Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo12g00329 ATGAATGGTGCTTTGGATTCAGAAACTGATTACTCTTCTCAATATGTTGAAGTTGACCCAACTGGAAGATATGGAAGATACGATGATGTTCTGGGCAAAGGAGCTTCGAAAACAGTGTATAAAGGTTTTGATGAATACCAAGGAATCGAAGTGGCATGGAACCAAGTAAAACTCCATGATTTTCTCCGAAACCCAGAAGATTTAGAGCGATTATACTGCGAAATCCATTTGTTGAAGACCTTAAAGCACAAAAACATAATGAAATTCCACACTTCCTGGGTCGACGCTTCTAACAGAAACATCAATTTCGTCACCGAAATGTTCACTTCCGGCACTCTCCGACAATTCAGATTAAAACATAGGAAAGTTAATGTCAGAGCAGTGAAGCAATGGTGCAGACAGATTCTGAGGGGTCTAGTCTACCTCCATAGCCACGATCCTCCCGTAATTCACAGAGACCTTAAATGTGACAACATTTTCATCAATGGAAATCAAGGGGAAGTCAAGATCGGCGATCTGGGTCTTGCTGGATTTGTAAGAAAATCTCATGCTGATCACTGTGTAGGAACACCAGAGTTCATGGCTCCAGAGGTGTATGAAGAAGAATACAATGAATTGGTGGACATCTATTCTTTTGGAATGTGTATTTTGGAAATGGTTACGCTTCAATATCCCTACTCTGAATGCACTACCCCTGCTCAGATTTACAAGAAAGTTATCTGCGGAATAAAACCGGAAGCTCTGTACAGAGTGAAAGACGAAGAAGTGAGGGAGTTTGTGGGGAAATGCTTAGCAACTCTGCCGAATAGGCCCTCGGCGAAAGCTCTATTGAAAGATTGTTTCCTTCAAATCGAAGATTACGAGACCTTTATGAGGGAAGCCGACGATATTGCTGATTTTGAAGAAGTTGGCCCGCTTCTAAGGCAACCTTTATATCAAATTCGTCCTAGTTGCGATTTTTCGTCTAATGGGTTTGGGAATCATCTCGATTTCGTGTTGGAAAATGACAAGATTGAATTGAGTGAGATTGATCTTTTTTCTGGCCATGAAGACGGCCATGTTGGCGATGTCAATATCACGATAAAAGGAAGAAGAAGAGAAGATGATGGTATCTTTTTGAGGCTCAGAAATGTGGATAAAGAAGGTCGGGTTCGAAATATCTACTTCCCCTTTGATTTAGAGACCGACACTGGCTTAAGTGTCGCATCGGAGATGGTGGCTGAGCTAGACATTACGGATCAAGATGTAACCAAAATAGCTGATATGATCAACGGAGAAATATCGACTTTGGTCCCGGATTGGAAAACCGAGCTTAGCGGAGATAGTAATATTACGAGTTTATGTCATAATTGTGCTTCGAATAGTTCCGTATCGGATTATATTTCATCCCACAATCCATGCTCCAAAACCCTTCAAGTTCTTAGGTGCTCGAAAGACGGATGTGCCTCTGTCCATGGACGTTTCGAAGAAATCATGTACCAAGTTGAAGGGTCGGAACAATGTCTCGAAGAAAATTCGAACCAGACACCAGAAAGATCTGAAAAGTATGCTGATATTTGGGCACAAAGAGATGGAGCGGAGTTGAAATTGGACGAAAAATCAGAGAAGGAAGGAGAAACTATGGATCGAGAGAAACAAGCCGAGATTAACGAAGAAGACTCGTTTTCTTTTGCTTTCTCTGATGCTTGTGAAAATGAAATCAGACAAGAGCTTAGATGGCTCAAAGCCAAGTATCAAATGCAGCTGAGAGAGCTCAAGAACCAGCAACTCATGGCGGTAACCAAGTGTTCGAGTTTGAATGGAAACCTGGGAGATTCGACATTCGAGATTTCACCACATGTGGAGAAAATTCATAGTGGTCGGCGGGTTATCGGTGTCAATGACAAAGACGAAGACGACGGCAGTGATTCATTCAAGCTGGAGTTCAGGACATCTAAGAGTTTCTACAGTGGAGATTTAAGTTCTCTTCACAGAGCAACCTCCCTGCCCGTTGATGCTGTACATATAAATAAAGTAATCATAATACAAGGTGGGATCAGCGTTTGTGTTGTTCGCATGGGAATTGAGTCGACGAAGGCGGTTCGGCGTTGGGGATTTTCGGTGACTGGATCGCCTAATTTCTCAAGAGAGACCGTGAGATCTGGTGGCTCTTCTGGTGTCGTGGTGAAGAAGAGGGACTCCTCGGGTTCTCTAATTGTTAAAAAGAAAGGGGATGGGGTGGGAGGCTCGAGTTCCGGAGTGGCGTTGAATTCCAAGAAGGAGAAGAAGAGGCGAAGGTTGCCTGTTACTCATTCCGAATCAAGCGATGAGAAAGTAGTGGCTCCTCAAAGACGGGTTGGTCGAGAAAGCCTTCAGGTTTGTCATAGTTTAAATGCTTTTGAAAAAAGTAGTGAGGAGGAAGATGAAATTGAAAGAGTGAAGAATAGTTTGGAATATAGTAGGGGTAATGATGATAGCATGACGAGGAGGAATATCAAGAGTGAGACTCAAAGAAATGGAAGTAGGTTAGATGTTTTCGAGTTCAATGAGTATGATGGAGTTGGAGAGAAGTTTCGGGTGAGTCAATTTAATAATATTGGTGTCGAGGTTGGGGAAAGAAGACTTCCAGGATCAGTGCACTTGTCTCGAAATGGTGATGAGAGGGCATTTAAAGCTGGTTCTAGTAGACACATGATTGATAAGAGAACAGGAAATTATAATGATCGTTCTGGTGGCTTGAGTAGGGATAGTCGTGCTAGTAGGAGTAACCATAAAGATGGCGCACAGGTTCCCGTATCATATTTGAGAGACAAATTCATGACTCCCTCTGATGAGCCAATCAGGGTTCAGGGAAAAAATGGCGTGTTAAAGGTTATGGTAAATAAAAAGAGAAATATGGATGTTCTTGATATTAATGATCACCGGAAAGGTGAGGAAAATGACAAGAGTTCAAATGAAGATGCTCCAAAAATAAATGTTTCAATCACTCCTATGGTTCATTCAGAAATAAAATACTTCAAAAGACGAGGTCGGTTAATTACTAGCTCTGAGAGGGATCAAATAAATTCGAGAACATCATTTCCAACTAACAAGGGTAAAAGCAGTGGTTGGGACTCAGATGATAGTAACATTTCATTGAATCCTGAATCAGAGTCTGTAGAAGCTCGAAAAACTGCAAAAATGAAAAGCTGTGAAATTGAAAAAACTCCAAGTGAAAGGGTTCCTCGAAATGCAATAAAAGAAGCAAAAGTTAAACGTGGTAGTGGCACTGAAAAGCAAAAACTCCGTGAACAGATCAGGGAAATGCTCATCAATGCTGGATGGACCATTGATTACAGGCCTCGGAGGAACAGAGACTATCTAGATGCTGTGTATATTAATCCTAGTGGAACAGCTTATTGGTCAATCATTAAAGCTTATGATGCACTTCAAAAGCAATCACATGGAGAGGATAATGAGGTTAGACCTAGTGTTGACTGTTCTTCATTCATGCCAATAGCAGATGAGTTACTAAGCCAATTGACGAGAAACACTCGTAAGAAGATTGAGAAAGAATTTAAAAAGAAGCAGAGAGACTCCAAGAATAGTGAAAAGGTCAAACGAAAGGGTGGAAGAAAATCTGCCAGTTGTAAATATAATGTGGAGAGCATGGACAGCAATGAAGAAAAGCTTAGCTTATTCATTAAGCATGGCAGTAAATCGCTGAAGAGTAGAGTAAATGAAGATGATGTTTCTACAGTGAACTTGAAAGGTCAGAATTCTAGTAATCACTTGCACGATAATGTTGAAATATCATCTTTTGGATCTAACTCCCGCATTCTTCAAGGAAGAAAAAGAAGAAAACTTGGGTTGTTGGTTCGCGGTTCCAACAAGGGACCAAATTCAGATGATGGCTTTGTTCCTTATACTGGAAAAAGAACACTGCTTTCCTGGCTGATTGACTCTGACACCGTGCATTTAAGCCAAAAAGTTCGATACATGAACCGCAGACAAACAAGAGTAATGCTAGAGGGCTGGGTTACAAGAGATGGTATTCATTGTAGTTGCTGTAGTAAAATTCTTACTCTTTCAAAGTTTGACCTACATGCTGGTAGTAAACTTCGTCAGCCTTTTCAAAACATAATTTTGGAATCTGGGGTCTCTCTTTTGCAATGTCAAATAGATGCATGGAATAGACAAGAGGACTCCAAACGTCTCAGTTTCTACTCTATTGAAATTGATGGTGATGATCCAAATGATGATACATGTGGCATTTGTGGAGATGGTGGGGATTTAATATGTTGTGATGGTTGTCCATCAACTTTTCATCAGGGCTGTTTAGACATACAGATTCCTTCTGGTGATTGGCATTGCCCAAATTGTACTTGCAAATTTTGTGGCAGTGGAGATGATTTTGAACTAGATGATTCTTCTGCTACTGGGCTTAGTGTTTGCACGATGTGTGAGAAAAAATATCACATATCGTGCATCCAGGATATGGATTCTGGTATTCGTCTCAGTGGCTTACAGATGCCCTTTTGTGGGCAGAAATGCCAAGAGCTCTTTGGACAGTTGCAAAAATATCTTGGCGTCAAGCATGATCTAGATGGAGGATTTTCATGGTCACTTATTCGTAGAAGGGACGAAGACTGTGATACATCAGTTCATGGACTTCTTCACCGTGTGGAATGCAATTCTAAGCTAGCTGTTGCATTAACAGTTATGGATGAATGCTTTTTACCTGTTGTCGACAGGAGGAGTGGGATCAACTTAATCCATAATGTTCTGTATAATTGTGGATCGAATTTTAATCGGCTCAATTATAGTGGCTTTTACTCTGCTATTTTGGAGAGGGGTGATGAAATTATCTCTGTCGCATCTATCAGGTTCCACGGGACAAAGTTAGTGGAGATGCCCTATATAGGCACTCGACATATTTATAGACGTCAAGGAATGTGCCGTCGGCTTTTTTGTGCAATTGAAGCAGCTCTCCGCTCATTTAAGGTCGAAAAACTAATTATTCCTGCAATTGCTGAACTCATGCATACATGGACTGTGGTTTTTGGTTTTACTCCTCTAGAAGAGTCACTTAAGCAAGAAATGAGGTCAATGAACATGTTAGTGTTCCCGGGTACGGATATGTTACAGAAGGAGCTTATGGGAAAAGAATCTATGCACGAGAATGTCACTTCAAGCTCAGGTGGAAAGGCTCTGGGGAGTAAGGGCAAGCAGTACACAAGGTCTCCTGTGCCAAGGAAAGTGGAAACTGAATTATCACCCAAGAAGGATACTGGTTGTGATGATACCGATCTCAATCACTTGAATGGGGTAACGGATGAAATAACTGCTGTAAATTCTAGTGCTGAAAATCTGGTTGTTTCTTCAGTTGTGAGCAATCATTTGGATGCTTCTCACGAGGTACAAACTTCAGTGTTGATTGAGGGGGCTGTAAATTTAGACTCTCATTCTGAGGATAAATTTCTTGCATCTGCTTCCCTATTGAATTTATCTGCATCTGATATGGATCATAGATCGCCTGCAATGGAAACTAAACTGGCATCAGATTCTGCCATGGTAGATTGCAAGTCTTCCATTCAATTCCTTGATGTTTCCTTAAATGATAACTCCTTAACAAGTGATGCTTCAGAAGCTTCCCGTGAGGTTAATATTGAACCATCAATGGAAGGACATGAAGTACCGACTGTTGGTAGAATCAACATGGAATCTCCTTCTCCCTTTACAGATAACAATGCGCATGAGGACAAAAATGAGCCAGCAATAGGAACTTCCTCTGAAAATGATGGAAACTCCTCTAATAGTTGGGAGGTACAGAACACCAGCAAGATCAATGCTAAAGTGGAGGATCTTGAATCTACTCGGTCTGTAGAAAATTTTTCTGGGAATCATGTTGATGAACTCGGTGAAAATCCAGGTGCTTCTGCTGTCAGTTTCAACTGGGCTAGTGAGATTCCAATTGAAATTAAACCTGTTTTGAATAATAAAACTGCAACTGAGGTAGATGGCATGTTGCTTGTTTCTTCAGAAGCTGCTTCTGATGCTCTGCATTGGAACGGGAAATGTCTTGCTGCATCTGGTGAAAGTTGTAGTAAAGATGAACTGGAAAAATTGAATCGAAAATAA 6099 41.07 MNGALDSETDYSSQYVEVDPTGRYGRYDDVLGKGASKTVYKGFDEYQGIEVAWNQVKLHDFLRNPEDLERLYCEIHLLKTLKHKNIMKFHTSWVDASNRNINFVTEMFTSGTLRQFRLKHRKVNVRAVKQWCRQILRGLVYLHSHDPPVIHRDLKCDNIFINGNQGEVKIGDLGLAGFVRKSHADHCVGTPEFMAPEVYEEEYNELVDIYSFGMCILEMVTLQYPYSECTTPAQIYKKVICGIKPEALYRVKDEEVREFVGKCLATLPNRPSAKALLKDCFLQIEDYETFMREADDIADFEEVGPLLRQPLYQIRPSCDFSSNGFGNHLDFVLENDKIELSEIDLFSGHEDGHVGDVNITIKGRRREDDGIFLRLRNVDKEGRVRNIYFPFDLETDTGLSVASEMVAELDITDQDVTKIADMINGEISTLVPDWKTELSGDSNITSLCHNCASNSSVSDYISSHNPCSKTLQVLRCSKDGCASVHGRFEEIMYQVEGSEQCLEENSNQTPERSEKYADIWAQRDGAELKLDEKSEKEGETMDREKQAEINEEDSFSFAFSDACENEIRQELRWLKAKYQMQLRELKNQQLMAVTKCSSLNGNLGDSTFEISPHVEKIHSGRRVIGVNDKDEDDGSDSFKLEFRTSKSFYSGDLSSLHRATSLPVDAVHINKVIIIQGGISVCVVRMGIESTKAVRRWGFSVTGSPNFSRETVRSGGSSGVVVKKRDSSGSLIVKKKGDGVGGSSSGVALNSKKEKKRRRLPVTHSESSDEKVVAPQRRVGRESLQVCHSLNAFEKSSEEEDEIERVKNSLEYSRGNDDSMTRRNIKSETQRNGSRLDVFEFNEYDGVGEKFRVSQFNNIGVEVGERRLPGSVHLSRNGDERAFKAGSSRHMIDKRTGNYNDRSGGLSRDSRASRSNHKDGAQVPVSYLRDKFMTPSDEPIRVQGKNGVLKVMVNKKRNMDVLDINDHRKGEENDKSSNEDAPKINVSITPMVHSEIKYFKRRGRLITSSERDQINSRTSFPTNKGKSSGWDSDDSNISLNPESESVEARKTAKMKSCEIEKTPSERVPRNAIKEAKVKRGSGTEKQKLREQIREMLINAGWTIDYRPRRNRDYLDAVYINPSGTAYWSIIKAYDALQKQSHGEDNEVRPSVDCSSFMPIADELLSQLTRNTRKKIEKEFKKKQRDSKNSEKVKRKGGRKSASCKYNVESMDSNEEKLSLFIKHGSKSLKSRVNEDDVSTVNLKGQNSSNHLHDNVEISSFGSNSRILQGRKRRKLGLLVRGSNKGPNSDDGFVPYTGKRTLLSWLIDSDTVHLSQKVRYMNRRQTRVMLEGWVTRDGIHCSCCSKILTLSKFDLHAGSKLRQPFQNIILESGVSLLQCQIDAWNRQEDSKRLSFYSIEIDGDDPNDDTCGICGDGGDLICCDGCPSTFHQGCLDIQIPSGDWHCPNCTCKFCGSGDDFELDDSSATGLSVCTMCEKKYHISCIQDMDSGIRLSGLQMPFCGQKCQELFGQLQKYLGVKHDLDGGFSWSLIRRRDEDCDTSVHGLLHRVECNSKLAVALTVMDECFLPVVDRRSGINLIHNVLYNCGSNFNRLNYSGFYSAILERGDEIISVASIRFHGTKLVEMPYIGTRHIYRRQGMCRRLFCAIEAALRSFKVEKLIIPAIAELMHTWTVVFGFTPLEESLKQEMRSMNMLVFPGTDMLQKELMGKESMHENVTSSSGGKALGSKGKQYTRSPVPRKVETELSPKKDTGCDDTDLNHLNGVTDEITAVNSSAENLVVSSVVSNHLDASHEVQTSVLIEGAVNLDSHSEDKFLASASLLNLSASDMDHRSPAMETKLASDSAMVDCKSSIQFLDVSLNDNSLTSDASEASREVNIEPSMEGHEVPTVGRINMESPSPFTDNNAHEDKNEPAIGTSSENDGNSSNSWEVQNTSKINAKVEDLESTRSVENFSGNHVDELGENPGASAVSFNWASEIPIEIKPVLNNKTATEVDGMLLVSSEAASDALHWNGKCLAASGESCSKDELEKLNRK 2032
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 18887379 18898144 + BLOR04348 Blo12g00329 67590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo12g00329 2032 MobiDBLite consensus disorder prediction 1889 1929 - -
Blo12g00329 2032 PANTHER PHD FINGER FAMILY PROTEIN 710 1936 - -
Blo12g00329 2032 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1397 1488 IPR013083 -
Blo12g00329 2032 MobiDBLite consensus disorder prediction 1734 1755 - -
Blo12g00329 2032 SUPERFAMILY Protein kinase-like (PK-like) 19 282 IPR011009 -
Blo12g00329 2032 MobiDBLite consensus disorder prediction 1708 1757 - -
Blo12g00329 2032 MobiDBLite consensus disorder prediction 1711 1725 - -
Blo12g00329 2032 MobiDBLite consensus disorder prediction 1914 1929 - -
Blo12g00329 2032 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 1595 1665 IPR016181 -
Blo12g00329 2032 SMART PHD_3 1408 1448 IPR001965 -
Blo12g00329 2032 SMART PHD_3 1449 1505 IPR001965 -
Blo12g00329 2032 Pfam Tify domain binding domain 1331 1381 IPR032308 -
Blo12g00329 2032 Pfam PHD-finger 1409 1450 IPR019787 -
Blo12g00329 2032 CDD PHD2_CHD_II 1409 1447 - -
Blo12g00329 2032 SUPERFAMILY FYVE/PHD zinc finger 1399 1452 IPR011011 -
Blo12g00329 2032 Pfam Protein kinase domain 29 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo12g00329 2032 MobiDBLite consensus disorder prediction 1009 1045 - -
Blo12g00329 2032 MobiDBLite consensus disorder prediction 1009 1065 - -
Blo12g00329 2032 MobiDBLite consensus disorder prediction 1177 1204 - -
Blo12g00329 2032 MobiDBLite consensus disorder prediction 1046 1065 - -
Blo12g00329 2032 ProSitePatterns Serine/Threonine protein kinases active-site signature. 149 161 IPR008271 GO:0004672|GO:0006468
Blo12g00329 2032 SMART serkin_6 25 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo12g00329 2032 MobiDBLite consensus disorder prediction 892 921 - -
Blo12g00329 2032 CDD STKc_WNK 23 282 - -
Blo12g00329 2032 MobiDBLite consensus disorder prediction 732 774 - -
Blo12g00329 2032 PANTHER ACYL-COA N-ACYLTRANSFERASE WITH RING/FYVE/PHD-TYPE ZINC FINGER PROTEIN 710 1936 - -
Blo12g00329 2032 MobiDBLite consensus disorder prediction 1177 1196 - -
Blo12g00329 2032 ProSiteProfiles Zinc finger PHD-type profile. 1406 1450 IPR019787 -
Blo12g00329 2032 Coils Coil 568 588 - -
Blo12g00329 2032 Gene3D Transferase(Phosphotransferase) domain 1 108 287 - -
Blo12g00329 2032 MobiDBLite consensus disorder prediction 760 774 - -
Blo12g00329 2032 ProSiteProfiles Protein kinase domain profile. 25 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo12g00329 2032 ProSitePatterns Zinc finger PHD-type signature. 1409 1447 IPR019786 -
Blo12g00329 2032 Gene3D Phosphorylase Kinase; domain 1 9 106 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g00658 Blo-Chr3:28010392 Blo12g00329 Blo-Chr12:18887379 4.73E-100 dispersed
Blo08g00031 Blo-Chr8:270876 Blo12g00329 Blo-Chr12:18887379 1.18E-09 dispersed
Blo09g00531 Blo-Chr9:16520070 Blo12g00329 Blo-Chr12:18887379 3.39E-44 dispersed
Blo12g00329 Blo-Chr12:18887379 Blo18g00578 Blo-Chr18:8400628 0 dispersed
Blo14g00080 Blo-Chr14:587198 Blo12g00329 Blo-Chr12:18887379 3.00E-51 dispersed
Blo14g00207 Blo-Chr14:1750314 Blo12g00329 Blo-Chr12:18887379 4.74E-45 dispersed
Blo04g00716 Blo-Chr4:6599069 Blo12g00329 Blo-Chr12:18887379 8.67E-161 transposed
Blo06g00440 Blo-Chr6:25140231 Blo12g00329 Blo-Chr12:18887379 0 transposed
Blo09g00297 Blo-Chr9:12673059 Blo12g00329 Blo-Chr12:18887379 1.06E-131 transposed
Blo13g01016 Blo-Chr13:32507392 Blo12g00329 Blo-Chr12:18887379 4.72E-143 transposed
Blo01g00125 Blo-Chr1:1690653 Blo12g00329 Blo-Chr12:18887379 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12988 PF00069 Pkinase 1.00E-46 CL0016 Blo TR
84568 PF00069 Pkinase 1.00E-46 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo12g00329 - - csv:101210263 1213.36