Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo12g00324 ATGGATAGAAACAGAGAAGCGAGGAGGTCGACCATGGCGGCCACGAACGGATTATCTAAACGTAGACACAGAACTACCAGTCACAGAGAATCCCCTGAGGAAGACGTGGTGGTTGAGTTGCAGGAGACTGCGAGGCTAAGAGATCGAGGAACTGGGAAGAAAGACCGACAGAGGGAGCGGCTTAGCCGGAGCAGAAGGAGGAGAGCCGACAGATTAATGCATGGAAGTAATAAGGAAGACGCTGGGGAAGAGAGTTCAGAGGAGAGTGTAAATGACGAAGAAGATGAGGATGACGAAGACTGTGGAGGTTCAGTCAGGATGCTTCCTCCGAACCCTTCGTTGATGACGTCGATTTCTAATCACCGAAAGAGCTGTCCTCTGTCGAAGACCTTTCGAACCGCCGCATCGTGGAAAGCAGCCGACGAAATGATCGGGGTGTCAGTTCCTAGAAAAGCACGCTCAGCATCTACGAAGAGGTCTCACGACTCTTGGACTCCGACCGCCGGGGTTGGTGCCGCAGAGCTGATTCACCGTCAGTCTTCGACATCTCCTGTGAGACCAAGCGTCGGTTCAGCAACGGCGTCTCTAACTCCGGCGTCTCCTTCTTCCTCTAATGCTTCGGCGAGGAAGAAGCCGAAGTCGAACGGACCGAAACTGAGGCCGCCAAAATCATCGTCTAAGTCTTATTTGGCTCAGGACGAAATCGAGATCGAAATTGCGGAAGTGTTGTACGGAATGATGAGACAGCCGCAAGGGCCTTCTAAGCCGGAAATCTTAGCTAGTGATTCTTTGAAGTTTGATTCAAGAGAGGTGAACAAAACGACGTCGGACTCTAAATCTAGGGTTTCTTCGCCGATCTCAAACTCGTCCTCTGCTTTACCACTTCCGTCGTCAATTCTGACTCAGAATTCCGTTTCAACCATTACTTCTGTATCTGCAATGGCACCTAAGAGAAAAAGACCTCGACCGATCAAGTATGACGACGAGTACCCCTCAATTTTCAGCGGGAGGAATGGCCCCATTTTCTCGACAACCAAACCAGAGGATGACCATGCAGCGAAAACGGAGATTTCTCCCTATAGTTTCAAGAAATCTTCAGGATTTTTAGCTGAAAATGGCAGAGTTGCAGTTAGTACCGGAAGTTCTCAAGTTACACTGTCCTCGTCGGAGGTGCAGATCGAACATATCAAGCCTGAAAGTTACGTTTTGTCAGATTCAAATCATTTGGTTGCAGAATCAAATGGGAAAGATTTGGGTGTGTCAAAGGAGGAGCCTCAATCGCCCAAAAATGAAACTTTAATCCCCATTTTGAATCATAATAATCCAGATGAGAAGATTCCGACCAAACCGCATTCATCAATGGTGGAATGTGAAAATCAAAGAGAAGAGAAGTTTCAGATAGATCTGATGGCTCCTCCTCCATTCCGATCATCACCGGAAAGAAATGTTGAGACCCATTTTGTGGCTGTAGATCCGAAATCTATGGTTACTGAAGCAGAAATGGAAACAACTATGGCCAAGATAAAGGAAGACGAAAAAGCAGCAAAAATAGGAAAAGGAGAGGGAGGGAAGGCAGAGTCCAAAGCTAAATCTGACGATGCTGATTCTAGAAATCATCCCGTTATTATTAGTAAAGAGAAGAACATCGATCTTCCTCTTGATTTGGAGAAAACTGAAAGAGATGGTGGCTATGGAGGTTTAAGCAATAATAAGCTAAACAGGCTTGCTCAGAAGCAGCAGCAACCTTCAATTTCAGACAAAGCTGGCCAAGCTAATTCTCTTCCTTTGCCCATGTCTGTTACTGGTTGGCCAACTGGACTTCCTCCCATGGGATACGTGACTCCTCTGCAAGGTGTTGTACCCATTGATGGGAGCTCTGTTACATCTACGGCTATGCAACCTCCGAGTTTACTTTTCCCTCAGCCCCGGCCAAAGAGATGTGCCACCCATTGCTACGTTGCTAGAAACATTTGTTATCATCAACAAATTGCAAGGTTGAATCCGTTCTGGCCGTCTCTTACCGGCTCTGCATCGATGTTTGGGGCCAAGCACTGTATTTCGAATGGCTTACCCACTTCAGATTTTCATGGAAATCTTTCAGGTAAAAACGTGAATTCTTTGCAGGAGAATGCCCAGAGTCTTCCCATTTTTTCTGCTCAATCTGCAAAAGATAATAAGCCTCCTCAATTTTCTGCCATTGACGATGTTTCTCAGAGAAAGCAAATTCTAGTTCAGCAATCTTTACCTCCAGGAGCTCCTAATAATATCTTGCAGGGTCCGGCTTTTATCTTTCCGTTGAGTCAACAACGGGCTGTGGCTGCTGCCTCTGTCCGACCTGCTGGTGCAGTAAAGTCTCCAACCAGTGGCACTGTTTCCTCTGCTGCCTCTGTTTCATCTTCAGTGAGTGGGTCTGCCAAAGCCGCCATTGCAGGGCCTACTATGAGCTTCAATTATCCTAATGTGCCCACCAACGAGACTCAGTACTTAGCCATCTTGCAGAACAACGGATATTCATTTCCGATCCCAGCACATGTTGGTGCGCTACCTGGATATAGAGGAGCTCATCCTCCGGCCATGCCCTTTTTTAATGGCTCCTTCTATTCTTCTCAAATGATTCATCCTCCACCTTCAGCTCAGCCGCAGCTGAGCCAACAAGGTCCGCCAAGTTCCACCATTCCTGGCTGTGCCTCTTTGAATCAAAAACATTTACAGAGCCAGCAGTCAAGATCACATGCTAGTGGCAGCTATGGTGGTGGTGGTGGTGGAAATTTACAGGGCTTTGCATCCAAAAACCATTCTTCTCACCCATTGCAGCTTCAGCAAGCTCAGCCTCGCCAACTTGAAACTGAAATTGGTGGAGAAGAAAGCCCATCAACACCTGATAGTCGGGTTTATCGATCGAATATCAATGTCTATGGTCAGAATTTTGCCATGCCGATTTACTCACCACCGAAATTATCTTCTATCAATCCTCCTGTCCCAATTGCCAGAGGTGGTGAAAAGAAGCATTCTCAACCACAGGGTGGCTCAAAAACCGGAGTTGAACCATCTCATGCTTTTGCCTCCATTAATGGTGTTTCCATCACCCCCGGTATTGCGCCAAATCATCTGATGTTCCAGAACCTTCCAGAAGTAGTTACAAGAGACGGGTATCAGATCATGGCTTCAGCTGGCGCAGCCCAAGTTGCACAGCAGAAGAAAAGCTATCTAGACGGGAACACCATGGGTGGCGATAATTCTTCAAATGTAGAGGAAGATAGAAAACCTTCGGCCGGCAAAACTCCAGCTCCGCCAATTGGTCAGTCCATTGCCTTCTCCAGAGCAGAATTATCCGATACATCTGTCTCCACCATTCCTGGTGGGACTGCCATGGTGGATAGTTCAGGTCGAAGGCCTTCTGGGTCTGTTATGCCACAAATGCCGCCTGTGATTAGCCCTCCCAACACCTCCAATTCGCAGCAGCAAATGCAGAGGAATCAGCAGCACCTGATGCTTCAGAAACAGCAGCAATTTGCTGCGGCTGCAGCTGCTGCTGCAGCACGAAACAAGACGCCACCCACAAGTAATGGTGGTGGAGTTTATTCTGATCACCTTCCATCTCCGTCTTCAATGGCTGCCAAGTTTCCTAATGCTTTAACTTCTTTTTCACAAAATATAGTCCAGAGTAACAGCACCACTAGTCCAGCTCAATCTCCTCAATGGAAGAATTCAGCGAGGGCAACAACGACTTCTCAGGTTCCTACTCAGTCTGTTTCCTCAACTGCATCTTCCACAAAAACTTTCTCTCAACAACCCAATCGACCCCAGCAAAGCCACACGCAGATTTCTTTTGCAGCAAATCCTAAATCATCTTTACAAAATCAAGCACAACAATCTGTGAGCAATCAAACTCCATCGCCTCCATTAGTGGTAGGCTCTCCAACCTCTTCCATCTCAAAAAGTGCAGGTGGGAGCTCGAGATTGGCTAGTTTGACACCCACGGGAAACAAAACTGGCCAAGCTTCCATGGCATCTCAGCAAATCAAGAATTCCCAACCATTGCCAACCCAGAAGTCGATCCTCGGAAATCCTGTCACCTCTTCATCAAGCTCTGTAAGCAAGACCCAGTTGGCCCAGCAACAGCATCTATCAAAGCAATCATTACAACAAGCACAACTCTTCTTTTCTCACCCATATATGCAGGCCCAAGCTTCTCATTCCACTAGTCCTTCATCTCCCTCAGCAGGTAGTGGATATTATCTTCAAAGACGCAGGGCAGAGCCACAACCGGCTGCACATGGCCAACCATCATCGACAAGTGCAATGTTATCATTATCGCCCATCACACTAGATCCTGCAAAAGTAGTGGCTGTAGCTTCAGCCGAGAGCAATGTAAAATCCGGTAGTGGTTTGTCATCTCCAGCTATACTCCACCCTGCCCAGTATGCTGCTTCATATTCACCAGGGATGCCTGCCGGTTTCCCATATATTCATGCTGTTTCAACTGCAGCCGTTCAGGTGAAGCCAGCGGAGCAAAAACAACCTGCGGGTGAGTAG 4536 47.46 MDRNREARRSTMAATNGLSKRRHRTTSHRESPEEDVVVELQETARLRDRGTGKKDRQRERLSRSRRRRADRLMHGSNKEDAGEESSEESVNDEEDEDDEDCGGSVRMLPPNPSLMTSISNHRKSCPLSKTFRTAASWKAADEMIGVSVPRKARSASTKRSHDSWTPTAGVGAAELIHRQSSTSPVRPSVGSATASLTPASPSSSNASARKKPKSNGPKLRPPKSSSKSYLAQDEIEIEIAEVLYGMMRQPQGPSKPEILASDSLKFDSREVNKTTSDSKSRVSSPISNSSSALPLPSSILTQNSVSTITSVSAMAPKRKRPRPIKYDDEYPSIFSGRNGPIFSTTKPEDDHAAKTEISPYSFKKSSGFLAENGRVAVSTGSSQVTLSSSEVQIEHIKPESYVLSDSNHLVAESNGKDLGVSKEEPQSPKNETLIPILNHNNPDEKIPTKPHSSMVECENQREEKFQIDLMAPPPFRSSPERNVETHFVAVDPKSMVTEAEMETTMAKIKEDEKAAKIGKGEGGKAESKAKSDDADSRNHPVIISKEKNIDLPLDLEKTERDGGYGGLSNNKLNRLAQKQQQPSISDKAGQANSLPLPMSVTGWPTGLPPMGYVTPLQGVVPIDGSSVTSTAMQPPSLLFPQPRPKRCATHCYVARNICYHQQIARLNPFWPSLTGSASMFGAKHCISNGLPTSDFHGNLSGKNVNSLQENAQSLPIFSAQSAKDNKPPQFSAIDDVSQRKQILVQQSLPPGAPNNILQGPAFIFPLSQQRAVAAASVRPAGAVKSPTSGTVSSAASVSSSVSGSAKAAIAGPTMSFNYPNVPTNETQYLAILQNNGYSFPIPAHVGALPGYRGAHPPAMPFFNGSFYSSQMIHPPPSAQPQLSQQGPPSSTIPGCASLNQKHLQSQQSRSHASGSYGGGGGGNLQGFASKNHSSHPLQLQQAQPRQLETEIGGEESPSTPDSRVYRSNINVYGQNFAMPIYSPPKLSSINPPVPIARGGEKKHSQPQGGSKTGVEPSHAFASINGVSITPGIAPNHLMFQNLPEVVTRDGYQIMASAGAAQVAQQKKSYLDGNTMGGDNSSNVEEDRKPSAGKTPAPPIGQSIAFSRAELSDTSVSTIPGGTAMVDSSGRRPSGSVMPQMPPVISPPNTSNSQQQMQRNQQHLMLQKQQQFAAAAAAAAARNKTPPTSNGGGVYSDHLPSPSSMAAKFPNALTSFSQNIVQSNSTTSPAQSPQWKNSARATTTSQVPTQSVSSTASSTKTFSQQPNRPQQSHTQISFAANPKSSLQNQAQQSVSNQTPSPPLVVGSPTSSISKSAGGSSRLASLTPTGNKTGQASMASQQIKNSQPLPTQKSILGNPVTSSSSSVSKTQLAQQQHLSKQSLQQAQLFFSHPYMQAQASHSTSPSSPSAGSGYYLQRRRAEPQPAAHGQPSSTSAMLSLSPITLDPAKVVAVASAESNVKSGSGLSSPAILHPAQYAASYSPGMPAGFPYIHAVSTAAVQVKPAEQKQPAGE 1511
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 18785097 18790688 + BLOR04343 Blo12g00324 67585

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo12g00324 1511 MobiDBLite consensus disorder prediction 926 965 - -
Blo12g00324 1511 MobiDBLite consensus disorder prediction 870 914 - -
Blo12g00324 1511 MobiDBLite consensus disorder prediction 26 58 - -
Blo12g00324 1511 MobiDBLite consensus disorder prediction 1 121 - -
Blo12g00324 1511 MobiDBLite consensus disorder prediction 262 276 - -
Blo12g00324 1511 PANTHER PROTEIN TIME FOR COFFEE 1 1507 IPR039317 GO:0042752
Blo12g00324 1511 MobiDBLite consensus disorder prediction 1106 1134 - -
Blo12g00324 1511 MobiDBLite consensus disorder prediction 1174 1198 - -
Blo12g00324 1511 MobiDBLite consensus disorder prediction 248 354 - -
Blo12g00324 1511 MobiDBLite consensus disorder prediction 1182 1196 - -
Blo12g00324 1511 MobiDBLite consensus disorder prediction 413 451 - -
Blo12g00324 1511 MobiDBLite consensus disorder prediction 1146 1160 - -
Blo12g00324 1511 MobiDBLite consensus disorder prediction 1070 1160 - -
Blo12g00324 1511 MobiDBLite consensus disorder prediction 509 545 - -
Blo12g00324 1511 MobiDBLite consensus disorder prediction 995 1016 - -
Blo12g00324 1511 MobiDBLite consensus disorder prediction 870 965 - -
Blo12g00324 1511 MobiDBLite consensus disorder prediction 149 231 - -
Blo12g00324 1511 MobiDBLite consensus disorder prediction 85 101 - -
Blo12g00324 1511 MobiDBLite consensus disorder prediction 1221 1376 - -
Blo12g00324 1511 MobiDBLite consensus disorder prediction 176 211 - -
Blo12g00324 1511 MobiDBLite consensus disorder prediction 277 313 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo12g00324 - - - vvi:100256257 1239.17
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Blo01g00128 Blo12g00324 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo05g00360 Blo-Chr5:4346628 Blo12g00324 Blo-Chr12:18785097 2.54E-12 dispersed
Blo01g00128 Blo-Chr1:1742806 Blo12g00324 Blo-Chr12:18785097 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g474 Blo01g00128 Blo12g00324 . Bda08g00233 Bpe04g00837 . Bma04g00791 Bma05g01112 Cmo08g01126 Cmo17g00232 . . . . . . . . . . . . . . Cla06g00571 Cam06g0610 Cec06g0611 Cco06g0617 Clacu06g0597 . Cre06g1358 Cone14ag0842 . . . . . . . . . . . Bpe05g00906 . . . . . . Cma08g01150 Cma17g00246 Car08g01031 Car17g00220 Cpe12g00204 Cpe17g00142 Bhi12g01725 . . Lac12g2296 . . . . . . . . . . Lsi09g01331 . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003917 1 4 2 2 2 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 4 2 1 45
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo12g00324 Blo_Chr12 FPKM 5.882114 3.39782 7.966372 5.533958 7.089807 6.480892 4.528696 11.492956 6.215839 8.742897