTGATTGAGGATAATGACGATTCAGACACAGTGGAACTCCAATCGACCAGTGTAAGGTCTCTATGA | 2643 | 42.19 | MKDTKRCRFGEKICFPKADFSIYSLPRANGTLDLLSIQDEETDTAIESGESRDSDTALVSSDSLSLSLACPNLYFSSNLRKSVCFESLNPDIGITAAVSNRWRGFDLSKFIMLANHLQNGIETAKLVWSRLPESEDGELDEVGISKKSDGCSVESLDYEVIENYAYWEEQSQRGRLLAGYYVVVKWLFALLIGIGTGLAAVFINISVENFAGWKFALTFSIIQKSYFAGFLVYVLINLVLVFSSVYIITHFAPAAAGSGIPEIKGYLNGVDIHGVLFFRTLIGKIFGSIGSVGGGLALGKEGPLVHTGACIASLLGQGGSTKYHLSSRWLQVFKSDRDRRDLVTCGCAAGVAAAFRAPVGGVLFALEEVTSWWRSQLMWRVFFTSAIVAVVVRTAMGWCKSGKCGHFGSGGFIIWDISDGQEDYSFGELLPMAVIGVIGGLLGALFNQLTLYITYWRRNFLHKKGNRVKIIEACIISFVTSIISFGLPLLRKCSPCPVVDADSGIECPMPPGVYGNYVNFYCSKDDEYNDLATIFFNTQDDAIRNLFRAKTFHEFSAQSLLTFLVMFYSLAVVTYGTAVPAGQFVPGIMIGSTYGRLVGKLVVNFYQKPNIEEGTYALLGAASFLGGSMRMTVSLCVIMVEITNNLKLLPLIMLVLLISKAVGDTFNEGLYEEQAQLKGIPLLESRPKYQMRKIAAKEACGRRVISFPRVVKVADMVEILKSNKHNGFPVIDHGRNGEALVIGLVLRSHLLGLLLSKEDFQHSPLPSDQRGSRPIRHNLSEFVKPASSKGLSIDDIHLSSDDSEMYIDLFPFLNPSPYIVPEDMSLTKVYNLFRQLGLRHIFVVPRPSRVVGLITRKDLLIEDNDDSDTVELQSTSVRSL | 880 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 18725555 | 18734213 | + | BLOR04341 | Blo12g00322 | 67583 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo12g00322 | 880 | CDD | CBS_pair_voltage-gated_CLC_euk_bac | 704 | 860 | - | - | |
Blo12g00322 | 880 | Gene3D | - | 685 | 866 | IPR046342 | - | |
Blo12g00322 | 880 | CDD | ClC_6_like | 154 | 683 | - | - | |
Blo12g00322 | 880 | PRINTS | Plant CLC chloride channel signature | 159 | 167 | IPR002251 | GO:0005247|GO:0006821|GO:0016020 | |
Blo12g00322 | 880 | PRINTS | Plant CLC chloride channel signature | 369 | 377 | IPR002251 | GO:0005247|GO:0006821|GO:0016020 | |
Blo12g00322 | 880 | PRINTS | Plant CLC chloride channel signature | 401 | 408 | IPR002251 | GO:0005247|GO:0006821|GO:0016020 | |
Blo12g00322 | 880 | PRINTS | Plant CLC chloride channel signature | 383 | 393 | IPR002251 | GO:0005247|GO:0006821|GO:0016020 | |
Blo12g00322 | 880 | PRINTS | Plant CLC chloride channel signature | 531 | 547 | IPR002251 | GO:0005247|GO:0006821|GO:0016020 | |
Blo12g00322 | 880 | Pfam | CBS domain | 700 | 755 | IPR000644 | - | |
Blo12g00322 | 880 | Pfam | CBS domain | 814 | 860 | IPR000644 | - | |
Blo12g00322 | 880 | Pfam | Voltage gated chloride channel | 241 | 663 | IPR001807 | GO:0005247|GO:0006821|GO:0016020|GO:0055085 | |
Blo12g00322 | 880 | ProSiteProfiles | CBS domain profile. | 813 | 869 | IPR000644 | - | |
Blo12g00322 | 880 | PRINTS | Chloride channel signature | 348 | 367 | IPR001807 | GO:0005247|GO:0006821|GO:0016020|GO:0055085 | |
Blo12g00322 | 880 | PRINTS | Chloride channel signature | 614 | 630 | IPR001807 | GO:0005247|GO:0006821|GO:0016020|GO:0055085 | |
Blo12g00322 | 880 | PRINTS | Chloride channel signature | 579 | 599 | IPR001807 | GO:0005247|GO:0006821|GO:0016020|GO:0055085 | |
Blo12g00322 | 880 | PRINTS | Chloride channel signature | 670 | 684 | IPR001807 | GO:0005247|GO:0006821|GO:0016020|GO:0055085 | |
Blo12g00322 | 880 | PRINTS | Chloride channel signature | 253 | 270 | IPR001807 | GO:0005247|GO:0006821|GO:0016020|GO:0055085 | |
Blo12g00322 | 880 | PRINTS | Chloride channel signature | 284 | 303 | IPR001807 | GO:0005247|GO:0006821|GO:0016020|GO:0055085 | |
Blo12g00322 | 880 | PRINTS | Chloride channel signature | 632 | 651 | IPR001807 | GO:0005247|GO:0006821|GO:0016020|GO:0055085 | |
Blo12g00322 | 880 | SUPERFAMILY | Clc chloride channel | 163 | 685 | IPR014743 | - | |
Blo12g00322 | 880 | SUPERFAMILY | CBS-domain pair | 689 | 860 | IPR046342 | - | |
Blo12g00322 | 880 | PANTHER | CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER | 115 | 879 | - | - | |
Blo12g00322 | 880 | SMART | cbs_1 | 703 | 755 | IPR000644 | - | |
Blo12g00322 | 880 | SMART | cbs_1 | 816 | 864 | IPR000644 | - | |
Blo12g00322 | 880 | Gene3D | Clc chloride channel | 178 | 684 | - | - | |
Blo12g00322 | 880 | PANTHER | CHLORIDE CHANNEL PROTEIN CLC-D | 115 | 879 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo12g00322 | Blo-Chr12:18725555 | Blo16g00894 | Blo-Chr16:36620751 | 0 | dispersed | |
Blo12g00322 | Blo-Chr12:18725555 | Blo02g01193 | Blo-Chr2:43656855 | 0 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo12g00322 | K05016 | - | jre:109005860 | 1324.3 |